Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G575.69 Capsicum annuum HOM05D000053 ORTHO05D000058 1.8e-39 167.9 83 100.0
CAN.G575.84 Capsicum annuum HOM05D000132 ORTHO05D000058 2.7e-27 127.5 118 61.9
CAN.G575.104 Capsicum annuum HOM05D000033 ORTHO05D007915 3.8e-26 123.6 116 62.1
CAN.G575.72 Capsicum annuum HOM05D000053 ORTHO05D000058 1.9e-25 121.3 117 60.7
CAN.G575.74 Capsicum annuum HOM05D000053 ORTHO05D000035 1.6e-24 118.2 121 59.5
CAN.G1833.5 Capsicum annuum HOM05D000132 ORTHO05D000058 2.8e-24 117.5 91 70.3
CAN.G575.67 Capsicum annuum HOM05D000053 ORTHO05D000058 3.6e-24 117.1 120 59.2
CAN.G793.60 Capsicum annuum HOM05D000053 ORTHO05D000035 3.6e-24 117.1 117 58.1
PGSC0003DMG401025507 Solanum tuberosum HOM05D000053 ORTHO05D000058 1.0e-23 115.5 87 73.6
CAN.G1579.19 Capsicum annuum HOM05D000132 ORTHO05D000058 1.4e-23 115.2 81 75.3
CAN.G575.125 Capsicum annuum HOM05D000053 ORTHO05D000035 1.4e-23 115.2 74 79.7
CAN.G1833.6 Capsicum annuum HOM05D002496 ORTHO05D002787 3.0e-23 114.0 108 59.3
CAN.G866.28 Capsicum annuum HOM05D000132 ORTHO05D000058 5.2e-23 113.2 109 58.7
CAN.G2075.2 Capsicum annuum HOM05D000053 ORTHO05D000035 1.2e-22 112.1 118 58.5
CAN.G575.71 Capsicum annuum HOM05D000132 ORTHO05D000058 4.4e-22 110.2 117 54.7
CAN.G575.115 Capsicum annuum HOM05D000053 ORTHO05D000035 1.1e-20 105.5 120 55.8
Solyc06g008270.2 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.4e-20 105.1 120 54.2
Solyc06g008300.4 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.1e-20 103.6 120 52.5
Nitab4.5_0012123g0010 Nicotiana tabacum HOM05D000132 ORTHO05D000058 5.4e-20 103.2 99 62.6
CAN.G575.86 Capsicum annuum HOM05D000132 ORTHO05D000058 9.2e-20 102.4 103 55.3
PGSC0003DMG400014719 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.2e-19 102.1 120 51.7
Sopen12g034500 Solanum pennellii HOM05D000053 ORTHO05D000035 1.6e-19 101.7 120 53.3
CAN.G575.121 Capsicum annuum HOM05D000002 ORTHO05D000001 2.0e-19 101.3 115 53.9
Sopen06g003130 Solanum pennellii HOM05D000053 ORTHO05D000035 2.7e-19 100.9 120 52.5
CAN.G1768.1 Capsicum annuum HOM05D000053 ORTHO05D000058 6.0e-19 99.8 113 53.1
CAN.G767.21 Capsicum annuum HOM05D000053 ORTHO05D000058 6.0e-19 99.8 112 55.4
Solyc12g099870.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 7.8e-19 99.4 120 52.5
PGSC0003DMG400023864 Solanum tuberosum HOM05D000053 ORTHO05D000035 7.8e-19 99.4 128 47.7
Sopen06g003150 Solanum pennellii HOM05D000053 ORTHO05D000035 2.3e-18 97.8 120 50.0
CAN.G1484.12 Capsicum annuum HOM05D002496 ORTHO05D002787 3.9e-18 97.1 107 52.3
CAN.G2075.7 Capsicum annuum HOM05D000132 ORTHO05D000058 1.1e-17 95.5 87 64.4
Peaxi162Scf00062g00928 Petunia axillaris HOM05D000053 ORTHO05D000035 1.5e-17 95.1 120 50.8
CAN.G575.124 Capsicum annuum HOM05D000053 ORTHO05D000058 1.9e-17 94.7 121 51.2
Nitab4.5_0006164g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000058 7.3e-17 92.8 120 52.5
PGSC0003DMG400024447 Solanum tuberosum HOM05D000132 ORTHO05D000058 9.5e-17 92.4 120 49.2
CAN.G1579.25 Capsicum annuum HOM05D000053 ORTHO05D000035 2.1e-16 91.3 99 52.5
Nitab4.5_0002757g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000035 3.6e-16 90.5 119 47.9
CAN.G1836.1 Capsicum annuum HOM05D000132 ORTHO05D000058 4.7e-16 90.1 120 49.2
CAN.G101.32 Capsicum annuum HOM05D000132 ORTHO05D000058 6.2e-16 89.7 120 48.3
CAN.G193.27 Capsicum annuum HOM05D000132 ORTHO05D000058 6.2e-16 89.7 120 48.3
CAN.G2870.1 Capsicum annuum HOM05D000132 ORTHO05D000058 6.2e-16 89.7 120 48.3
Nitab4.5_0000232g0270 Nicotiana tabacum HOM05D000132 ORTHO05D000058 6.2e-16 89.7 130 46.9
PGSC0003DMG400014717 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.4e-15 88.6 100 52.0
Nitab4.5_0000232g0350 Nicotiana tabacum HOM05D000132 ORTHO05D000058 3.1e-15 87.4 130 46.9
Nitab4.5_0002757g0110 Nicotiana tabacum HOM05D000132 ORTHO05D000058 4.0e-15 87.0 121 51.2
