Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 6.6e-163 577.4 309 100.0
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 3.5e-140 501.9 311 88.4
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 7.8e-140 500.7 311 88.1
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 4.4e-127 458.4 323 82.7
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 2.4e-125 452.6 258 95.3
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 2.0e-119 433.0 327 78.9
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 7.1e-101 371.3 292 74.3
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 1.4e-96 357.1 315 64.4
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 5.0e-94 348.6 285 67.0
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 6.5e-94 348.2 285 66.7
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 6.5e-94 348.2 285 66.7
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 9.3e-93 344.4 286 63.3
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 2.1e-92 343.2 285 66.0
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 4.3e-90 335.5 316 60.8
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 5.7e-90 335.1 246 72.0
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 7.4e-90 334.7 291 64.6
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 2.2e-89 333.2 324 59.9
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 2.2e-89 333.2 277 63.9
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 1.1e-88 330.9 313 61.0
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 1.8e-88 330.1 321 57.6
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 2.4e-88 329.7 320 60.3
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 2.6e-87 326.2 269 64.3
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 3.4e-87 325.9 325 57.2
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 3.4e-87 325.9 320 58.8
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 7.7e-87 324.7 313 60.4
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 7.7e-87 324.7 248 68.5
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 3.8e-86 322.4 258 67.1
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 1.4e-85 320.5 290 62.1
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 2.5e-85 319.7 254 66.9
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 4.2e-85 318.9 307 59.9
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 7.2e-85 318.2 360 54.4
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 1.6e-84 317.0 322 56.5
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 1.6e-84 317.0 286 62.2
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 3.0e-83 312.8 278 62.9
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 3.9e-83 312.4 258 65.9
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 5.1e-83 312.0 255 67.8
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 2.0e-82 310.1 271 65.3
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 3.3e-82 309.3 250 66.0
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 9.7e-82 307.8 296 58.1
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 9.7e-82 307.8 307 59.3
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 1.7e-81 307.0 266 63.5
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 1.8e-80 303.5 286 60.1
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 2.4e-80 303.1 315 57.5
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 4.1e-80 302.4 319 55.8
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 9.1e-80 301.2 305 56.4
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 1.2e-79 300.8 255 63.1
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 4.5e-79 298.9 295 58.0
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 5.9e-79 298.5 293 59.0
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 1.3e-78 297.4 272 57.4
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.3e-78 297.4 307 57.3
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 1.7e-78 297.0 281 61.6
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 3.8e-78 295.8 312 55.1
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 6.5e-78 295.0 269 58.7
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 6.5e-78 295.0 280 58.6
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.9e-77 293.5 248 62.9
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 3.2e-77 292.7 304 57.2
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 4.7e-76 288.9 318 53.5
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 6.1e-76 288.5 299 58.9
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 7.9e-76 288.1 308 55.8
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.8e-75 287.0 275 59.6
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 2.3e-75 286.6 275 59.3
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 3.9e-75 285.8 273 59.0
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 6.7e-75 285.0 259 58.3
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 6.7e-75 285.0 259 58.3
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 6.7e-75 285.0 259 58.3
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 6.7e-75 285.0 259 61.0
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 8.8e-75 284.6 259 58.3
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 1.5e-74 283.9 259 58.3
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 1.5e-74 283.9 259 59.1
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 5.7e-74 282.0 288 58.3
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 5.7e-74 282.0 307 53.1
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 9.7e-74 281.2 259 58.7
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 2.2e-73 280.0 259 59.1
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 2.2e-73 280.0 265 58.1
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 6.3e-73 278.5 259 58.3
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 6.3e-73 278.5 267 58.4
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 2.4e-72 276.6 259 57.5
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 2.4e-72 276.6 280 56.4
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 5.3e-72 275.4 257 58.4
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 1.1e-69 267.7 250 59.2
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 1.5e-69 267.3 267 56.6
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 4.2e-69 265.8 259 56.0
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 5.5e-69 265.4 260 56.9
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 7.2e-69 265.0 250 58.0
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 2.3e-67 260.0 281 52.3
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 3.7e-65 252.7 282 52.8
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 1.8e-64 250.4 281 54.8
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 7.0e-64 248.4 273 50.2
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 9.1e-64 248.1 268 52.6
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 1.2e-63 247.7 281 54.4
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 2.7e-63 246.5 242 56.6
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 5.0e-62 242.3 263 56.7
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 2.5e-61 240.0 300 49.3
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 4.8e-57 225.7 247 54.3
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.9e-53 213.8 262 48.1
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 4.2e-53 212.6 293 44.0
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 6.1e-52 208.8 253 50.2
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 1.0e-51 208.0 233 53.6
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 4.4e-50 202.6 203 58.6
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 3.5e-47 193.0 260 48.1
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 2.9e-46 189.9 180 55.6
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 1.1e-40 171.4 146 65.8
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 4.1e-40 169.5 178 51.7
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 4.6e-39 166.0 263 42.2
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 1.5e-37 161.0 238 44.5
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 1.5e-37 161.0 241 44.4
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 1.6e-36 157.5 147 61.9
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 1.0e-35 154.8 188 48.9
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 5.6e-29 132.5 252 37.7
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 1.6e-28 131.0 116 62.1
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 6.6e-22 109.0 317 30.3
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 1.6e-20 104.4 244 34.8
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 6.2e-20 102.4 139 41.7
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 1.8e-19 100.9 309 31.1
BcaC09g50913 Brassica carinata HOM05D006904 ORTHO05D008439 3.4e-18 96.7 86 62.8
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 3.4e-18 96.7 136 47.8
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 1.7e-17 94.4 287 27.9
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 4.4e-10 69.7 58 56.9
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 1.3e-09 68.2 232 31.9
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 2.1e-07 60.8 140 33.6


User provided reference genes

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