Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G569.18 Capsicum annuum HOM05D005165 ORTHO05D006361 2.2e-76 288.9 146 100.0
Sopen02g025090 Solanum pennellii HOM05D005165 ORTHO05D006361 1.5e-61 239.6 127 96.9
Solyc02g080400.3 Solanum lycopersicum HOM05D005165 ORTHO05D006361 5.8e-61 237.7 127 96.1
PGSC0003DMG400016486 Solanum tuberosum HOM05D005165 ORTHO05D006361 2.9e-60 235.3 127 96.9
Peaxi162Scf00262g00611 Petunia axillaris HOM05D005165 ORTHO05D006361 7.4e-56 220.7 127 88.2
Nitab4.5_0007482g0050 Nicotiana tabacum HOM05D005165 ORTHO05D006361 1.3e-55 219.9 135 83.7
Nitab4.5_0003254g0110 Nicotiana tabacum HOM05D005165 ORTHO05D006361 6.9e-54 214.2 126 85.7
Prupe.4G023200 Prunus persica HOM05D005165 ORTHO05D006361 4.3e-48 194.9 128 77.3
Oeu063907.1 Olea europaea HOM05D005165 ORTHO05D006361 9.6e-48 193.7 128 76.6
GSVIVG01002955001 Vitis vinifera HOM05D005165 ORTHO05D006361 4.8e-47 191.4 127 76.4
Dinv13878 Davidia involucrata HOM05D005165 ORTHO05D006361 8.2e-47 190.7 129 77.5
GSVIVG01004517001 Vitis vinifera HOM05D005165 ORTHO05D006361 1.8e-46 189.5 127 75.6
Cc09_g01850 Coffea canephora HOM05D005165 ORTHO05D006361 2.4e-46 189.1 127 74.8
MSTRG.15979 Avicennia marina HOM05D005165 ORTHO05D006361 3.1e-46 188.7 129 72.1
Manes.17G037700 Manihot esculenta HOM05D005165 ORTHO05D006361 1.2e-45 186.8 130 72.3
Rhsim13G0155600 Rhododendron simsii HOM05D005165 ORTHO05D006361 1.2e-45 186.8 129 75.2
Thecc.06G218200 Theobroma cacao HOM05D005165 ORTHO05D006361 1.5e-45 186.4 127 74.8
Actinidia05522 Actinidia chinensis HOM05D005165 ORTHO05D006361 2.0e-45 186.0 129 73.6
QL05p073557 Quercus lobata HOM05D005165 ORTHO05D006361 3.4e-45 185.3 129 72.9
QL05p073800 Quercus lobata HOM05D005165 ORTHO05D006361 3.4e-45 185.3 129 72.9
arahy.Tifrunner.gnm1.ann1.K6JFDD Arachis hypogaea HOM05D005165 ORTHO05D006361 5.8e-45 184.5 127 73.2
CSS0001066 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 5.8e-45 184.5 129 74.4
Lj4g0017916 Lotus japonicus HOM05D005165 ORTHO05D006361 7.6e-45 184.1 129 70.5
arahy.Tifrunner.gnm1.ann1.FU33AK Arachis hypogaea HOM05D005165 ORTHO05D006361 1.0e-44 183.7 127 73.2
arahy.Tifrunner.gnm1.ann1.QZ1TNI Arachis hypogaea HOM05D005165 ORTHO05D006361 1.0e-44 183.7 127 73.2
Medtr4g131940 Medicago truncatula HOM05D005165 ORTHO05D006361 2.2e-44 182.6 127 71.7
Ca_21091_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 2.9e-44 182.2 127 71.7
Ca_30199_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 2.9e-44 182.2 127 71.7
CANSAT56G1527 Cannabis sativa HOM05D005165 ORTHO05D006361 3.8e-44 181.8 126 69.8
MD10G1319300 Malus domestica HOM05D005165 ORTHO05D006361 4.9e-44 181.4 129 72.1
SGA_v2.0_scaffold4G01924 Striga asiatica HOM05D005165 ORTHO05D006361 4.9e-44 181.4 126 72.2
Haze_06780 Corylus avellana HOM05D005165 ORTHO05D006361 6.5e-44 181.0 127 70.9
Duzib235G1549 Durio zibethinus HOM05D005165 ORTHO05D006361 8.4e-44 180.6 127 72.4
Cfa000241 Carpinus fangiana HOM05D005165 ORTHO05D006361 2.5e-43 179.1 127 70.9
FAN21G3214 Fragaria x ananassa HOM05D005165 ORTHO05D006361 2.5e-43 179.1 129 72.9
CSS0020297 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 3.2e-43 178.7 126 73.8
RcHm_v2.0_Chr5g0003561 Rosa chinensis HOM05D005165 ORTHO05D006361 3.2e-43 178.7 131 71.0
