Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 6.5e-120 434.1 223 100.0
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 6.1e-94 347.8 235 81.3
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 1.7e-91 339.7 235 80.4
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 9.1e-90 334.0 235 79.1
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 8.0e-78 294.3 238 69.7
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 8.8e-77 290.8 242 71.1
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.8e-69 266.5 278 60.8
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 6.0e-57 224.9 237 54.9
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 7.8e-57 224.6 237 54.4
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 9.5e-55 217.6 234 57.7
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 6.8e-53 211.5 238 55.0
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 5.8e-52 208.4 240 53.8
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 5.8e-52 208.4 212 54.7
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 9.8e-52 207.6 223 53.8
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 1.3e-51 207.2 227 54.6
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 1.1e-50 204.1 203 59.1
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 4.1e-50 202.2 238 52.5
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 1.2e-49 200.7 238 52.5
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 3.9e-48 195.7 206 52.4
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 8.6e-48 194.5 222 53.2
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 1.5e-47 193.7 238 51.3
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 3.3e-47 192.6 226 52.7
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 7.3e-47 191.4 206 53.4
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 7.3e-47 191.4 195 50.8
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 7.3e-47 191.4 156 63.5
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 1.2e-46 190.7 227 49.8
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 1.6e-46 190.3 234 49.1
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 4.7e-46 188.7 195 54.9
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 8.1e-46 188.0 224 51.8
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 8.1e-46 188.0 224 49.1
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 1.4e-45 187.2 179 55.3
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 1.4e-45 187.2 206 51.5
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 3.1e-45 186.0 204 53.4
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 4.0e-45 185.7 234 50.0
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 5.2e-45 185.3 240 49.6
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 1.2e-44 184.1 211 50.7
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 1.2e-44 184.1 173 60.1
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 1.5e-44 183.7 152 59.9
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 5.8e-44 181.8 177 57.6
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 7.6e-44 181.4 179 53.1
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 9.9e-44 181.0 180 55.6
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.7e-43 180.3 183 56.8
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 2.2e-43 179.9 168 57.1
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.9e-43 179.5 198 52.0
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 6.4e-43 178.3 169 56.8
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 6.4e-43 178.3 216 49.1
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 1.4e-42 177.2 190 51.6
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 1.4e-42 177.2 166 59.0
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 1.4e-42 177.2 237 47.3
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 2.4e-42 176.4 178 55.1
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.4e-42 176.4 198 51.0
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 2.4e-42 176.4 163 55.2
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 3.2e-42 176.0 229 46.7
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 3.2e-42 176.0 180 53.9
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 3.2e-42 176.0 183 50.8
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 5.4e-42 175.3 172 55.2
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 9.2e-42 174.5 192 50.5
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 1.6e-41 173.7 176 57.4
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 2.7e-41 172.9 185 55.1
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 2.7e-41 172.9 187 56.1
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 2.7e-41 172.9 234 47.0
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 4.6e-41 172.2 174 55.2
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 4.6e-41 172.2 174 55.2
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 4.6e-41 172.2 154 59.1
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 6.0e-41 171.8 175 56.6
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 7.8e-41 171.4 176 54.5
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 7.8e-41 171.4 180 53.9
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 1.0e-40 171.0 254 44.1
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 1.3e-40 170.6 181 55.8
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 1.3e-40 170.6 175 54.9
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 1.3e-40 170.6 229 45.9
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 1.7e-40 170.2 196 53.6
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.7e-40 170.2 185 54.1
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 2.3e-40 169.9 206 48.1
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 3.0e-40 169.5 188 52.1
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 3.9e-40 169.1 183 54.1
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 3.9e-40 169.1 209 48.8
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 5.1e-40 168.7 217 49.3
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 5.1e-40 168.7 170 54.1
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 6.6e-40 168.3 191 53.4
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 8.6e-40 167.9 246 43.9
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 8.6e-40 167.9 185 53.5
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 2.5e-39 166.4 188 52.1
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 2.5e-39 166.4 170 53.5
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.5e-39 166.4 117 67.5
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 3.3e-39 166.0 184 51.6
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 3.3e-39 166.0 139 57.6
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 2.8e-38 162.9 185 50.3
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 4.7e-38 162.2 226 49.1
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 8.1e-38 161.4 206 49.0
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 8.1e-38 161.4 140 57.9
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 1.4e-37 160.6 205 50.2
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 1.8e-37 160.2 238 46.2
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 3.1e-37 159.5 164 60.4
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 5.2e-37 158.7 238 45.0
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 1.5e-36 157.1 236 44.5
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 2.0e-36 156.8 236 44.1
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 3.4e-36 156.0 134 56.7
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 5.8e-36 155.2 231 44.6
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 7.6e-36 154.8 198 47.0
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 2.2e-35 153.3 202 46.5
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.2e-35 153.3 180 51.7
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 6.4e-35 151.8 216 46.3
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 4.2e-34 149.1 206 45.1
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 1.2e-33 147.5 169 46.7
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 2.3e-32 143.3 111 64.0
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 3.3e-31 139.4 122 54.1
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 9.6e-31 137.9 119 56.3
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 1.6e-30 137.1 108 63.9
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 3.6e-30 136.0 144 52.8
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 6.2e-30 135.2 191 44.5
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 1.5e-28 130.6 113 54.9
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 5.8e-28 128.6 133 49.6
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.3e-27 127.5 234 38.9
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 6.4e-27 125.2 100 58.0
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 1.8e-24 117.1 84 64.3
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 6.7e-24 115.2 139 41.7
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 3.1e-21 106.3 84 59.5
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 1.3e-19 100.9 138 47.1
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 2.9e-19 99.8 239 36.4
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 4.5e-12 75.9 209 32.5
Nitab4.5_0002582g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.1e-10 71.2 44 75.0
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 1.3e-06 57.8 45 64.4
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 2.8e-06 56.6 90 41.1


User provided reference genes

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