PGSC0003DMG400027966 Solanum tuberosum HOM05D000053 ORTHO05D000058 5.2e-15 86.7 84 59.5
PGSC0003DMG401023866 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.2e-15 86.7 99 48.5
Nitab4.5_0005157g0010 Nicotiana tabacum HOM05D000132 ORTHO05D000058 8.9e-15 85.9 134 44.0
Peaxi162Scf00041g01422 Petunia axillaris HOM05D000132 ORTHO05D000058 8.9e-15 85.9 115 47.8
CAN.G21.6 Capsicum annuum HOM05D000132 ORTHO05D000058 1.2e-14 85.5 104 51.0
Sopen12g034600 Solanum pennellii HOM05D000053 ORTHO05D000035 2.6e-14 84.3 111 48.6
Solyc04g074050.4 Solanum lycopersicum HOM05D000132 ORTHO05D000058 3.4e-14 84.0 115 49.6
Sopen04g029240 Solanum pennellii HOM05D000132 ORTHO05D000058 4.4e-14 83.6 131 45.0
Solyc12g049200.1 Solanum lycopersicum HOM05D000053 ORTHO05D000058 7.5e-14 82.8 92 55.4
PGSC0003DMG400004722 Solanum tuberosum HOM05D000053 ORTHO05D000035 7.5e-14 82.8 104 49.0
PGSC0003DMG400017713 Solanum tuberosum HOM05D000132 ORTHO05D000058 9.8e-14 82.4 131 43.5
CAN.G101.34 Capsicum annuum HOM05D000132 ORTHO05D000058 1.3e-13 82.0 135 43.0
Solyc12g049190.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.3e-13 82.0 114 46.5
Sopen12g023650 Solanum pennellii HOM05D000053 ORTHO05D000035 1.3e-13 82.0 116 46.6
CAN.G517.2 Capsicum annuum HOM05D000132 ORTHO05D000058 1.7e-13 81.6 117 45.3
Solyc12g099980.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.9e-13 80.1 98 48.0
CAN.G792.60 Capsicum annuum HOM05D000053 ORTHO05D000058 8.3e-13 79.3 66 66.7
Peaxi162Scf00168g01723 Petunia axillaris HOM05D000132 ORTHO05D000058 8.3e-13 79.3 130 42.3
Solyc04g074030.3 Solanum lycopersicum HOM05D000132 ORTHO05D000058 8.3e-13 79.3 130 43.1
PGSC0003DMG401023870 Solanum tuberosum HOM05D000132 ORTHO05D000058 8.3e-13 79.3 100 45.0
CAN.G1579.22 Capsicum annuum HOM05D000053 ORTHO05D000035 1.4e-12 78.6 86 59.3
Nitab4.5_0001816g0110 Nicotiana tabacum HOM05D000132 ORTHO05D000058 1.9e-12 78.2 134 42.5
CAN.G2844.1 Capsicum annuum HOM05D000132 ORTHO05D000058 2.4e-12 77.8 93 49.5
Solyc04g074000.3 Solanum lycopersicum HOM05D000132 ORTHO05D000058 2.4e-12 77.8 130 42.3
CAN.G518.12 Capsicum annuum HOM05D000053 ORTHO05D000058 5.4e-12 76.6 60 71.7
PGSC0003DMG400027967 Solanum tuberosum HOM05D000132 ORTHO05D000058 5.4e-12 76.6 126 43.7
PGSC0003DMG400027971 Solanum tuberosum HOM05D000132 ORTHO05D000058 5.4e-12 76.6 126 43.7
Solyc04g074020.2 Solanum lycopersicum HOM05D000132 ORTHO05D000058 1.2e-11 75.5 130 41.5
PGSC0003DMG400011989 Solanum tuberosum HOM05D000132 ORTHO05D000058 2.1e-11 74.7 132 43.2
CAN.G101.9 Capsicum annuum HOM05D005506 ORTHO05D004172 2.7e-11 74.3 96 52.1
CAN.G1816.11 Capsicum annuum HOM05D000132 ORTHO05D000058 3.5e-11 73.9 57 70.2
Nitab4.5_0001307g0030 Nicotiana tabacum HOM05D000132 ORTHO05D000058 3.5e-11 73.9 124 42.7
PGSC0003DMG401006401 Solanum tuberosum HOM05D000132 ORTHO05D000058 6.0e-11 73.2 126 41.3
Nitab4.5_0000014g0450 Nicotiana tabacum HOM05D000132 ORTHO05D000058 3.0e-10 70.9 115 42.6
Sopen01g022930 Solanum pennellii HOM05D000053 ORTHO05D000058 8.6e-10 69.3 43 76.7
CAN.G193.25 Capsicum annuum HOM05D017865 ORTHO05D000058 2.5e-09 67.8 67 58.2
Peaxi162Scf00041g01424 Petunia axillaris HOM05D000132 ORTHO05D000058 4.3e-09 67.0 137 39.4
CAN.G2075.3 Capsicum annuum HOM05D000053 ORTHO05D000035 7.3e-09 66.2 38 92.1
PGSC0003DMG400037551 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.2e-08 63.2 123 37.4
CAN.G941.13 Capsicum annuum HOM05D000053 ORTHO05D000035 1.4e-07 62.0 88 42.0
PGSC0003DMG401031447 Solanum tuberosum HOM05D000053 ORTHO05D000058 2.3e-07 61.2 31 87.1
Cc00_g20650 Coffea canephora HOM05D000132 ORTHO05D000058 2.6e-06 57.8 112 38.4
Carub.0001s3342 Capsella rubella HOM05D000132 ORTHO05D000058 4.4e-06 57.0 90 40.0
Cc00_g05240 Coffea canephora HOM05D000132 ORTHO05D000058 9.9e-06 55.8 77 42.9


User provided reference genes

Program Settings