Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 3.6e-118 428.3 224 100.0
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 5.6e-87 324.7 225 79.6
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 5.4e-82 308.1 226 73.5
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 1.9e-74 283.1 227 70.9
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 2.7e-73 279.3 191 80.6
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 4.4e-68 261.9 201 70.1
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 9.3e-34 147.9 225 41.8
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 6.7e-32 141.7 227 41.0
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 2.5e-31 139.8 216 39.4
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 1.3e-30 137.5 218 39.4
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 1.1e-29 134.4 218 39.0
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 7.6e-28 128.3 208 43.8
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 1.3e-27 127.5 207 39.6
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 2.5e-26 123.2 201 38.8
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 9.3e-26 121.3 180 46.7
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 1.0e-24 117.9 233 36.9
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 3.9e-24 115.9 167 40.7
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 6.7e-24 115.2 219 36.5
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 8.7e-24 114.8 205 40.0
SGA_v2.0_scaffold57G20206 Striga asiatica HOM05D008610 ORTHO05D010832 5.7e-23 112.1 205 36.6
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 3.7e-22 109.4 147 45.6
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 4.8e-22 109.0 196 37.2
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 1.1e-21 107.8 225 35.1
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 6.9e-21 105.1 205 37.6
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 3.4e-20 102.8 176 40.9
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 4.5e-20 102.4 159 42.1
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 5.9e-20 102.1 157 40.1
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 1.7e-19 100.5 176 40.9
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 1.7e-19 100.5 160 41.9
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 1.9e-18 97.1 154 39.0
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 1.6e-17 94.0 207 37.7
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 4.6e-17 92.4 162 37.7
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 5.1e-16 89.0 175 37.1
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 3.3e-15 86.3 168 37.5
PSO170G6844 Papaver somniferum HOM05D008610 ORTHO05D010832 4.8e-14 82.4 255 29.4
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 6.3e-14 82.0 166 36.7
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 3.1e-13 79.7 170 34.7
CsaV3_3G014190 Cucumis sativus L. HOM05D008610 ORTHO05D010832 1.2e-12 77.8 156 34.0
MELO3C006612.2 Cucumis melo HOM05D008610 ORTHO05D010832 5.0e-11 72.4 181 33.7
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 5.0e-11 72.4 148 36.5
ATR0706G219 Amborella trichopoda HOM05D008610 ORTHO05D010832 6.5e-11 72.0 221 31.2
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 4.2e-10 69.3 187 31.0
Nn3g21308 Nelumbo nucifera HOM05D008610 ORTHO05D010832 4.4e-07 59.3 133 33.8
Atru.chr4.2765 Acer truncatum HOM05D008610 ORTHO05D010832 9.7e-07 58.2 99 36.4


User provided reference genes

Program Settings