Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G564.4 Capsicum annuum HOM05D004264 ORTHO05D004680 1.8e-105 386.0 197 100.0
Solyc04g072210.4 Solanum lycopersicum HOM05D004264 ORTHO05D004680 6.1e-37 158.3 165 58.2
Cc05_g01720 Coffea canephora HOM05D004264 ORTHO05D004680 9.1e-25 117.9 137 50.4
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 2.2e-23 113.2 165 41.2
AUR62030782 Chenopodium quinoa HOM05D004264 ORTHO05D004680 4.2e-22 109.0 117 48.7
Sabra16G0118000 Salix brachista HOM05D004264 ORTHO05D004680 3.6e-21 105.9 139 43.9
AUR62030512 Chenopodium quinoa HOM05D004264 ORTHO05D004680 1.0e-20 104.4 138 42.0
Manes.09G110101 Manihot esculenta HOM05D004264 ORTHO05D004680 2.3e-20 103.2 165 38.2
EL10Ac5g12510 Beta vulgaris HOM05D004264 ORTHO05D004680 6.7e-20 101.7 117 46.2
TWI74G1571 Tripterygium wilfordii HOM05D004264 ORTHO05D004680 1.5e-19 100.5 165 39.4
CiPaw.09G213400 Carya illinoinensis HOM05D004264 ORTHO05D004680 5.7e-19 98.6 165 36.4
Potri.016G122350 Populus trichocarpa HOM05D004264 ORTHO05D004680 5.7e-19 98.6 169 37.9
Lsat_1_v5_gn_6_104820 Lactuca sativa HOM05D004264 ORTHO05D004680 2.2e-18 96.7 188 35.6
Sopen04g028370 Solanum pennellii HOM05D004264 ORTHO05D004680 2.2e-18 96.7 95 55.8
Cfa017136 Carpinus fangiana HOM05D004264 ORTHO05D004680 6.3e-18 95.1 186 33.9
COL.COLO4_14480 Corchorus olitorius HOM05D004264 ORTHO05D004680 6.3e-18 95.1 157 36.9
Atru.chr8.2305 Acer truncatum HOM05D004264 ORTHO05D004680 1.1e-17 94.4 165 37.6
TAR623G1256 Trochodendron aralioides HOM05D004264 ORTHO05D004680 1.1e-17 94.4 189 32.8
Hma1.2p1_0479F.1_g161540 Hydrangea macrophylla HOM05D004264 ORTHO05D004680 2.4e-17 93.2 165 37.0
Actinidia29078 Actinidia chinensis HOM05D004264 ORTHO05D004680 9.1e-17 91.3 165 33.9
Sed0006342 Sechium edule HOM05D004264 ORTHO05D004680 1.5e-16 90.5 186 32.3
Thecc.05G009200 Theobroma cacao HOM05D004264 ORTHO05D004680 2.0e-16 90.1 165 34.5
MBI10_g27417_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 3.5e-16 89.4 150 40.7
Gohir.D01G219000 Gossypium hirsutum HOM05D004264 ORTHO05D004680 4.5e-16 89.0 165 33.3
Gorai.002G265700 Gossypium raimondii HOM05D004264 ORTHO05D004680 4.5e-16 89.0 157 34.4
Duzib106G1969 Durio zibethinus HOM05D004264 ORTHO05D004680 5.9e-16 88.6 191 32.5
Gohir.A01G229100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 5.9e-16 88.6 165 33.3
Actinidia11558 Actinidia chinensis HOM05D004264 ORTHO05D004680 7.7e-16 88.2 181 31.5
Duzib093G0558 Durio zibethinus HOM05D004264 ORTHO05D004680 1.3e-15 87.4 165 33.9
ClCG04G006790 Citrullus lanatus HOM05D004264 ORTHO05D004680 2.9e-15 86.3 165 33.9
Peaxi162Scf00522g00315 Petunia axillaris HOM05D004264 ORTHO05D004680 1.9e-14 83.6 58 79.3
