Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 5.7e-161 570.9 287 100.0
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 2.7e-142 508.8 270 93.0
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 4.9e-120 434.9 322 71.7
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 4.0e-114 415.2 267 74.5
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 4.4e-113 411.8 268 74.3
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 5.8e-113 411.4 266 74.8
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 4.9e-112 408.3 268 73.5
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 1.9e-111 406.4 268 73.1
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 5.4e-111 404.8 268 73.5
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 9.2e-111 404.1 270 71.5
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 1.7e-109 399.8 268 70.9
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 2.5e-108 396.0 268 69.8
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 1.8e-106 389.8 238 84.5
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 4.0e-106 388.7 208 93.8
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 5.2e-106 388.3 268 70.5
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 1.2e-105 387.1 290 68.3
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 1.5e-105 386.7 265 69.4
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 7.6e-105 384.4 289 67.1
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 1.3e-104 383.6 268 68.3
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 1.7e-104 383.3 267 67.8
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 1.7e-104 383.3 267 67.8
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 2.2e-104 382.9 266 69.5
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 1.9e-103 379.8 273 68.5
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 2.4e-103 379.4 267 67.4
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 3.2e-103 379.0 267 67.4
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 4.2e-103 378.6 268 69.4
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 2.1e-102 376.3 268 68.7
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 2.1e-102 376.3 267 66.7
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 2.1e-102 376.3 268 66.8
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 2.7e-102 375.9 266 68.8
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 4.6e-102 375.2 262 71.0
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 3.0e-101 372.5 283 65.7
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 5.1e-101 371.7 268 68.7
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 6.6e-101 371.3 268 67.2
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 3.6e-99 365.5 267 66.7
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 4.7e-99 365.2 267 68.2
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 1.1e-98 364.0 269 62.5
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 5.3e-98 361.7 276 66.7
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 9.0e-98 360.9 267 64.8
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 9.0e-98 360.9 267 65.2
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 1.5e-97 360.1 270 67.4
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 1.5e-97 360.1 269 61.3
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 5.8e-97 358.2 267 65.2
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 5.8e-97 358.2 266 64.3
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 9.9e-97 357.5 266 66.5
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 1.3e-96 357.1 267 63.7
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 3.8e-96 355.5 268 65.3
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 4.9e-96 355.1 267 64.0
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 1.1e-95 354.0 267 63.7
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 1.4e-95 353.6 267 63.7
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 1.9e-95 353.2 269 62.8
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 3.2e-95 352.4 267 63.3
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 5.4e-95 351.7 269 63.2
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 7.1e-95 351.3 269 62.8
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 9.3e-95 350.9 267 62.5
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 1.2e-94 350.5 269 62.1
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 1.6e-94 350.1 267 61.0
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 6.6e-93 344.7 269 61.3
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 4.3e-92 342.0 269 61.0
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 9.6e-92 340.9 265 62.6
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 1.3e-91 340.5 258 65.5
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 3.6e-91 339.0 269 60.6
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 2.4e-90 336.3 265 62.3
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 1.5e-89 333.6 267 59.6
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 2.2e-88 329.7 267 58.1
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 3.8e-88 328.9 261 61.3
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 4.9e-88 328.6 261 60.9
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 1.9e-87 326.6 261 60.9
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 4.2e-87 325.5 267 58.4
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 1.8e-85 320.1 293 54.9
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 4.3e-84 315.5 267 61.4
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 6.9e-82 308.1 267 59.9
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 4.5e-81 305.4 265 55.5
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 2.5e-79 299.7 268 56.7
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 6.0e-78 295.0 214 67.8
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 7.9e-78 294.7 220 63.6
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 3.0e-77 292.7 203 69.0
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 1.6e-75 287.0 253 58.5
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 4.8e-75 285.4 212 67.5
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 6.9e-74 281.6 292 51.7
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 1.0e-72 277.7 205 64.4
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 3.8e-72 275.8 210 62.4
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 1.1e-71 274.2 260 57.7
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 5.5e-71 271.9 205 62.0
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 1.6e-70 270.4 283 44.5
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 3.5e-70 269.2 270 53.7
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 1.4e-66 257.3 242 55.8
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.7e-59 233.8 195 60.5
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 1.8e-53 213.8 289 45.3
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 2.2e-51 206.8 264 43.2
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 1.4e-50 204.1 122 77.0
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 7.7e-49 198.4 184 57.1
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 8.5e-48 194.9 295 41.7
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 5.2e-45 185.7 97 92.8
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 6.7e-45 185.3 211 45.0
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.4e-42 177.6 94 93.6
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 3.8e-40 169.5 127 66.1
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 5.0e-40 169.1 126 62.7
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 4.7e-38 162.5 110 70.0
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 8.3e-35 151.8 110 70.9
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 1.6e-33 147.5 299 32.8
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.1e-26 124.8 64 89.1
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 4.1e-26 122.9 80 68.8
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 3.3e-23 113.2 285 29.1
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 3.6e-22 109.8 162 32.7
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 6.1e-22 109.0 178 39.3
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 6.1e-22 109.0 89 60.7
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.8e-21 107.5 89 59.6
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.0e-20 104.0 61 78.7
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 3.2e-18 96.7 63 61.9
Atru.chr7.394 Acer truncatum HOM05D006784 ORTHO05D008508 3.9e-16 89.7 72 56.9
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 2.2e-11 73.9 220 29.1
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 8.6e-08 62.0 152 30.9
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 8.6e-08 62.0 152 30.9
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 1.5e-07 61.2 45 64.4
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 1.9e-07 60.8 41 68.3
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 4.3e-07 59.7 152 30.3
FAN20G2451 Fragaria x ananassa HOM05D009889 ORTHO05D003215 1.2e-06 58.2 43 65.1


User provided reference genes

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