Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 1.6e-100 369.4 182 100.0
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 3.2e-32 142.5 75 92.0
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 5.4e-32 141.7 75 92.0
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 5.4e-32 141.7 75 92.0
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 9.2e-32 141.0 75 92.0
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 9.2e-32 141.0 75 90.7
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 9.2e-32 141.0 75 90.7
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.1e-29 134.0 75 88.0
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 9.6e-29 131.0 77 84.4
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 2.8e-28 129.4 75 84.0
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 5.2e-27 125.2 75 81.3
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 8.9e-27 124.4 75 80.0
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 2.6e-26 122.9 75 74.7
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 3.4e-26 122.5 75 77.3
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 3.4e-26 122.5 75 74.7
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 3.4e-26 122.5 75 74.7
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 3.4e-26 122.5 75 76.0
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 4.4e-26 122.1 74 78.4
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 7.6e-26 121.3 75 76.0
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 9.9e-26 120.9 75 76.0
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 9.9e-26 120.9 75 76.0
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 9.9e-26 120.9 75 76.0
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 9.9e-26 120.9 75 76.0
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 1.3e-25 120.6 75 76.0
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 2.2e-25 119.8 75 72.0
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 2.2e-25 119.8 75 74.7
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 2.9e-25 119.4 75 74.7
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 2.9e-25 119.4 75 74.7
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 1.1e-24 117.5 75 74.7
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 1.4e-24 117.1 75 72.0
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 1.9e-24 116.7 76 71.1
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 2.4e-24 116.3 75 70.7
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 3.2e-24 115.9 75 70.7
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 3.2e-24 115.9 75 69.3
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 3.2e-24 115.9 75 72.0
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.2e-24 115.5 97 63.9
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 5.4e-24 115.2 75 69.3
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 7.1e-24 114.8 75 70.7
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 9.3e-24 114.4 75 72.0
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 9.3e-24 114.4 75 69.3
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 1.2e-23 114.0 75 69.3
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 1.2e-23 114.0 75 69.3
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 1.6e-23 113.6 75 69.3
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 2.1e-23 113.2 75 70.7
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 2.7e-23 112.8 76 67.1
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 3.5e-23 112.5 75 69.3
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 3.5e-23 112.5 75 69.3
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 3.5e-23 112.5 75 69.3
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 4.6e-23 112.1 75 68.0
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 7.8e-23 111.3 75 68.0
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 1.0e-22 110.9 75 70.7
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 1.3e-22 110.5 75 68.0
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 1.3e-22 110.5 66 74.2
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 1.3e-22 110.5 66 74.2
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 1.3e-22 110.5 75 68.0
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 1.7e-22 110.2 75 68.0
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 1.7e-22 110.2 75 62.7
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 3.9e-22 109.0 75 72.0
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 3.9e-22 109.0 71 69.0
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 3.9e-22 109.0 75 66.7
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 5.1e-22 108.6 75 65.3
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 5.1e-22 108.6 75 66.7
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 5.1e-22 108.6 75 70.7
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 6.6e-22 108.2 75 66.7
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 8.7e-22 107.8 74 66.2
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 8.7e-22 107.8 75 64.0
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 1.1e-21 107.5 75 65.3
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 1.1e-21 107.5 75 70.7
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 1.5e-21 107.1 67 70.1
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 1.5e-21 107.1 75 65.3
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 1.5e-21 107.1 73 69.9
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 1.9e-21 106.7 75 65.3
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 1.9e-21 106.7 75 66.7
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 1.9e-21 106.7 63 74.6
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 2.5e-21 106.3 75 65.3
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 4.3e-21 105.5 75 65.3
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 4.3e-21 105.5 75 65.3
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 5.6e-21 105.1 75 62.7
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 9.6e-21 104.4 75 66.7
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 1.3e-20 104.0 75 62.7
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 1.3e-20 104.0 75 65.3
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 1.6e-20 103.6 74 62.2
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 1.6e-20 103.6 75 62.7
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 2.1e-20 103.2 67 67.2
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 2.8e-20 102.8 75 62.7
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 2.8e-20 102.8 74 63.5
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 2.8e-20 102.8 86 60.5
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 3.6e-20 102.4 70 62.9
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 3.6e-20 102.4 75 62.7
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 3.6e-20 102.4 58 75.9
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 4.8e-20 102.1 75 62.7
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 8.1e-20 101.3 75 61.3
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 8.1e-20 101.3 75 61.3
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 1.1e-19 100.9 75 62.7
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 3.1e-19 99.4 75 58.7
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 4.0e-19 99.0 73 58.9
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 4.0e-19 99.0 73 58.9
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 4.0e-19 99.0 73 58.9
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 4.0e-19 99.0 66 65.2
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 6.9e-19 98.2 63 65.1
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 6.9e-19 98.2 75 60.0
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 6.9e-19 98.2 75 60.0
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 9.0e-19 97.8 75 60.0
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.2e-18 97.4 75 60.0
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 2.0e-18 96.7 75 56.0
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.0e-18 96.7 75 58.7
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 3.4e-18 95.9 75 58.7
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 5.8e-18 95.1 61 63.9
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.7e-17 93.6 54 72.2
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 1.7e-17 93.6 61 63.9
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 2.9e-17 92.8 61 65.6
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.9e-17 92.8 48 81.2
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 1.9e-16 90.1 67 58.2
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 9.3e-16 87.8 68 54.4
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 1.2e-15 87.4 61 59.0
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 2.7e-15 86.3 48 77.1
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 3.5e-15 85.9 75 50.7
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 6.7e-14 81.6 61 60.7
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 1.1e-13 80.9 67 56.7
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.1e-12 76.6 38 92.1
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 6.2e-12 75.1 41 82.9
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.2e-10 70.9 70 48.6
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 4.5e-10 68.9 61 59.0
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 7.6e-10 68.2 61 50.8
CAN.G1989.6 Capsicum annuum HOM05D000261 ORTHO05D001168 1.3e-09 67.4 39 79.5
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 2.9e-09 66.2 68 45.6
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 2.9e-09 66.2 47 57.4
CAN.G492.40 Capsicum annuum HOM05D002921 ORTHO05D003258 1.9e-08 63.5 72 52.8
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 2.4e-08 63.2 42 71.4
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 1.6e-07 60.5 32 78.1


User provided reference genes

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