Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G57.24 Capsicum annuum HOM05D001547 ORTHO05D001426 2.4e-40 168.3 81 100.0
Solyc10g046810.1 Solanum lycopersicum HOM05D001547 ORTHO05D001426 2.4e-16 88.6 68 61.8
Nitab4.5_0002256g0060 Nicotiana tabacum HOM05D001547 ORTHO05D001426 1.9e-13 79.0 68 63.2
Peaxi162Scf00003g03828 Petunia axillaris HOM05D001547 ORTHO05D001426 1.6e-12 75.9 68 55.9
Solyc10g046830.2 Solanum lycopersicum HOM05D001547 ORTHO05D001426 2.8e-12 75.1 68 57.4
PGSC0003DMG400012742 Solanum tuberosum HOM05D001547 ORTHO05D001426 5.2e-11 70.9 68 54.4
PGSC0003DMG400002420 Solanum tuberosum HOM05D001547 ORTHO05D001426 7.5e-10 67.0 68 51.5
Solyc07g018240.1 Solanum lycopersicum HOM05D001547 ORTHO05D001426 1.7e-09 65.9 68 50.0
Sopen07g007390 Solanum pennellii HOM05D001547 ORTHO05D001426 1.7e-09 65.9 68 50.0
CSS0049626 Camellia sinensis var. sinensis HOM05D001547 ORTHO05D001426 2.2e-09 65.5 68 51.5
Actinidia39045 Actinidia chinensis HOM05D001547 ORTHO05D001426 3.7e-09 64.7 68 48.5
Solyc07g018250.1 Solanum lycopersicum HOM05D001547 ORTHO05D001426 4.9e-09 64.3 68 50.0
Hma1.2p1_0557F.1_g178400 Hydrangea macrophylla HOM05D001547 ORTHO05D001426 8.3e-09 63.5 46 58.7
Nitab4.5_0003569g0010 Nicotiana tabacum HOM05D001547 ORTHO05D001426 1.4e-08 62.8 68 51.5
Nitab4.5_0000056g0170 Nicotiana tabacum HOM05D001547 ORTHO05D001426 1.9e-08 62.4 68 48.5
CAN.G1577.21 Capsicum annuum HOM05D001547 ORTHO05D001426 2.4e-08 62.0 70 51.4
Nn5g28160 Nelumbo nucifera HOM05D001547 ORTHO05D001426 2.4e-08 62.0 46 56.5
Oeu025685.1 Olea europaea HOM05D001547 ORTHO05D001426 2.4e-08 62.0 71 49.3
Nitab4.5_0002245g0070 Nicotiana tabacum HOM05D001547 ORTHO05D001426 5.4e-08 60.8 71 46.5
PGSC0003DMG400023810 Solanum tuberosum HOM05D001547 ORTHO05D001426 7.1e-08 60.5 70 47.1
Hma1.2p1_0249F.1_g102320 Hydrangea macrophylla HOM05D000092 ORTHO05D000042 1.2e-07 59.7 68 47.1
Cfa021305 Carpinus fangiana HOM05D001547 ORTHO05D001426 1.6e-07 59.3 46 56.5
FvH4_5g29630 Fragaria vesca HOM05D001547 ORTHO05D001426 2.1e-07 58.9 50 56.0
FAN18G1132 Fragaria x ananassa HOM05D001547 ORTHO05D001426 2.1e-07 58.9 50 56.0
Sopen01g046650 Solanum pennellii HOM05D001547 ORTHO05D001426 2.1e-07 58.9 68 47.1
Lj5P251T64 Lonicera japonica HOM05D001547 ORTHO05D001426 2.7e-07 58.5 68 45.6
AT3G06470 Arabidopsis thaliana HOM05D001547 ORTHO05D001426 3.5e-07 58.2 46 56.5
Cpa.g.sc113.68 Carica papaya HOM05D001547 ORTHO05D001426 3.5e-07 58.2 46 56.5
Nn1g08694 Nelumbo nucifera HOM05D001547 ORTHO05D001426 3.5e-07 58.2 38 60.5