CsaV3_4G026470 Cucumis sativus L. HOM05D004264 ORTHO05D004680 7.2e-14 81.6 165 32.7
PGR004G2045 Punica granatum HOM05D004264 ORTHO05D004680 7.2e-14 81.6 165 33.9
CAN.G1288.1 Capsicum annuum HOM05D000011 ORTHO05D000018 9.4e-14 81.3 43 83.7
Rhsim05G0223700 Rhododendron simsii HOM05D004264 ORTHO05D004680 2.7e-13 79.7 58 69.0
CSS0010779 Camellia sinensis var. sinensis HOM05D004264 ORTHO05D004680 3.6e-13 79.3 64 62.5
Nn8g40771 Nelumbo nucifera HOM05D004264 ORTHO05D004680 6.1e-13 78.6 165 31.5
VMungo1383G0816 Vigna mungo HOM05D004264 ORTHO05D004680 6.1e-13 78.6 164 32.3
Medtr1g100900 Medicago truncatula HOM05D004264 ORTHO05D004680 2.3e-12 76.6 165 31.5
Lj3g0014192 Lotus japonicus HOM05D004264 ORTHO05D004680 3.0e-12 76.3 165 33.3
Hund14916 Selenicereus undatus HOM05D004264 ORTHO05D004680 3.9e-12 75.9 165 31.5
BcaC09g47997 Brassica carinata HOM05D004264 ORTHO05D004680 8.8e-12 74.7 141 33.3
ECA233G6002 Erigeron canadensis HOM05D004264 ORTHO05D004680 8.8e-12 74.7 115 40.9
Lalb_Chr01g0023271 Lupinus albus HOM05D004264 ORTHO05D004680 8.8e-12 74.7 156 34.6
FAN05G3264 Fragaria x ananassa HOM05D004264 ORTHO05D004680 2.0e-11 73.6 165 32.7
PSO339G3729 Papaver somniferum HOM05D004264 ORTHO05D004680 2.0e-11 73.6 165 30.9
PSO801G0087 Papaver somniferum HOM05D004264 ORTHO05D004680 2.0e-11 73.6 165 30.9
THA.LOC104816187 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 2.0e-11 73.6 165 32.1
FAN05G1725 Fragaria x ananassa HOM05D004264 ORTHO05D004680 2.6e-11 73.2 165 32.7
FAN05G1746 Fragaria x ananassa HOM05D004264 ORTHO05D004680 2.6e-11 73.2 165 32.7
PGSC0003DMG400011809 Solanum tuberosum HOM05D000011 ORTHO05D000018 3.3e-11 72.8 43 69.8
FAN02G3507 Fragaria x ananassa HOM05D004264 ORTHO05D004680 4.4e-11 72.4 165 32.1
FAN09G4226 Fragaria x ananassa HOM05D004264 ORTHO05D004680 5.7e-11 72.0 165 31.5
CAN.G1591.9 Capsicum annuum HOM05D000011 ORTHO05D000018 7.4e-11 71.6 83 51.8
Thhalv10021618m.g Eutrema salsugineum HOM05D004264 ORTHO05D004680 9.7e-11 71.2 140 33.6
CAN.G1591.12 Capsicum annuum HOM05D000011 ORTHO05D000018 1.7e-10 70.5 44 77.3
MD12G1177600 Malus domestica HOM05D004264 ORTHO05D004680 2.2e-10 70.1 155 29.0
MD04G1163700 Malus domestica HOM05D004264 ORTHO05D004680 3.7e-10 69.3 148 29.1
MBI03_g10315_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 4.8e-10 68.9 135 37.0
Sp3g07270 Schrenkiella parvula HOM05D004264 ORTHO05D004680 6.3e-10 68.6 117 38.5
CARHR083200 Cardamine hirsuta HOM05D004264 ORTHO05D004680 8.2e-10 68.2 165 29.1
Solyc02g027080.2 Solanum lycopersicum HOM05D000011 ORTHO05D000018 2.4e-09 66.6 43 67.4
BcaC09g48040 Brassica carinata HOM05D004264 ORTHO05D004680 3.1e-09 66.2 141 30.5