vmacro03694 Vaccinium macrocarpon HOM05D005165 ORTHO05D006361 3.2e-43 178.7 129 71.3
CSS0012929 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 7.1e-43 177.6 130 70.8
Eucgr.D01308 Eucalyptus grandis HOM05D005165 ORTHO05D006361 1.2e-42 176.8 127 70.9
FvH4_3g02340 Fragaria vesca HOM05D005165 ORTHO05D006361 1.6e-42 176.4 129 72.1
FAN21G2432 Fragaria x ananassa HOM05D005165 ORTHO05D006361 1.6e-42 176.4 129 72.1
FAN25G1001 Fragaria x ananassa HOM05D005165 ORTHO05D006361 1.6e-42 176.4 129 72.1
Atru.chr10.2199 Acer truncatum HOM05D005165 ORTHO05D006361 2.1e-42 176.0 127 70.1
Lalb_Chr01g0014921 Lupinus albus HOM05D005165 ORTHO05D006361 2.1e-42 176.0 129 71.3
TPR.G37081 Trifolium pratense HOM05D005165 ORTHO05D006361 2.1e-42 176.0 139 64.7
Gorai.010G179700 Gossypium raimondii HOM05D005165 ORTHO05D006361 2.7e-42 175.6 127 70.9
Sed0027912 Sechium edule HOM05D005165 ORTHO05D006361 2.7e-42 175.6 127 69.3
Gohir.D06G153700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 3.5e-42 175.3 127 70.1
CiPaw.09G090000 Carya illinoinensis HOM05D005165 ORTHO05D006361 4.6e-42 174.9 127 69.3
MELO3C002466.2 Cucumis melo HOM05D005165 ORTHO05D006361 7.9e-42 174.1 129 69.0
Migut.M01303 Erythranthe guttata HOM05D005165 ORTHO05D006361 7.9e-42 174.1 123 70.7
Nn1g03565 Nelumbo nucifera HOM05D005165 ORTHO05D006361 7.9e-42 174.1 129 68.2
PGR004G2872 Punica granatum HOM05D005165 ORTHO05D006361 7.9e-42 174.1 129 69.0
VMungo1215G1456 Vigna mungo HOM05D005165 ORTHO05D000002 7.9e-42 174.1 127 70.1
Glyma.07G259400 Glycine max HOM05D005165 ORTHO05D006361 1.0e-41 173.7 127 68.5
TAR627G0931 Trochodendron aralioides HOM05D005165 ORTHO05D006361 1.0e-41 173.7 127 69.3
ClCG03G004830 Citrullus lanatus HOM05D005165 ORTHO05D006361 1.3e-41 173.3 127 70.9
Potri.004G017500 Populus trichocarpa HOM05D005165 ORTHO05D006361 1.8e-41 172.9 127 66.1
Glyma.17G014900 Glycine max HOM05D005165 ORTHO05D006361 2.3e-41 172.6 127 67.7
unitig_748.g7100 Utricularia gibba HOM05D005165 ORTHO05D006361 2.3e-41 172.6 127 67.7
CsaV3_1G010870 Cucumis sativus L. HOM05D005165 ORTHO05D006361 3.0e-41 172.2 129 68.2
TWI63G0677 Tripterygium wilfordii HOM05D005165 ORTHO05D006361 3.0e-41 172.2 129 69.8
Ciclev10014034m.g Citrus clementina HOM05D005165 ORTHO05D006361 3.9e-41 171.8 129 67.4
Sabra04G0009600 Salix brachista HOM05D005165 ORTHO05D006361 3.9e-41 171.8 127 66.1
Cpa.g.sc198.37 Carica papaya HOM05D005165 ORTHO05D006361 5.1e-41 171.4 126 69.8
Gorai.011G015400 Gossypium raimondii HOM05D005165 ORTHO05D006361 1.1e-40 170.2 127 70.1
A01p13150 Brassica napus HOM05D005165 ORTHO05D006361 1.5e-40 169.9 126 69.8
BraA01t01259Z Brassica rapa HOM05D005165 ORTHO05D006361 1.5e-40 169.9 126 69.8
DCAR_004209 Daucus carota HOM05D005165 ORTHO05D006361 1.5e-40 169.9 127 66.1
Thhalv10024235m.g Eutrema salsugineum HOM05D005165 ORTHO05D006361 1.5e-40 169.9 128 69.5
THA.LOC104813036 Tarenaya hassleriana HOM05D005165 ORTHO05D006361 1.5e-40 169.9 128 69.5
Gohir.A10G013700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 2.5e-40 169.1 127 69.3
Lj2C270G14 Lonicera japonica HOM05D005165 ORTHO05D006361 2.5e-40 169.1 121 71.9
Phvul.003G077600 Phaseolus vulgaris HOM05D005165 ORTHO05D006361 2.5e-40 169.1 127 68.5
BcaNung02250 Brassica carinata HOM05D005165 ORTHO05D006361 4.3e-40 168.3 126 69.0
