Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G58.14 Capsicum annuum HOM05D000614 ORTHO05D115771 7.4e-66 253.8 138 100.0
CAN.G1024.4 Capsicum annuum HOM05D000614 ORTHO05D000463 1.5e-37 159.8 121 71.9
CAN.G1024.3 Capsicum annuum HOM05D000614 ORTHO05D000463 1.4e-35 153.3 121 71.1
CAN.G1024.2 Capsicum annuum HOM05D000614 ORTHO05D000463 4.4e-34 148.3 119 70.6
CAN.G58.3 Capsicum annuum HOM05D000614 ORTHO05D011063 3.3e-29 132.1 96 71.9
Nitab4.5_0004436g0040 Nicotiana tabacum HOM05D000614 ORTHO05D000463 8.3e-25 117.5 122 57.4
Nitab4.5_0002151g0020 Nicotiana tabacum HOM05D000614 ORTHO05D000463 1.8e-24 116.3 121 56.2
Peaxi162Scf00541g00068 Petunia axillaris HOM05D000614 ORTHO05D000463 2.3e-22 109.4 121 53.7
PGSC0003DMG400023050 Solanum tuberosum HOM05D000614 ORTHO05D000463 1.0e-19 100.5 150 42.0
Nitab4.5_0000343g0010 Nicotiana tabacum HOM05D000614 ORTHO05D000463 1.4e-19 100.1 122 50.0
CAN.G66.10 Capsicum annuum HOM05D000614 ORTHO05D000463 8.9e-19 97.4 119 50.4
Nitab4.5_0000343g0030 Nicotiana tabacum HOM05D000614 ORTHO05D000463 1.2e-18 97.1 115 51.3
Nitab4.5_0001488g0060 Nicotiana tabacum HOM05D000614 ORTHO05D000463 1.2e-18 97.1 122 48.4
Nitab4.5_0001488g0050 Nicotiana tabacum HOM05D000614 ORTHO05D000463 3.4e-18 95.5 122 46.7
Nitab4.5_0000343g0020 Nicotiana tabacum HOM05D000614 ORTHO05D000463 5.8e-18 94.7 122 48.4
Nitab4.5_0000417g0040 Nicotiana tabacum HOM05D000614 ORTHO05D000463 2.4e-16 89.4 121 48.8
Cc11_g13250 Coffea canephora HOM05D000614 ORTHO05D000463 2.7e-15 85.9 120 43.3
Nitab4.5_0003971g0020 Nicotiana tabacum HOM05D000614 ORTHO05D000463 3.5e-15 85.5 121 46.3
MSTRG.688 Avicennia marina HOM05D000614 ORTHO05D000463 1.9e-13 79.7 120 42.5
PGSC0003DMG400002826 Solanum tuberosum HOM05D000614 ORTHO05D000463 5.6e-13 78.2 119 44.5
Oeu020866.1 Olea europaea HOM05D000614 ORTHO05D000463 7.3e-13 77.8 120 41.7
CAN.G58.8 Capsicum annuum HOM05D000614 ORTHO05D000463 4.7e-12 75.1 67 58.2
Hma1.2p1_0265F.1_g106650 Hydrangea macrophylla HOM05D000614 ORTHO05D000463 8.1e-12 74.3 121 42.1
Sopen04g001720 Solanum pennellii HOM05D000614 ORTHO05D000463 8.1e-12 74.3 119 42.9
Solyc04g005670.3 Solanum lycopersicum HOM05D000614 ORTHO05D000463 1.4e-11 73.6 119 42.9
Hma1.2p1_0598F.1_g186740 Hydrangea macrophylla HOM05D000614 ORTHO05D000463 2.3e-11 72.8 120 38.3
Prupe.5G189400 Prunus persica HOM05D000614 ORTHO05D000463 2.3e-11 72.8 124 42.7
Medtr8g468030 Medicago truncatula HOM05D000614 ORTHO05D000463 3.1e-11 72.4 140 39.3
Migut.L01313 Erythranthe guttata HOM05D000614 ORTHO05D000463 5.2e-11 71.6 121 43.8
