Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G56.21 Capsicum annuum HOM05D001147 ORTHO05D000823 4.7e-33 144.1 79 100.0
CAN.G606.1 Capsicum annuum HOM05D001147 ORTHO05D000823 4.7e-33 144.1 79 100.0
CAN.G504.77 Capsicum annuum HOM05D001147 ORTHO05D000823 4.3e-26 120.9 79 86.1
CAN.G759.5 Capsicum annuum HOM05D000185 ORTHO05D000823 2.1e-25 118.6 78 79.5
CAN.G782.28 Capsicum annuum HOM05D001147 ORTHO05D000823 1.1e-21 106.3 76 78.9
Solyc01g106100.2 Solanum lycopersicum HOM05D001147 ORTHO05D000823 7.3e-18 93.6 85 65.9
Sopen01g048490 Solanum pennellii HOM05D001147 ORTHO05D000823 7.3e-18 93.6 85 65.9
PGSC0003DMG400010672 Solanum tuberosum HOM05D001147 ORTHO05D000823 1.3e-17 92.8 89 62.9
Nitab4.5_0005908g0060 Nicotiana tabacum HOM05D001147 ORTHO05D000823 1.8e-16 89.0 75 68.0
Nitab4.5_0002750g0010 Nicotiana tabacum HOM05D001147 ORTHO05D000823 2.9e-14 81.6 77 64.9
CAN.G13221.1 Capsicum annuum HOM05D001147 ORTHO05D000823 8.4e-14 80.1 49 83.7
Peaxi162Scf00299g00036 Petunia axillaris HOM05D003076 ORTHO05D000823 1.0e-11 73.2 86 58.1
HanXRQChr10g0297711 Helianthus annuus HOM05D001147 ORTHO05D000823 1.9e-10 68.9 61 60.7
CSS0032070 Camellia sinensis var. sinensis HOM05D001147 ORTHO05D000823 2.5e-10 68.6 55 60.0
Cc02_g20730 Coffea canephora HOM05D001147 ORTHO05D000823 2.5e-10 68.6 62 62.9
Lalb_Chr20g0122791 Lupinus albus HOM05D003076 ORTHO05D000823 2.5e-10 68.6 70 52.9
TWI59G0855 Tripterygium wilfordii HOM05D000851 ORTHO05D000823 2.5e-10 68.6 57 63.2
Actinidia28022 Actinidia chinensis HOM05D000198 ORTHO05D003232 3.3e-10 68.2 76 52.6
Lalb_Chr18g0060361 Lupinus albus HOM05D001147 ORTHO05D000823 4.3e-10 67.8 70 54.3
TWI14G1081 Tripterygium wilfordii HOM05D003076 ORTHO05D000823 1.6e-09 65.9 55 61.8
Ca_00174_v3 Cicer arietinum L. HOM05D003076 ORTHO05D000823 2.1e-09 65.5 58 60.3
Psat1g214240 Pisum sativum HOM05D003076 ORTHO05D000823 3.7e-09 64.7 70 52.9
Dinv08984 Davidia involucrata HOM05D000026 ORTHO05D000127 4.8e-09 64.3 66 51.5
Glyma.07G183700 Glycine max HOM05D003076 ORTHO05D000823 6.2e-09 63.9 59 55.9
Thecc.02G126800 Theobroma cacao HOM05D001147 ORTHO05D000823 6.2e-09 63.9 52 61.5
RcHm_v2.0_Chr6g0270031 Rosa chinensis HOM05D003076 ORTHO05D000823 8.1e-09 63.5 55 63.6
Duzib132G0186 Durio zibethinus HOM05D001147 ORTHO05D000823 1.1e-08 63.2 63 52.4
Lsat_1_v5_gn_5_110461 Lactuca sativa HOM05D001147 ORTHO05D000823 1.1e-08 63.2 55 54.5
VMungo0251G1196 Vigna mungo HOM05D001147 ORTHO05D000823 1.1e-08 63.2 57 56.1
Glyma.15G059100 Glycine max HOM05D003076 ORTHO05D000823 1.4e-08 62.8 49 67.3
Lalb_Chr15g0090301 Lupinus albus HOM05D003076 ORTHO05D000823 1.4e-08 62.8 76 48.7
VMungo0540G1645 Vigna mungo HOM05D003076 ORTHO05D000823 1.4e-08 62.8 53 64.2
Phvul.006G200900 Phaseolus vulgaris HOM05D001147 ORTHO05D000823 1.8e-08 62.4 49 65.3
QL11p026401 Quercus lobata HOM05D001147 ORTHO05D000823 1.8e-08 62.4 77 46.8
Atru.chr6.1317 Acer truncatum HOM05D001147 ORTHO05D000823 2.4e-08 62.0 54 55.6
