Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 3.0e-106 388.7 212 100.0
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 2.4e-92 342.4 212 88.7
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 4.2e-92 341.7 211 89.1
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 5.1e-90 334.7 223 82.5
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.9e-89 332.8 223 82.5
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 4.9e-77 291.6 224 72.3
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 1.1e-63 247.3 223 62.8
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 2.6e-62 242.7 230 60.0
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 7.6e-62 241.1 192 68.2
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 1.0e-61 240.7 226 63.7
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 5.0e-61 238.4 197 64.0
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 6.5e-61 238.0 224 61.2
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 8.4e-61 237.7 210 60.0
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 1.4e-60 236.9 201 65.7
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 1.9e-60 236.5 204 64.7
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.9e-60 236.5 209 64.6
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 4.2e-60 235.3 206 64.1
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 4.2e-60 235.3 194 66.5
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 5.5e-60 235.0 218 61.9
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 9.3e-60 234.2 221 62.9
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 2.1e-59 233.0 195 67.2
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 2.7e-59 232.6 187 69.0
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 2.7e-59 232.6 236 56.8
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 2.7e-59 232.6 234 56.4
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 3.5e-59 232.3 197 62.4
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 3.5e-59 232.3 207 61.8
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 3.5e-59 232.3 236 58.1
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 2.3e-58 229.6 199 62.3
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 3.9e-58 228.8 192 65.6
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 5.1e-58 228.4 187 67.4
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 5.1e-58 228.4 230 57.4
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 6.7e-58 228.0 197 65.5
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.1e-57 227.3 206 61.7
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.1e-57 227.3 195 62.6
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 1.1e-57 227.3 197 63.5
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 1.5e-57 226.9 203 61.1
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 2.5e-57 226.1 233 57.1
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 3.3e-57 225.7 219 60.3
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 3.3e-57 225.7 219 60.7
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 3.3e-57 225.7 206 62.1
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 4.3e-57 225.3 195 64.6
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 4.3e-57 225.3 210 59.5
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 5.7e-57 224.9 220 62.7
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 5.7e-57 224.9 215 60.9
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 7.4e-57 224.6 212 59.9
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 9.7e-57 224.2 172 69.8
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 9.7e-57 224.2 266 51.9
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.3e-56 223.8 219 60.7
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 2.2e-56 223.0 236 55.9
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 2.8e-56 222.6 210 59.5
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 3.7e-56 222.2 230 56.5
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 6.3e-56 221.5 231 56.3
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.4e-55 220.3 212 59.4
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.8e-55 219.9 196 62.2
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 1.8e-55 219.9 196 62.2
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 2.4e-55 219.5 194 61.9
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 2.4e-55 219.5 218 57.8
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 5.3e-55 218.4 208 58.7
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.2e-54 217.2 208 61.1
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.2e-54 217.2 224 57.1
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 1.5e-54 216.9 208 61.1
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.5e-54 216.9 247 53.8
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.0e-54 216.5 207 59.4
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 2.0e-54 216.5 228 56.1
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 2.6e-54 216.1 212 60.8
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 2.6e-54 216.1 196 59.7
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 3.4e-54 215.7 189 63.5
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.0e-53 214.2 189 64.6
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 2.2e-53 213.0 207 61.8
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 2.9e-53 212.6 187 63.1
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 2.9e-53 212.6 226 57.1
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 3.8e-53 212.2 199 59.8
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 3.8e-53 212.2 226 56.6
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 3.8e-53 212.2 188 63.8
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 1.9e-52 209.9 212 58.5
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.9e-52 209.9 201 61.2
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 2.5e-52 209.5 203 60.1
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 2.5e-52 209.5 203 58.6
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 5.5e-52 208.4 194 59.3
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 9.4e-52 207.6 199 60.3
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.6e-51 206.8 204 60.3
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 2.1e-51 206.5 208 58.7
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 2.1e-51 206.5 217 58.1
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 2.1e-51 206.5 175 64.6
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 3.6e-51 205.7 204 59.8
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 3.6e-51 205.7 205 58.5
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 4.6e-51 205.3 204 59.8
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 1.4e-50 203.8 174 63.8
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 8.8e-50 201.1 221 52.0
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 1.1e-49 200.7 189 59.8
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 3.3e-49 199.1 205 56.6
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 7.4e-49 198.0 148 70.3
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 9.7e-49 197.6 200 57.0
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 9.7e-49 197.6 200 57.5
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 2.2e-48 196.4 200 57.0
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.2e-48 196.4 200 57.0
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.3e-48 194.9 174 62.6
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 5.3e-47 191.8 194 57.2
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 2.6e-46 189.5 180 61.1
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 5.9e-46 188.3 185 58.4
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 1.7e-45 186.8 198 55.1
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 1.7e-45 186.8 177 58.2
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 1.1e-44 184.1 134 70.1
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 5.5e-44 181.8 176 58.0
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.7e-40 170.2 168 54.8
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 3.7e-40 169.1 183 55.7
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 4.1e-39 165.6 174 56.3
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 3.5e-38 162.5 173 56.1
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 5.5e-36 155.2 137 61.3
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 8.8e-34 147.9 173 49.7
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 1.1e-33 147.5 140 59.3
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 7.5e-33 144.8 155 57.4
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.1e-31 139.4 172 48.8
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 5.3e-31 138.7 160 55.0
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 5.9e-30 135.2 128 57.8
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 5.0e-29 132.1 128 56.2
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 5.0e-29 132.1 175 46.9
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.4e-26 124.0 187 43.3
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.0e-25 120.2 190 39.5
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 7.7e-22 108.2 104 51.0
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.6e-19 100.5 74 68.9
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.4e-18 97.4 106 50.9
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 9.8e-17 91.3 105 48.6
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.6e-11 72.8 91 48.4
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 2.3e-10 70.1 84 54.8
Cre06.g256250 Chlamydomonas reinhardtii HOM05D006257 ORTHO05D007708 2.9e-08 63.2 156 30.8
PRCOL_00001366 Prasinoderma coloniale HOM05D006257 ORTHO05D007708 5.9e-06 55.5 159 31.4


User provided reference genes

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