Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 4.9e-61 237.7 124 100.0
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 2.2e-37 159.1 112 76.8
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 3.3e-33 145.2 124 66.1
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 5.7e-33 144.4 108 73.1
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 1.3e-29 133.3 112 62.5
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-29 133.3 108 63.0
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.9e-29 132.1 104 67.3
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 1.9e-28 129.4 105 65.7
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 1.6e-27 126.3 87 77.0
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.1e-27 125.9 114 60.5
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 1.4e-26 123.2 113 59.3
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-24 115.2 120 55.0
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-24 115.2 111 57.7
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-23 113.2 129 51.9
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 9.1e-23 110.5 85 69.4
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.7e-22 107.5 114 53.5
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-20 103.2 102 54.9
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.9e-20 102.8 108 52.8
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 3.2e-20 102.1 124 50.8
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-20 102.1 129 48.1
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.2e-20 101.7 118 50.8
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.2e-20 100.9 108 55.6
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 3.6e-19 98.6 86 65.1
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 3.6e-19 98.6 98 55.1
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-18 97.1 110 50.0
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-18 96.7 126 48.4
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-18 96.7 113 49.6
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.8e-18 94.4 127 45.7
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.8e-17 90.5 109 48.6
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-16 89.4 112 48.2
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.8e-16 89.0 106 50.0
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 1.1e-15 87.0 92 52.2
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 1.1e-15 87.0 114 44.7
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-15 86.3 109 47.7
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.4e-15 85.9 104 51.0
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 1.2e-14 83.6 71 60.6
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.5e-14 81.6 64 65.6
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.0e-13 80.5 129 44.2
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.0e-13 80.5 122 41.8
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 5.0e-13 78.2 68 60.3
Solyc05g150111.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.9e-12 76.3 74 62.2
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-11 73.6 63 57.1
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-11 72.8 117 41.9
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-11 72.4 87 49.4
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.6e-11 72.0 97 47.4
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.1e-11 71.2 92 46.7
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.0e-11 70.9 86 44.2
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-10 70.5 76 48.7
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 3.0e-10 68.9 51 68.6
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.2e-10 68.2 66 51.5
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.2e-10 68.2 97 45.4
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.2e-10 68.2 68 48.5
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.2e-10 68.2 66 47.0
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.8e-10 67.8 67 53.7
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.8e-10 67.8 94 38.3
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.8e-10 67.8 97 37.1
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.8e-10 67.4 62 50.0
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.6e-09 65.9 99 40.4
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 3.4e-09 65.5 67 46.3
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.7e-09 64.7 86 44.2
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.5e-09 64.3 59 55.9
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.5e-09 64.3 59 50.8
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-08 63.2 109 33.0
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.7e-08 63.2 70 48.6
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-08 63.2 94 36.2
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.8e-08 62.4 94 44.7
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.3e-08 61.2 86 41.9
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.3e-08 61.2 94 35.1
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 8.3e-08 60.8 86 40.7
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.3e-08 60.8 68 42.6
Sc22g0004340 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.1e-07 60.5 91 39.6
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-07 60.5 59 47.5
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-07 60.1 97 33.0
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.8e-07 59.7 86 41.9
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 2.4e-07 59.3 98 38.8
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-07 59.3 97 36.1
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.1e-07 58.9 77 44.2
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.0e-07 57.8 51 52.9
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 7.0e-07 57.8 51 52.9
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 1.2e-06 57.0 102 37.3
Sc03g0005860 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.2e-06 57.0 91 39.6
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.7e-06 55.8 97 32.0
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 2.7e-06 55.8 76 39.5
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 3.5e-06 55.5 78 38.5
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.5e-06 55.1 52 51.9
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 7.7e-06 54.3 99 36.4


User provided reference genes

Program Settings