Gohir.D10G013600 Gossypium hirsutum HOM05D005165 ORTHO05D006361 5.7e-40 167.9 127 68.5
BcaC09g51197 Brassica carinata HOM05D005165 ORTHO05D006361 1.3e-39 166.8 126 68.3
C01p15840 Brassica napus HOM05D005165 ORTHO05D006361 1.3e-39 166.8 126 68.3
BolC1t01538H Brassica oleracea HOM05D005165 ORTHO05D006361 1.3e-39 166.8 126 68.3
Aqoxy1G03259 Aquilegia oxysepala HOM05D005165 ORTHO05D006361 1.6e-39 166.4 127 66.1
Sp7g19990 Schrenkiella parvula HOM05D005165 ORTHO05D006361 2.8e-39 165.6 127 66.9
CARHR228530 Cardamine hirsuta HOM05D005165 ORTHO05D006361 4.8e-39 164.9 128 66.4
COL.COLO4_31753 Corchorus olitorius HOM05D005165 ORTHO05D006361 8.2e-39 164.1 126 68.3
PSO541G6479 Papaver somniferum HOM05D005165 ORTHO05D006361 1.1e-38 163.7 129 65.1
AT4G21820 Arabidopsis thaliana HOM05D005165 ORTHO05D006361 1.4e-38 163.3 126 67.5
Carub.0007s1958 Capsella rubella HOM05D005165 ORTHO05D006361 1.8e-38 162.9 126 66.7
Aa31LG6G3830 Aethionema arabicum HOM05D005165 ORTHO05D006361 2.4e-38 162.5 132 62.9
PSO675G7058 Papaver somniferum HOM05D005165 ORTHO05D006361 2.4e-38 162.5 129 64.3
CSS0021361 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 3.1e-38 162.2 129 67.4
MBI02_g22104_MAGBIO Magnolia biondii HOM05D005165 ORTHO05D006361 2.6e-37 159.1 127 63.0
Psat4g007280 Pisum sativum HOM05D005165 ORTHO05D006361 2.6e-37 159.1 127 63.8
SGA_v2.0_scaffold186G40236 Striga asiatica HOM05D005165 ORTHO05D006361 2.9e-36 155.6 109 72.5
Hund23483 Selenicereus undatus HOM05D005165 ORTHO05D006361 3.8e-36 155.2 127 61.4
Sc17g0007260 Simmondsia chinensis HOM05D005165 ORTHO05D006361 3.8e-36 155.2 127 60.6
HanXRQChr05g0129591 Helianthus annuus HOM05D005165 ORTHO05D006361 1.1e-35 153.7 127 59.8
Ah.09g235020 Amaranthus hybridus HOM05D005165 ORTHO05D006361 5.5e-35 151.4 127 61.4
AUR62012682 Chenopodium quinoa HOM05D005165 ORTHO05D006361 1.2e-34 150.2 127 60.6
Lsat_1_v5_gn_7_17640 Lactuca sativa HOM05D005165 ORTHO05D006361 2.7e-34 149.1 127 59.1
AUR62021974 Chenopodium quinoa HOM05D005165 ORTHO05D006361 4.6e-34 148.3 127 59.8
ECA236G1313 Erigeron canadensis HOM05D005165 ORTHO05D006361 6.1e-34 147.9 122 59.0
CDE05G2160 Ceratophyllum demersum HOM05D005165 ORTHO05D006361 2.9e-28 129.0 126 50.0
EL10Ac8g20027 Beta vulgaris HOM05D005165 ORTHO05D006361 7.9e-26 120.9 91 65.9
SEGI_17063 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 4.5e-21 105.1 127 41.7
Zm00001eb322760 Zea mays HOM05D005165 ORTHO05D006361 4.2e-19 98.6 126 43.7
HPP92_012397 Vanilla planifolia HOM05D005165 ORTHO05D006361 2.7e-18 95.9 84 58.3
SMO200G0122 Selaginella moellendorffii HOM05D005165 ORTHO05D006361 1.8e-17 93.2 129 38.0
AL7G32100 Arabidopsis lyrata HOM05D005165 ORTHO05D006361 8.8e-17 90.9 73 64.4
Pp3c24_1350 Physcomitrium patens HOM05D005165 ORTHO05D006361 9.7e-16 87.4 129 38.8
AagrBONN_evm.TU.Sc2ySwM_117.1637__1638 Anthoceros agrestis HOM05D005165 ORTHO05D006361 1.3e-15 87.0 128 36.7
Mapoly0043s0047 Marchantia polymorpha HOM05D005165 ORTHO05D006361 1.3e-15 87.0 129 34.1
ATR0752G007 Amborella trichopoda HOM05D005165 ORTHO05D006361 2.4e-14 82.8 75 57.3
HPP92_012318 Vanilla planifolia HOM05D005165 ORTHO05D006361 3.8e-12 75.5 129 37.2
CBR_g12408 Chara braunii HOM05D000019 ORTHO05D000048 6.7e-09 64.7 132 26.5


User provided reference genes

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