unitig_747.g21175 Utricularia gibba HOM05D000614 ORTHO05D000463 6.8e-11 71.2 120 40.8
Oeu045410.1 Olea europaea HOM05D000614 ORTHO05D000463 8.9e-11 70.9 118 41.5
Actinidia19049 Actinidia chinensis HOM05D000614 ORTHO05D000463 1.2e-10 70.5 119 42.0
DCAR_007145 Daucus carota HOM05D000614 ORTHO05D000463 1.2e-10 70.5 120 39.2
ECA234G1648 Erigeron canadensis HOM05D000614 ORTHO05D000463 1.2e-10 70.5 121 38.0
Aqoxy3G03337 Aquilegia oxysepala HOM05D000614 ORTHO05D000463 2.0e-10 69.7 119 41.2
Ca_27501_v3 Cicer arietinum L. HOM05D000614 ORTHO05D000463 2.0e-10 69.7 148 35.1
MD14G1197300 Malus domestica HOM05D000614 ORTHO05D000463 4.4e-10 68.6 124 38.7
Psat4g138280 Pisum sativum HOM05D000614 ORTHO05D000463 7.5e-10 67.8 80 50.0
CSS0004208 Camellia sinensis var. sinensis HOM05D000614 ORTHO05D000463 9.8e-10 67.4 122 41.8
Oeu001577.1 Olea europaea HOM05D000614 ORTHO05D000463 1.3e-09 67.0 118 41.5
MSTRG.7813 Avicennia marina HOM05D000614 ORTHO05D000463 1.7e-09 66.6 120 37.5
Lsat_1_v5_gn_8_51861 Lactuca sativa HOM05D000614 ORTHO05D000463 2.2e-09 66.2 121 38.8
Peaxi162Scf00101g00212 Petunia axillaris HOM05D000614 ORTHO05D000463 2.2e-09 66.2 122 40.2
Psat2g121720 Pisum sativum HOM05D000614 ORTHO05D000463 2.2e-09 66.2 142 36.6
Lj1g0004827 Lotus japonicus HOM05D000614 ORTHO05D000463 2.9e-09 65.9 124 37.9
DCAR_027403 Daucus carota HOM05D000614 ORTHO05D000463 3.7e-09 65.5 127 36.2
TAR374G1663 Trochodendron aralioides HOM05D000614 ORTHO05D000463 4.9e-09 65.1 118 40.7
Nn4g23102 Nelumbo nucifera HOM05D000614 ORTHO05D000463 6.4e-09 64.7 120 39.2
unitig_699.g19917 Utricularia gibba HOM05D000614 ORTHO05D000463 6.4e-09 64.7 119 38.7
CSS0000033 Camellia sinensis var. sinensis HOM05D000614 ORTHO05D000463 8.3e-09 64.3 127 40.9
Dinv38686 Davidia involucrata HOM05D000614 ORTHO05D000463 8.3e-09 64.3 119 39.5
Sopen05g003180 Solanum pennellii HOM05D000614 ORTHO05D000463 8.3e-09 64.3 55 61.8
MSTRG.13411 Avicennia marina HOM05D000614 ORTHO05D000463 1.1e-08 63.9 119 41.2
DCAR_031031 Daucus carota HOM05D000614 ORTHO05D000463 1.1e-08 63.9 120 37.5
Lsat_1_v5_gn_4_10141 Lactuca sativa HOM05D000614 ORTHO05D000463 1.1e-08 63.9 135 34.8
MD16G1075300 Malus domestica HOM05D000614 ORTHO05D000463 1.1e-08 63.9 123 38.2
HanXRQChr12g0382921 Helianthus annuus HOM05D000614 ORTHO05D000463 1.4e-08 63.5 121 38.8
TPR.G33245 Trifolium pratense HOM05D000614 ORTHO05D000463 1.4e-08 63.5 86 46.5
Solyc05g007220.4 Solanum lycopersicum HOM05D000614 ORTHO05D000463 1.9e-08 63.2 55 60.0
Actinidia31200 Actinidia chinensis HOM05D000614 ORTHO05D000463 2.4e-08 62.8 117 38.5
