Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 0.0e+00 1092.8 549 100.0
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 2.5e-258 895.2 540 84.3
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 6.2e-257 890.6 535 84.1
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 7.1e-253 877.1 535 83.2
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 2.1e-252 875.5 540 81.1
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 4.6e-252 874.4 548 81.2
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 1.6e-233 812.8 541 76.5
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 2.4e-176 622.9 486 63.8
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 2.5e-173 612.8 554 58.3
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 9.2e-168 594.3 516 59.7
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 4.6e-167 592.0 497 58.4
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 7.8e-167 591.3 477 61.8
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.3e-166 589.7 472 62.1
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 6.6e-166 588.2 445 64.0
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 8.6e-166 587.8 529 57.1
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 1.1e-165 587.4 428 65.0
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 1.5e-165 587.0 541 55.5
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 2.5e-165 586.3 538 55.8
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 2.5e-165 586.3 479 59.9
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 3.6e-164 582.4 538 55.0
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 3.1e-163 579.3 539 55.3
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 4.4e-162 575.5 543 56.4
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 1.3e-161 573.9 492 60.6
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.9e-160 570.1 423 63.1
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 4.1e-160 568.9 465 59.8
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 1.6e-159 567.0 523 55.3
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 3.5e-159 565.8 423 62.4
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 1.0e-158 564.3 417 65.2
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 1.0e-158 564.3 476 57.6
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 1.0e-158 564.3 470 58.7
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 3.9e-158 562.4 462 59.7
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 6.6e-158 561.6 423 62.2
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 8.6e-158 561.2 425 61.4
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 8.6e-158 561.2 476 57.4
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 8.6e-158 561.2 481 57.8
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 1.1e-157 560.8 477 57.7
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 3.3e-157 559.3 479 56.6
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 5.6e-157 558.5 507 54.6
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 9.5e-157 557.8 466 58.6
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 2.1e-156 556.6 466 58.4
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 2.8e-156 556.2 469 58.2
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 2.8e-156 556.2 520 54.2
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 2.8e-156 556.2 488 57.0
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 3.6e-156 555.8 470 58.5
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 3.6e-156 555.8 511 56.2
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 4.7e-156 555.4 419 62.8
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 2.4e-155 553.1 538 53.9
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 5.2e-155 552.0 507 55.8
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 2.0e-154 550.1 523 53.5
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 1.7e-153 547.0 480 57.5
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 2.2e-153 546.6 417 61.2
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 2.4e-152 543.1 511 53.6
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 7.1e-152 541.6 407 62.7
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 1.2e-151 540.8 496 54.8
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 1.1e-149 534.3 479 56.6
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 1.1e-149 534.3 398 62.8
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 1.1e-149 534.3 445 59.3
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 3.3e-149 532.7 398 62.6
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 3.3e-149 532.7 418 59.1
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 9.6e-149 531.2 411 61.6
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 9.6e-149 531.2 454 57.9
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 1.3e-148 530.8 481 56.1
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 2.8e-148 529.6 489 54.8
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 2.8e-148 529.6 506 52.4
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 1.1e-147 527.7 478 56.3
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 3.1e-147 526.2 487 55.2
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 4.0e-147 525.8 507 54.2
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 6.9e-147 525.0 448 57.4
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 6.9e-147 525.0 482 54.6
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 2.6e-146 523.1 496 53.8
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 7.6e-146 521.5 395 60.5
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 2.4e-144 516.5 496 54.0
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 5.1e-142 508.8 379 62.3
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 1.1e-141 507.7 483 53.6
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 1.3e-140 504.2 485 54.0
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 1.6e-140 503.8 543 49.5
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 3.6e-140 502.7 483 53.4
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 1.1e-139 501.1 457 55.8
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 1.1e-139 501.1 514 51.8
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 6.9e-139 498.4 483 53.0
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 1.9e-133 480.3 456 54.8
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 7.9e-127 458.4 360 57.8
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 2.3e-118 430.3 295 70.2
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 6.9e-115 418.7 388 50.8
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 1.5e-114 417.5 415 49.4
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 3.8e-113 412.9 291 66.3
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 8.5e-113 411.8 401 50.9
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 5.5e-112 409.1 290 66.9
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 1.5e-109 401.0 344 55.5
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 9.1e-107 391.7 287 63.4
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 3.7e-100 369.8 299 61.2
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 1.0e-94 351.7 285 58.2
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 5.2e-94 349.4 425 46.4
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.2e-87 328.2 486 39.3
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 8.0e-87 325.5 338 47.3
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 2.3e-86 323.9 338 47.0
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 5.2e-86 322.8 265 62.3
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.5e-85 321.2 539 38.0
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 4.8e-84 316.2 235 65.5
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 4.5e-82 309.7 221 63.8
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 6.5e-81 305.8 227 64.8
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 8.3e-76 288.9 250 60.0
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 2.6e-61 240.7 537 32.2
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.3e-60 238.4 165 67.3
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 2.4e-59 234.2 317 40.4
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 1.3e-57 228.4 290 43.8
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 2.3e-46 191.0 302 34.4
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 3.6e-39 167.2 223 44.4
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 5.2e-38 163.3 225 41.8
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 1.5e-37 161.8 103 75.7
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 4.4e-37 160.2 179 45.8
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 1.3e-36 158.7 227 40.5
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 3.8e-36 157.1 255 39.2
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 2.3e-33 147.9 400 29.5
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 3.0e-33 147.5 272 33.5
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 8.1e-31 139.4 107 64.5
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 3.0e-25 120.9 88 67.0
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 5.6e-24 116.7 129 45.0
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 1.5e-21 108.6 202 36.1
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 1.4e-19 102.1 98 51.0
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 5.3e-14 83.6 66 68.2
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 3.4e-13 80.9 63 57.1
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 5.1e-09 67.0 35 71.4
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.7e-09 66.6 51 62.7
SEGI_04489 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 6.9e-06 56.6 37 64.9


User provided reference genes

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