COL.COLO4_32417 Corchorus olitorius HOM05D001147 ORTHO05D000823 3.1e-08 61.6 78 47.4
Haze_10471 Corylus avellana HOM05D001147 ORTHO05D000823 3.1e-08 61.6 71 53.5
DCAR_001846 Daucus carota HOM05D003076 ORTHO05D000823 3.1e-08 61.6 55 56.4
Lj4g0005943 Lotus japonicus HOM05D001147 ORTHO05D000823 3.1e-08 61.6 57 54.4
Medtr4g093150 Medicago truncatula HOM05D001147 ORTHO05D000823 3.1e-08 61.6 77 48.1
QL11p025923 Quercus lobata HOM05D001147 ORTHO05D000823 3.1e-08 61.6 77 45.5
Glyma.08G066500 Glycine max HOM05D001147 ORTHO05D000823 4.0e-08 61.2 62 53.2
Glyma.13G255600 Glycine max HOM05D003076 ORTHO05D000823 5.3e-08 60.8 56 62.5
Lalb_Chr09g0326981 Lupinus albus HOM05D001147 ORTHO05D000823 5.3e-08 60.8 61 54.1
CiPaw.06G159200 Carya illinoinensis HOM05D001147 ORTHO05D000823 6.9e-08 60.5 55 60.0
DCAR_021900 Daucus carota HOM05D001147 ORTHO05D000823 6.9e-08 60.5 50 66.0
Gohir.D13G048800 Gossypium hirsutum HOM05D001147 ORTHO05D000823 6.9e-08 60.5 63 52.4
Gorai.013G054500 Gossypium raimondii HOM05D001147 ORTHO05D000823 6.9e-08 60.5 63 52.4
ECA234G2491 Erigeron canadensis HOM05D001147 ORTHO05D000823 9.0e-08 60.1 61 55.7
Prupe.8G073500 Prunus persica HOM05D001147 ORTHO05D000823 9.0e-08 60.1 52 61.5
AUR62030931 Chenopodium quinoa HOM05D003076 ORTHO05D000823 1.5e-07 59.3 69 47.8
Medtr2g009770 Medicago truncatula HOM05D003076 ORTHO05D000823 1.5e-07 59.3 69 52.2
TPR.G9486 Trifolium pratense HOM05D003076 ORTHO05D000823 1.5e-07 59.3 71 50.7
Ah.01g007320 Amaranthus hybridus HOM05D001147 ORTHO05D000823 2.0e-07 58.9 69 52.2
Oeu059898.1 Olea europaea HOM05D001147 ORTHO05D000823 2.0e-07 58.9 66 48.5
Cfa004826 Carpinus fangiana HOM05D001147 ORTHO05D000823 4.5e-07 57.8 44 68.2
Lj6g0014397 Lotus japonicus HOM05D001147 ORTHO05D000823 4.5e-07 57.8 62 54.8
Manes.07G043300 Manihot esculenta HOM05D001147 ORTHO05D000823 4.5e-07 57.8 81 46.9
AUR62027091 Chenopodium quinoa HOM05D003076 ORTHO05D000823 5.8e-07 57.4 69 46.4
MSTRG.16625 Avicennia marina HOM05D001147 ORTHO05D000823 1.3e-06 56.2 61 55.7
Lalb_Chr05g0217941 Lupinus albus HOM05D001147 ORTHO05D000823 1.3e-06 56.2 78 48.7
Sc08g0004010 Simmondsia chinensis HOM05D001147 ORTHO05D000823 1.3e-06 56.2 55 56.4
FvH4_2g11370 Fragaria vesca HOM05D003076 ORTHO05D000823 1.7e-06 55.8 65 55.4
FAN24G2765 Fragaria x ananassa HOM05D012152 ORTHO05D015119 1.7e-06 55.8 65 55.4
THA.LOC104804423 Tarenaya hassleriana HOM05D001147 ORTHO05D000823 1.7e-06 55.8 59 50.8
THA.LOC104807189 Tarenaya hassleriana HOM05D001147 ORTHO05D000823 1.7e-06 55.8 73 46.6
Potri.009G078800 Populus trichocarpa HOM05D001147 ORTHO05D000823 2.2e-06 55.5 69 49.3
Ca_18403_v3 Cicer arietinum L. HOM05D001147 ORTHO05D000823 3.8e-06 54.7 78 46.2
BraA06t24557Z Brassica rapa HOM05D001147 ORTHO05D000823 8.4e-06 53.5 63 47.6
Carub.0001s1788 Capsella rubella HOM05D001147 ORTHO05D000823 8.4e-06 53.5 69 49.3
Gohir.A13G050000 Gossypium hirsutum HOM05D001147 ORTHO05D000823 8.4e-06 53.5 58 51.7


User provided reference genes

Program Settings