Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 3.1e-57 224.9 115 100.0
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 2.5e-51 205.3 115 87.8
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 3.3e-51 204.9 115 87.8
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 1.4e-49 199.5 115 86.1
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 2.0e-48 195.7 111 88.3
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 5.8e-48 194.1 115 86.1
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 5.8e-48 194.1 115 84.3
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 1.5e-43 179.5 114 75.4
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 7.3e-43 177.2 111 77.5
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 2.1e-42 175.6 111 76.6
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 2.8e-42 175.3 114 71.1
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 4.8e-42 174.5 113 74.3
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 6.2e-42 174.1 111 72.1
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 1.1e-41 173.3 114 72.8
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 1.1e-41 173.3 111 76.6
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 1.4e-41 172.9 111 72.1
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.8e-41 172.6 111 73.0
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.8e-41 172.6 113 73.5
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 1.8e-41 172.6 113 73.5
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 2.4e-41 172.2 111 72.1
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 3.1e-41 171.8 110 74.5
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.5e-40 169.5 111 73.0
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 1.5e-40 169.5 113 70.8
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 1.5e-40 169.5 110 72.7
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 1.5e-40 169.5 110 72.7
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 1.5e-40 169.5 113 72.6
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 2.6e-40 168.7 113 69.0
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 3.4e-40 168.3 111 73.0
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 3.4e-40 168.3 111 71.2
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 4.5e-40 167.9 111 73.9
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 5.8e-40 167.5 113 70.8
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 1.3e-39 166.4 113 72.6
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 1.7e-39 166.0 111 72.1
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.7e-39 166.0 111 72.1
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 3.8e-39 164.9 114 70.2
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.8e-39 164.9 114 70.2
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 3.8e-39 164.9 113 68.1
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 4.9e-39 164.5 113 67.3
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 6.4e-39 164.1 114 69.3
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 1.1e-38 163.3 114 70.2
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 1.1e-38 163.3 114 68.4
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 1.4e-38 162.9 108 69.4
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.9e-38 162.5 114 68.4
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.9e-38 162.5 114 69.3
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.4e-38 162.2 114 67.5
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 3.2e-38 161.8 113 67.3
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 4.2e-38 161.4 108 69.4
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 5.5e-38 161.0 111 69.4
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 5.5e-38 161.0 111 67.6
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 9.3e-38 160.2 111 67.6
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 9.3e-38 160.2 111 66.7
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 1.2e-37 159.8 107 71.0
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 1.6e-37 159.5 110 67.3
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 2.7e-37 158.7 115 67.8
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 2.7e-37 158.7 111 66.7
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 3.5e-37 158.3 110 68.2
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 7.9e-37 157.1 113 66.4
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 7.9e-37 157.1 110 67.3
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 1.3e-36 156.4 113 64.6
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 1.3e-36 156.4 110 67.3
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 1.3e-36 156.4 113 65.5
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 1.8e-36 156.0 114 64.0
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 1.8e-36 156.0 111 68.5
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 2.3e-36 155.6 113 64.6
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 3.9e-36 154.8 110 66.4
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 5.1e-36 154.5 113 66.4
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 5.1e-36 154.5 111 64.0
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 6.7e-36 154.1 113 63.7
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 6.7e-36 154.1 113 64.6
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 6.7e-36 154.1 113 64.6
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 8.7e-36 153.7 111 64.9
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 8.7e-36 153.7 113 65.5
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 8.7e-36 153.7 113 63.7
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 8.7e-36 153.7 113 64.6
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 8.7e-36 153.7 113 64.6
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 8.7e-36 153.7 113 63.7
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 8.7e-36 153.7 113 64.6
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 1.1e-35 153.3 111 64.0
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 1.1e-35 153.3 110 66.4
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 1.5e-35 152.9 113 65.5
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 1.5e-35 152.9 113 63.7
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 1.5e-35 152.9 153 55.6
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 1.9e-35 152.5 110 64.5
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 2.5e-35 152.1 110 65.5
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.5e-35 152.1 111 64.9
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 3.3e-35 151.8 111 64.9
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 1.3e-34 149.8 111 64.0
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 1.6e-34 149.4 110 62.7
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 2.1e-34 149.1 104 69.2
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 6.2e-34 147.5 111 64.0
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 6.2e-34 147.5 113 61.1
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 6.2e-34 147.5 110 63.6
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 6.2e-34 147.5 110 60.0
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 6.2e-34 147.5 110 62.7
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 1.4e-33 146.4 113 62.8
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 1.4e-33 146.4 111 64.0
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 1.8e-33 146.0 111 64.9
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 5.3e-33 144.4 114 60.5
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 3.8e-31 138.3 98 65.3
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 4.9e-31 137.9 111 57.7
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 1.4e-30 136.3 96 66.7
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 1.4e-30 136.3 96 66.7
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.5e-30 135.6 115 56.5
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 5.5e-30 134.4 111 54.1
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 1.1e-27 126.7 113 59.3
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 4.8e-26 121.3 111 54.1
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 1.4e-25 119.8 77 71.4
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.4e-25 119.0 91 60.4
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 4.1e-25 118.2 93 58.1
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 9.0e-25 117.1 107 53.3
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.5e-24 116.3 94 53.2
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.1e-22 110.2 111 53.2
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 9.3e-22 107.1 115 48.7
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.8e-17 92.8 66 62.1
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 5.3e-17 91.3 100 48.0
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 1.4e-14 83.2 119 37.0
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 9.4e-14 80.5 112 41.1
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 6.1e-13 77.8 51 74.5
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 7.9e-13 77.4 111 41.4
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 2.0e-11 72.8 100 36.0
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 4.1e-09 65.1 105 33.3


User provided reference genes

Program Settings