Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G561.27 Capsicum annuum HOM05D000101 ORTHO05D000089 4.3e-68 261.2 128 100.0
Sopen08g004810 Solanum pennellii HOM05D000101 ORTHO05D000089 9.4e-31 137.1 81 76.5
Solyc08g013960.1 Solanum lycopersicum HOM05D000101 ORTHO05D012848 1.2e-30 136.7 79 79.7
PGSC0003DMG400012466 Solanum tuberosum HOM05D000101 ORTHO05D000089 1.6e-30 136.3 84 76.2
CAN.G1227.23 Capsicum annuum HOM05D000101 ORTHO05D000089 6.1e-30 134.4 79 81.0
PGSC0003DMG400012472 Solanum tuberosum HOM05D000101 ORTHO05D000089 2.3e-29 132.5 79 79.7
CAN.G2.66 Capsicum annuum HOM05D000101 ORTHO05D000089 3.3e-28 128.6 84 73.8
CAN.G2.59 Capsicum annuum HOM05D000101 ORTHO05D000089 7.4e-28 127.5 77 80.5
PGSC0003DMG400012471 Solanum tuberosum HOM05D000101 ORTHO05D000089 3.7e-27 125.2 84 73.8
PGSC0003DMG400002275 Solanum tuberosum HOM05D000092 ORTHO05D000089 4.8e-27 124.8 79 74.7
CAN.G845.5 Capsicum annuum HOM05D000101 ORTHO05D000089 4.5e-25 118.2 84 70.2
Nitab4.5_0002683g0080 Nicotiana tabacum HOM05D000101 ORTHO05D000089 4.5e-25 118.2 80 66.2
PGSC0003DMG400002276 Solanum tuberosum HOM05D000101 ORTHO05D000089 1.3e-24 116.7 98 61.2
Nitab4.5_0002683g0040 Nicotiana tabacum HOM05D000101 ORTHO05D000089 1.7e-24 116.3 80 66.2
CAN.G137.49 Capsicum annuum HOM05D000101 ORTHO05D000089 2.2e-24 115.9 73 75.3
Nitab4.5_0005412g0010 Nicotiana tabacum HOM05D000101 ORTHO05D000089 6.5e-24 114.4 84 66.7
Peaxi162Scf00102g00936 Petunia axillaris HOM05D000101 ORTHO05D000089 1.5e-23 113.2 83 66.3
Nitab4.5_0003152g0120 Nicotiana tabacum HOM05D000101 ORTHO05D000089 5.5e-23 111.3 80 61.2
Nitab4.5_0005412g0020 Nicotiana tabacum HOM05D000101 ORTHO05D000089 7.2e-23 110.9 80 61.2
Nitab4.5_0000185g0090 Nicotiana tabacum HOM05D000101 ORTHO05D000089 1.2e-22 110.2 80 62.5
CAN.G845.7 Capsicum annuum HOM05D000101 ORTHO05D000089 2.7e-22 109.0 77 67.5
Solyc06g048910.2 Solanum lycopersicum HOM05D000101 ORTHO05D000089 2.7e-22 109.0 79 68.4
CAN.G285.2 Capsicum annuum HOM05D000101 ORTHO05D000089 3.6e-22 108.6 96 58.3
PGSC0003DMG400019083 Solanum tuberosum HOM05D000101 ORTHO05D000089 4.7e-22 108.2 84 60.7
Nitab4.5_0000185g0080 Nicotiana tabacum HOM05D000101 ORTHO05D000089 1.0e-21 107.1 85 64.7
Nitab4.5_0006415g0010 Nicotiana tabacum HOM05D000101 ORTHO05D012848 2.6e-20 102.4 86 62.8
Nitab4.5_0000185g0070 Nicotiana tabacum HOM05D000101 ORTHO05D000089 6.3e-19 97.8 79 58.2
CAN.G845.14 Capsicum annuum HOM05D000101 ORTHO05D000089 5.3e-18 94.7 79 59.5
Dinv22309 Davidia involucrata HOM05D000101 ORTHO05D000089 4.4e-12 75.1 87 43.7
Hma1.2p1_2028F.1_g311700 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 4.4e-12 75.1 87 39.1
Actinidia09962 Actinidia chinensis HOM05D000101 ORTHO05D000089 1.4e-10 70.1 78 41.0
TAR627G0768 Trochodendron aralioides HOM05D000101 ORTHO05D000089 7.0e-10 67.8 106 31.1
TAR636G0948 Trochodendron aralioides HOM05D000101 ORTHO05D000089 2.7e-09 65.9 101 32.7
Cfa020427 Carpinus fangiana HOM05D000101 ORTHO05D000089 2.2e-08 62.8 102 35.3
Sopen07g005680 Solanum pennellii HOM05D000101 ORTHO05D011739 5.0e-08 61.6 40 70.0
CAN.G845.4 Capsicum annuum HOM05D000101 ORTHO05D000089 1.9e-07 59.7 36 77.8
Cfa020430 Carpinus fangiana HOM05D000101 ORTHO05D000089 4.2e-07 58.5 118 30.5
TAR626G0387 Trochodendron aralioides HOM05D000092 ORTHO05D000089 1.6e-06 56.6 81 33.3
CAN.G845.1 Capsicum annuum HOM05D000101 ORTHO05D000089 2.1e-06 56.2 55 54.5
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 4.7e-06 55.1 80 36.2


User provided reference genes

Program Settings