CiPaw.11G041900 Carya illinoinensis HOM05D000614 ORTHO05D000463 2.4e-08 62.8 123 39.8
Dinv16628 Davidia involucrata HOM05D000614 ORTHO05D000463 2.4e-08 62.8 113 38.9
Oeu013627.1 Olea europaea HOM05D000614 ORTHO05D000463 2.4e-08 62.8 120 40.0
Ca_24228_v3 Cicer arietinum L. HOM05D000614 ORTHO05D000463 3.2e-08 62.4 123 39.0
Nitab4.5_0001488g0070 Nicotiana tabacum HOM05D000614 ORTHO05D000463 3.2e-08 62.4 121 38.8
Oeu028299.1 Olea europaea HOM05D000614 ORTHO05D000463 3.2e-08 62.4 120 38.3
Phvul.009G189100 Phaseolus vulgaris HOM05D000614 ORTHO05D000463 3.2e-08 62.4 124 38.7
Nitab4.5_0010552g0020 Nicotiana tabacum HOM05D000614 ORTHO05D000463 5.4e-08 61.6 119 38.7
CAN.G1305.10 Capsicum annuum HOM05D000614 ORTHO05D000463 7.1e-08 61.2 119 38.7
Lj2g0018294 Lotus japonicus HOM05D000614 ORTHO05D000463 7.1e-08 61.2 148 33.8
Hma1.2p1_0735F.1_g210400 Hydrangea macrophylla HOM05D000614 ORTHO05D000463 9.2e-08 60.8 119 39.5
FAN22G1623 Fragaria x ananassa HOM05D000614 ORTHO05D000463 1.2e-07 60.5 123 36.6
THA.LOC104805150 Tarenaya hassleriana HOM05D000614 ORTHO05D000463 1.2e-07 60.5 96 40.6
HanXRQChr05g0152301 Helianthus annuus HOM05D000614 ORTHO05D000463 1.6e-07 60.1 119 37.0
Rhsim12G0131900 Rhododendron simsii HOM05D000614 ORTHO05D000463 1.6e-07 60.1 119 39.5
Actinidia34988 Actinidia chinensis HOM05D000614 ORTHO05D000463 2.1e-07 59.7 119 39.5
Glyma.04G172300 Glycine max HOM05D000614 ORTHO05D000463 2.1e-07 59.7 122 35.2
Glyma.06G191900 Glycine max HOM05D000614 ORTHO05D000463 2.1e-07 59.7 120 35.0
Eucgr.B03422 Eucalyptus grandis HOM05D000614 ORTHO05D000463 2.7e-07 59.3 84 44.0
FAN07G1028 Fragaria x ananassa HOM05D000614 ORTHO05D000463 2.7e-07 59.3 123 35.8
FAN17G0787 Fragaria x ananassa HOM05D000614 ORTHO05D000463 2.7e-07 59.3 123 36.6
Medtr5g039390 Medicago truncatula HOM05D000614 ORTHO05D000463 2.7e-07 59.3 143 32.9
VMungo1309G0186 Vigna mungo HOM05D000614 ORTHO05D000463 2.7e-07 59.3 120 35.8
TWI81G0350 Tripterygium wilfordii HOM05D000614 ORTHO05D000463 3.5e-07 58.9 77 45.5
AUR62028808 Chenopodium quinoa HOM05D000614 ORTHO05D000463 4.6e-07 58.5 121 37.2
Duzib068G0975 Durio zibethinus HOM05D000614 ORTHO05D000463 4.6e-07 58.5 119 36.1
Gohir.D07G075300 Gossypium hirsutum HOM05D000614 ORTHO05D000463 4.6e-07 58.5 56 53.6
Sopen03g032080 Solanum pennellii HOM05D000614 ORTHO05D000463 4.6e-07 58.5 119 37.8
unitig_26.g10307 Utricularia gibba HOM05D000614 ORTHO05D000463 4.6e-07 58.5 121 38.0
GSVIVG01008033001 Vitis vinifera HOM05D000614 ORTHO05D000463 4.6e-07 58.5 119 38.7