Nitab4.5_0001706g0030 Nicotiana tabacum HOM05D001547 ORTHO05D001426 3.5e-07 58.2 35 71.4
PGSC0003DMG400023788 Solanum tuberosum HOM05D001547 ORTHO05D001426 3.5e-07 58.2 68 45.6
vmacro01765 Vaccinium macrocarpon HOM05D000102 ORTHO05D003793 3.5e-07 58.2 68 44.1
AL3G17490 Arabidopsis lyrata HOM05D001547 ORTHO05D001426 4.6e-07 57.8 46 54.3
BcaB04g21340 Brassica carinata HOM05D001547 ORTHO05D001426 4.6e-07 57.8 46 54.3
Carub.0003s0592 Capsella rubella HOM05D001547 ORTHO05D001426 4.6e-07 57.8 46 54.3
Aqoxy6G00162 Aquilegia oxysepala HOM05D001547 ORTHO05D001426 6.0e-07 57.4 46 52.2
BcaC09g47898 Brassica carinata HOM05D001547 ORTHO05D001426 6.0e-07 57.4 46 54.3
BolC1t05619H Brassica oleracea HOM05D001547 ORTHO05D001426 6.0e-07 57.4 46 54.3
CiPaw.05G043600 Carya illinoinensis HOM05D001547 ORTHO05D001426 6.0e-07 57.4 50 54.0
Haze_01658 Corylus avellana HOM05D001547 ORTHO05D001426 6.0e-07 57.4 46 54.3
FAN13G2562 Fragaria x ananassa HOM05D001547 ORTHO05D001426 6.0e-07 57.4 50 56.0
Lsat_1_v5_gn_5_109420 Lactuca sativa HOM05D001547 ORTHO05D001426 6.0e-07 57.4 68 47.1
Lalb_Chr18g0060891 Lupinus albus HOM05D001547 ORTHO05D001426 6.0e-07 57.4 73 49.3
PSO170G2757 Papaver somniferum HOM05D001547 ORTHO05D001426 6.0e-07 57.4 46 54.3
Solyc01g104180.2 Solanum lycopersicum HOM05D001547 ORTHO05D001426 6.0e-07 57.4 70 47.1
Sopen01g046720 Solanum pennellii HOM05D001547 ORTHO05D001426 6.0e-07 57.4 68 44.1
THA.LOC104802715 Tarenaya hassleriana HOM05D001547 ORTHO05D001426 6.0e-07 57.4 46 56.5
CANSAT11G1701 Cannabis sativa HOM05D001547 ORTHO05D001426 7.8e-07 57.0 46 54.3
Thhalv10021309m.g Eutrema salsugineum HOM05D001547 ORTHO05D001426 7.8e-07 57.0 46 54.3
FAN08G2307 Fragaria x ananassa HOM05D001547 ORTHO05D001426 7.8e-07 57.0 50 54.0
Actinidia00209 Actinidia chinensis HOM05D004517 ORTHO05D005366 1.0e-06 56.6 68 45.6
BcaC05g29820 Brassica carinata HOM05D001547 ORTHO05D001426 1.0e-06 56.6 46 54.3
C05p60750 Brassica napus HOM05D001547 ORTHO05D001426 1.0e-06 56.6 46 54.3
BolC5t34735H Brassica oleracea HOM05D001547 ORTHO05D001426 1.0e-06 56.6 46 54.3
CAN.G1577.10 Capsicum annuum HOM05D001547 ORTHO05D001426 1.0e-06 56.6 68 44.1
CARHR081000 Cardamine hirsuta HOM05D001547 ORTHO05D001426 1.0e-06 56.6 46 54.3
Thhalv10021249m.g Eutrema salsugineum HOM05D001547 ORTHO05D001426 1.0e-06 56.6 46 52.2
HanXRQChr10g0290401 Helianthus annuus HOM05D001547 ORTHO05D001426 1.0e-06 56.6 68 42.6
MBI03_g33019_MAGBIO Magnolia biondii HOM05D001547 ORTHO05D001426 1.0e-06 56.6 46 52.2
MD15G1421900 Malus domestica HOM05D001547 ORTHO05D001426 1.0e-06 56.6 62 48.4
