Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1690.1 Capsicum annuum HOM05D009044 ORTHO05D011261 8.9e-58 226.9 126 100.0
CAN.G577.5 Capsicum annuum HOM05D009044 ORTHO05D011261 8.9e-58 226.9 126 100.0
CAN.G78.3 Capsicum annuum HOM05D009044 ORTHO05D011261 2.2e-56 222.2 126 98.4
CAN.G131.12 Capsicum annuum HOM05D009044 ORTHO05D011261 2.4e-47 192.2 126 78.6
Sopen10g006300 Solanum pennellii HOM05D009044 ORTHO05D011261 3.9e-37 158.3 126 66.7
PGSC0003DMG402022238 Solanum tuberosum HOM05D009044 ORTHO05D011261 4.4e-33 144.8 111 66.7
Nitab4.5_0012260g0010 Nicotiana tabacum HOM05D009044 ORTHO05D011261 1.4e-31 139.8 93 78.5
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 6.2e-27 124.4 110 61.8
Cc00_g01620 Coffea canephora HOM05D009044 ORTHO05D011261 3.5e-22 108.6 112 47.3
Peaxi162Scf00622g00015 Petunia axillaris HOM05D009044 ORTHO05D011261 3.1e-18 95.5 112 50.9
Lalb_Chr00c21g0405861 Lupinus albus HOM05D009044 ORTHO05D011261 9.0e-18 94.0 133 39.8
Lalb_Chr00c24g0406991 Lupinus albus HOM05D009044 ORTHO05D011261 9.0e-18 94.0 133 39.8
EL10Ac5g11444 Beta vulgaris HOM05D009044 ORTHO05D011261 1.2e-17 93.6 124 46.0
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 1.5e-17 93.2 112 45.5
Nitab4.5_0004471g0160 Nicotiana tabacum HOM05D009044 ORTHO05D011261 2.6e-17 92.4 79 62.0
arahy.Tifrunner.gnm1.ann1.AMEH8M Arachis hypogaea HOM05D009044 ORTHO05D011261 1.3e-16 90.1 117 42.7
arahy.Tifrunner.gnm1.ann1.K6P20N Arachis hypogaea HOM05D009044 ORTHO05D011261 1.3e-16 90.1 117 42.7
arahy.Tifrunner.gnm1.ann1.TYE1TB Arachis hypogaea HOM05D009044 ORTHO05D011261 1.3e-16 90.1 117 42.7
TPR.G10887 Trifolium pratense HOM05D009044 ORTHO05D011261 1.7e-16 89.7 121 42.1
arahy.Tifrunner.gnm1.ann1.4L1UA2 Arachis hypogaea HOM05D009044 ORTHO05D011261 4.9e-16 88.2 113 42.5
arahy.Tifrunner.gnm1.ann1.QUEV48 Arachis hypogaea HOM05D009044 ORTHO05D011261 4.9e-16 88.2 113 42.5
arahy.Tifrunner.gnm1.ann1.ES8831 Arachis hypogaea HOM05D009044 ORTHO05D011261 1.6e-14 83.2 117 43.6
arahy.Tifrunner.gnm1.ann1.P3P6H5 Arachis hypogaea HOM05D009044 ORTHO05D002807 1.6e-14 83.2 117 43.6
CAN.G950.5 Capsicum annuum HOM05D009044 ORTHO05D011261 3.5e-14 82.0 113 42.5
Psat6g067520 Pisum sativum HOM05D009044 ORTHO05D011261 1.3e-13 80.1 105 43.8
CAN.G584.15 Capsicum annuum HOM05D009044 ORTHO05D011261 3.0e-13 79.0 112 38.4
CAN.G1321.8 Capsicum annuum HOM05D009044 ORTHO05D011261 5.1e-13 78.2 112 38.4
Solyc00g500345.1 Solanum lycopersicum HOM05D000743 ORTHO05D000580 6.6e-13 77.8 99 42.4
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 4.3e-12 75.1 73 42.5
arahy.Tifrunner.gnm1.ann1.2Y9TRI Arachis hypogaea HOM05D009044 ORTHO05D011261 5.6e-12 74.7 94 45.7
CAN.G1082.4 Capsicum annuum HOM05D009044 ORTHO05D011261 7.4e-12 74.3 112 36.6
Psat4g178280 Pisum sativum HOM05D009044 ORTHO05D011261 1.3e-11 73.6 77 48.1
Migut.E01132 Erythranthe guttata HOM05D009044 ORTHO05D011261 3.6e-11 72.0 68 48.5
AUR62042353 Chenopodium quinoa HOM05D004537 ORTHO05D005492 7.6e-09 64.3 84 45.2
Lsat_1_v5_gn_5_126261 Lactuca sativa HOM05D009044 ORTHO05D011261 9.9e-09 63.9 126 41.3
Lsat_1_v5_gn_6_67941 Lactuca sativa HOM05D009044 ORTHO05D011261 9.9e-09 63.9 126 41.3
Lsat_1_v5_gn_9_49181 Lactuca sativa HOM05D009044 ORTHO05D011261 9.9e-09 63.9 126 41.3
Psat0s922g0200 Pisum sativum HOM05D014813 ORTHO05D011261 2.4e-07 59.3 52 44.2
AUR62026821 Chenopodium quinoa HOM05D004537 ORTHO05D005492 7.1e-07 57.8 75 42.7
Lsat_1_v5_gn_3_62201 Lactuca sativa HOM05D009044 ORTHO05D011261 1.2e-06 57.0 77 36.4


User provided reference genes

Program Settings