RhsimUnG0099300 Rhododendron simsii HOM05D000614 ORTHO05D000463 6.0e-07 58.2 57 54.4
RcHm_v2.0_Chr1g0373981 Rosa chinensis HOM05D000614 ORTHO05D000463 6.0e-07 58.2 120 34.2
Solyc03g113010.3 Solanum lycopersicum HOM05D000614 ORTHO05D000463 6.0e-07 58.2 119 37.8
Thecc.03G083100 Theobroma cacao HOM05D000614 ORTHO05D000463 6.0e-07 58.2 119 37.0
unitig_699.g19500 Utricularia gibba HOM05D000614 ORTHO05D000463 6.0e-07 58.2 113 38.1
Cpa.g.sc183.34 Carica papaya HOM05D000614 ORTHO05D000463 7.8e-07 57.8 58 51.7
Eucgr.G02517 Eucalyptus grandis HOM05D000614 ORTHO05D000463 7.8e-07 57.8 58 46.6
FvH4_4g31561 Fragaria vesca HOM05D000614 ORTHO05D000463 7.8e-07 57.8 123 36.6
FAN12G2430 Fragaria x ananassa HOM05D000614 ORTHO05D000463 7.8e-07 57.8 123 36.6
Rhsim12G0157600 Rhododendron simsii HOM05D000614 ORTHO05D000463 7.8e-07 57.8 55 56.4
A02p33160 Brassica napus HOM05D000614 ORTHO05D000463 1.0e-06 57.4 118 35.6
A09p24040 Brassica napus HOM05D000614 ORTHO05D000463 1.0e-06 57.4 87 41.4
BraA02t08339Z Brassica rapa HOM05D000614 ORTHO05D000463 1.0e-06 57.4 118 35.6
BraA09t38004Z Brassica rapa HOM05D000614 ORTHO05D000463 1.0e-06 57.4 87 41.4
Lj6P791T12 Lonicera japonica HOM05D000614 ORTHO05D000463 1.0e-06 57.4 58 50.0
Sc12g0006260 Simmondsia chinensis HOM05D000614 ORTHO05D000463 1.0e-06 57.4 121 38.0
C02p50970 Brassica napus HOM05D000614 ORTHO05D000463 1.3e-06 57.0 118 35.6
BolC2t11189H Brassica oleracea HOM05D000614 ORTHO05D000463 1.3e-06 57.0 118 35.6
CsaV3_5G032540 Cucumis sativus L. HOM05D000614 ORTHO05D000463 1.3e-06 57.0 128 34.4
Dinv34171 Davidia involucrata HOM05D000614 ORTHO05D000463 1.3e-06 57.0 107 38.3
Thhalv10004163m.g Eutrema salsugineum HOM05D000614 ORTHO05D000463 1.3e-06 57.0 57 50.9
VMungo1215G2204 Vigna mungo HOM05D000614 ORTHO05D000463 1.3e-06 57.0 54 53.7
CANSAT64G2919 Cannabis sativa HOM05D000614 ORTHO05D000463 1.7e-06 56.6 115 35.7
Haze_07349 Corylus avellana HOM05D000614 ORTHO05D000463 1.7e-06 56.6 58 51.7
MELO3C027345.2 Cucumis melo HOM05D000614 ORTHO05D000463 1.7e-06 56.6 125 35.2
Duzib205G1273 Durio zibethinus HOM05D000614 ORTHO05D000463 1.7e-06 56.6 119 34.5
PSO063G2374 Papaver somniferum HOM05D000614 ORTHO05D000463 1.7e-06 56.6 124 35.5
Dinv19936 Davidia involucrata HOM05D000614 ORTHO05D000463 2.3e-06 56.2 119 36.1
PGR102G1688 Punica granatum HOM05D000614 ORTHO05D000463 2.3e-06 56.2 119 35.3
Actinidia04033 Actinidia chinensis HOM05D000614 ORTHO05D000463 3.0e-06 55.8 53 54.7
Oeu054899.1 Olea europaea HOM05D000614 ORTHO05D000463 3.0e-06 55.8 81 42.0