BNapus_Darmor_BZH_scaffold_167p00190 Brassica napus HOM05D004264 ORTHO05D004680 3.1e-09 66.2 141 30.5
BraA01t04327Z Brassica rapa HOM05D004264 ORTHO05D004680 3.1e-09 66.2 137 31.4
Glyma.18G205200 Glycine max HOM05D004264 ORTHO05D004680 4.1e-09 65.9 166 29.5
Sopen02g009360 Solanum pennellii HOM05D000011 ORTHO05D000018 4.1e-09 65.9 65 50.8
CAN.G564.6 Capsicum annuum HOM05D000011 ORTHO05D000018 5.3e-09 65.5 43 65.1
Glyma.07G154451 Glycine max HOM05D004264 ORTHO05D004680 5.3e-09 65.5 166 29.5
Ah.12g058940 Amaranthus hybridus HOM05D004264 ORTHO05D004680 7.0e-09 65.1 124 34.7
Psat3g124240 Pisum sativum HOM05D004264 ORTHO05D004680 7.0e-09 65.1 160 29.4
THA.LOC104827057 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 1.2e-08 64.3 166 30.1
CAN.G1357.2 Capsicum annuum HOM05D000011 ORTHO05D000018 1.6e-08 63.9 43 69.8
DCAR_015367 Daucus carota HOM05D004264 ORTHO05D004680 2.0e-08 63.5 186 26.3
AT3G08880 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 2.6e-08 63.2 165 27.9
CANSAT35G1133 Cannabis sativa HOM05D004264 ORTHO05D004680 2.6e-08 63.2 78 46.2
Carub.0003s0799 Capsella rubella HOM05D004264 ORTHO05D004680 4.5e-08 62.4 60 51.7
HanXRQChr13g0390241 Helianthus annuus HOM05D004264 ORTHO05D004680 4.5e-08 62.4 90 38.9
CAN.G143.63 Capsicum annuum HOM05D000011 ORTHO05D000018 5.9e-08 62.0 80 43.8
Phvul.008G094300 Phaseolus vulgaris HOM05D004264 ORTHO05D004680 5.9e-08 62.0 179 26.8
PSO782G0806 Papaver somniferum HOM05D004264 ORTHO05D004680 1.0e-07 61.2 58 51.7
CAN.G1578.8 Capsicum annuum HOM05D000011 ORTHO05D000018 2.2e-07 60.1 43 67.4
CAN.G308.19 Capsicum annuum HOM05D000011 ORTHO05D000018 2.2e-07 60.1 43 62.8
CAN.G3324.1 Capsicum annuum HOM05D000011 ORTHO05D000018 2.2e-07 60.1 43 67.4
HanXRQChr02g0036811 Helianthus annuus HOM05D004264 ORTHO05D004680 2.2e-07 60.1 103 36.9
AL3G19870 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 2.9e-07 59.7 165 27.9
BcaB04g18563 Brassica carinata HOM05D004264 ORTHO05D004680 5.0e-07 58.9 139 29.5
RcHm_v2.0_Chr3g0462171 Rosa chinensis HOM05D004264 ORTHO05D004680 5.0e-07 58.9 53 52.8
Zm00001eb423320 Zea mays HOM05D004264 ORTHO05D004680 8.5e-07 58.2 83 41.0
FvH4_6g10921 Fragaria vesca HOM05D004264 ORTHO05D004680 1.9e-06 57.0 50 54.0
AT5G01570 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 3.2e-06 56.2 64 46.9
unitig_88.g27662 Utricularia gibba HOM05D004264 ORTHO05D004680 4.2e-06 55.8 122 32.8
Ciclev10013172m.g Citrus clementina HOM05D004264 ORTHO05D004680 5.5e-06 55.5 99 34.3
unitig_0.g2545 Utricularia gibba HOM05D004264 ORTHO05D004680 7.2e-06 55.1 96 38.5


User provided reference genes

Program Settings