Solyc01g104280.2 Solanum lycopersicum HOM05D001547 ORTHO05D001426 1.0e-06 56.6 68 44.1
TWI14G1183 Tripterygium wilfordii HOM05D001547 ORTHO05D001426 1.0e-06 56.6 68 44.1
A05p41550 Brassica napus HOM05D001547 ORTHO05D001426 1.3e-06 56.2 46 52.2
BraA05t22876Z Brassica rapa HOM05D001547 ORTHO05D001426 1.3e-06 56.2 46 52.2
Lj9P306T56 Lonicera japonica HOM05D001547 ORTHO05D001426 1.3e-06 56.2 68 42.6
RcHm_v2.0_Chr7g0222681 Rosa chinensis HOM05D001547 ORTHO05D001426 1.3e-06 56.2 50 54.0
Sp3g05400 Schrenkiella parvula HOM05D001547 ORTHO05D001426 1.3e-06 56.2 46 52.2
DCAR_013990 Daucus carota HOM05D001547 ORTHO05D001426 1.7e-06 55.8 46 54.3
Prupe.1G567100 Prunus persica HOM05D001547 ORTHO05D001426 1.7e-06 55.8 62 48.4
Sed0026506 Sechium edule HOM05D001547 ORTHO05D001426 1.7e-06 55.8 50 54.0
BcaC05g30022 Brassica carinata HOM05D001547 ORTHO05D001426 2.3e-06 55.5 46 50.0
BcaC09g47901 Brassica carinata HOM05D001547 ORTHO05D001426 2.3e-06 55.5 50 50.0
BolC1t05615H Brassica oleracea HOM05D001547 ORTHO05D001426 2.3e-06 55.5 50 50.0
Ciclev10004064m.g Citrus clementina HOM05D001547 ORTHO05D001426 2.3e-06 55.5 68 45.6
Eucgr.I02717 Eucalyptus grandis HOM05D001547 ORTHO05D001426 2.3e-06 55.5 68 39.7
MSTRG.16526 Avicennia marina HOM05D001547 ORTHO05D001426 3.0e-06 55.1 65 44.6
ClCG09G014360 Citrullus lanatus HOM05D001547 ORTHO05D001426 3.0e-06 55.1 50 52.0
MELO3C014378.2 Cucumis melo HOM05D001547 ORTHO05D001426 3.0e-06 55.1 50 52.0
CsaV3_6G037390 Cucumis sativus L. HOM05D001547 ORTHO05D001426 3.0e-06 55.1 50 52.0
Aa31LG5G17000 Aethionema arabicum HOM05D001547 ORTHO05D001426 3.9e-06 54.7 46 52.2
AT3G06460 Arabidopsis thaliana HOM05D001547 ORTHO05D001426 3.9e-06 54.7 46 50.0
Ciclev10003400m.g Citrus clementina HOM05D001547 ORTHO05D001426 3.9e-06 54.7 68 45.6
Thecc.02G039400 Theobroma cacao HOM05D001547 ORTHO05D001426 3.9e-06 54.7 68 44.1
BcaC09g47900 Brassica carinata HOM05D001547 ORTHO05D001426 5.1e-06 54.3 60 45.0
BNapus_Darmor_BZH_scaffold_118p00090 Brassica napus HOM05D001547 ORTHO05D001426 5.1e-06 54.3 72 41.7
BNapus_Darmor_BZH_scaffold_118p00100 Brassica napus HOM05D001547 ORTHO05D001426 5.1e-06 54.3 60 45.0
BolC1t05618H Brassica oleracea HOM05D001547 ORTHO05D001426 5.1e-06 54.3 60 45.0
BraA01t04435Z Brassica rapa HOM05D001547 ORTHO05D001426 5.1e-06 54.3 72 41.7
BraA01t04436Z Brassica rapa HOM05D001547 ORTHO05D001426 5.1e-06 54.3 60 45.0
Sp3g05410 Schrenkiella parvula HOM05D001547 ORTHO05D001426 6.6e-06 53.9 46 50.0


User provided reference genes

Program Settings