TAR371G0779 Trochodendron aralioides HOM05D000614 ORTHO05D000463 3.0e-06 55.8 119 35.3
Zm00001eb194450 Zea mays HOM05D000614 ORTHO05D000463 3.0e-06 55.8 96 39.6
AT2G02870 Arabidopsis thaliana HOM05D000614 ORTHO05D000463 3.9e-06 55.5 123 39.8
AUR62005752 Chenopodium quinoa HOM05D000614 ORTHO05D000463 3.9e-06 55.5 125 35.2
COL.COLO4_38448 Corchorus olitorius HOM05D000614 ORTHO05D000463 3.9e-06 55.5 52 53.8
MD13G1074100 Malus domestica HOM05D000614 ORTHO05D000463 3.9e-06 55.5 121 33.1
Manes.01G187600 Manihot esculenta HOM05D000614 ORTHO05D000463 3.9e-06 55.5 57 52.6
PSO832G4455 Papaver somniferum HOM05D000614 ORTHO05D000463 3.9e-06 55.5 124 34.7
Atru.chr11.1826 Acer truncatum HOM05D000614 ORTHO05D000463 5.1e-06 55.1 79 43.0
Ah.02g131230 Amaranthus hybridus HOM05D000614 ORTHO05D000463 5.1e-06 55.1 120 39.2
Ah.03g135250 Amaranthus hybridus HOM05D000614 ORTHO05D000463 5.1e-06 55.1 117 36.8
BcaC03g17174 Brassica carinata HOM05D000614 ORTHO05D000463 5.1e-06 55.1 119 37.0
CiPaw.06G083000 Carya illinoinensis HOM05D000614 ORTHO05D000463 5.1e-06 55.1 123 35.8
Duzib084G0456 Durio zibethinus HOM05D000614 ORTHO05D000463 5.1e-06 55.1 56 50.0
Gohir.A05G305200 Gossypium hirsutum HOM05D000614 ORTHO05D000463 5.1e-06 55.1 42 64.3
Gohir.D05G304500 Gossypium hirsutum HOM05D000614 ORTHO05D000463 5.1e-06 55.1 42 64.3
Gorai.009G324100 Gossypium raimondii HOM05D000614 ORTHO05D000463 5.1e-06 55.1 42 64.3
Os03g0171600 Oryza sativa ssp. japonica HOM05D000614 ORTHO05D000463 5.1e-06 55.1 124 33.9
RcHm_v2.0_Chr1g0373971 Rosa chinensis HOM05D000614 ORTHO05D000463 5.1e-06 55.1 116 34.5
PGSC0003DMG400018088 Solanum tuberosum HOM05D000614 ORTHO05D000463 5.1e-06 55.1 119 37.0
Gohir.D13G073200 Gossypium hirsutum HOM05D000614 ORTHO05D000463 6.6e-06 54.7 59 52.5
Gorai.013G083900 Gossypium raimondii HOM05D000614 ORTHO05D000463 6.6e-06 54.7 59 52.5
Nitab4.5_0000785g0030 Nicotiana tabacum HOM05D000614 ORTHO05D000463 6.6e-06 54.7 119 37.8
Phvul.002G088200 Phaseolus vulgaris HOM05D000614 ORTHO05D000463 6.6e-06 54.7 53 52.8
QL10p016232 Quercus lobata HOM05D000614 ORTHO05D000463 6.6e-06 54.7 120 35.0
unitig_749.g13233 Utricularia gibba HOM05D000614 ORTHO05D000463 6.6e-06 54.7 118 36.4
VMungo0251G1746 Vigna mungo HOM05D000614 ORTHO05D000463 6.6e-06 54.7 54 51.9
COL.COLO4_22980 Corchorus olitorius HOM05D000614 ORTHO05D000463 8.6e-06 54.3 57 54.4
TAR622G1387 Trochodendron aralioides HOM05D000614 ORTHO05D000463 8.6e-06 54.3 52 55.8


User provided reference genes

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