Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G548.23 Capsicum annuum HOM05D006002 ORTHO05D007651 9.7e-49 196.4 95 100.0
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 9.8e-17 90.1 119 47.9
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 4.8e-16 87.8 119 46.2
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 4.8e-16 87.8 119 46.2
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 2.4e-15 85.5 119 44.5
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 7.0e-15 84.0 112 45.5
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 4.5e-14 81.3 119 43.7
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.3e-13 79.7 120 41.7
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 6.5e-13 77.4 133 39.1
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 1.9e-12 75.9 137 40.1
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 3.2e-12 75.1 119 41.2
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 9.5e-12 73.6 119 38.7
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 2.8e-11 72.0 119 38.7
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 6.1e-11 70.9 134 34.3
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 6.1e-11 70.9 132 36.4
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 6.1e-11 70.9 132 36.4
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 8.0e-11 70.5 132 34.8
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 1.0e-10 70.1 119 37.8
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 3.0e-10 68.6 119 37.8
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 4.0e-10 68.2 119 37.0
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 6.8e-10 67.4 119 36.1
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 6.8e-10 67.4 120 38.3
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 1.2e-09 66.6 134 35.8
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 1.2e-09 66.6 136 35.3
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 1.2e-09 66.6 135 34.8
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 1.2e-09 66.6 119 35.3
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 1.5e-09 66.2 119 36.1
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 1.5e-09 66.2 139 36.7
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 2.0e-09 65.9 109 37.6
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 2.0e-09 65.9 119 36.1
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 2.0e-09 65.9 118 33.1
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 2.0e-09 65.9 133 32.3
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 2.6e-09 65.5 133 34.6
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 2.6e-09 65.5 132 34.8
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 3.4e-09 65.1 127 34.6
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 3.4e-09 65.1 120 35.0
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 3.4e-09 65.1 118 33.1
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 3.4e-09 65.1 133 33.1
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 4.4e-09 64.7 128 36.7
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 4.4e-09 64.7 135 33.3
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 4.4e-09 64.7 119 35.3
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 5.7e-09 64.3 135 33.3
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 5.7e-09 64.3 135 33.3
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 5.7e-09 64.3 119 35.3
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 5.7e-09 64.3 134 36.6
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 9.8e-09 63.5 65 46.2
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.3e-08 63.2 119 35.3
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 1.7e-08 62.8 121 38.0
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 1.7e-08 62.8 132 33.3
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 1.7e-08 62.8 119 32.8
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 2.2e-08 62.4 132 33.3
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 2.2e-08 62.4 132 33.3
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 2.2e-08 62.4 119 34.5
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 2.8e-08 62.0 119 31.9
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 2.8e-08 62.0 117 35.0
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 4.9e-08 61.2 133 33.1
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 4.9e-08 61.2 78 43.6
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 6.3e-08 60.8 120 36.7
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 6.3e-08 60.8 133 33.1
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 8.3e-08 60.5 65 47.7
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 8.3e-08 60.5 65 47.7
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 8.3e-08 60.5 65 47.7
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 8.3e-08 60.5 119 34.5
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 1.1e-07 60.1 119 33.6
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.1e-07 60.1 68 48.5
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 1.1e-07 60.1 124 32.3
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 1.4e-07 59.7 119 32.8
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.4e-07 59.7 119 32.8
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 1.4e-07 59.7 119 34.5
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 1.4e-07 59.7 119 33.6
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 1.8e-07 59.3 130 33.8
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 2.4e-07 58.9 54 53.7
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 3.1e-07 58.5 65 44.6
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 4.1e-07 58.2 65 44.6
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 5.4e-07 57.8 110 35.5
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 9.2e-07 57.0 65 44.6
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 9.2e-07 57.0 119 32.8
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 9.2e-07 57.0 35 68.6
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 1.2e-06 56.6 132 31.1
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 1.6e-06 56.2 119 33.6
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 1.6e-06 56.2 51 56.9
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 2.0e-06 55.8 119 32.8
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 2.0e-06 55.8 119 31.9
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 2.0e-06 55.8 118 31.4
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 2.7e-06 55.5 119 31.9
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 2.7e-06 55.5 119 31.9
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 2.7e-06 55.5 119 31.9
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 2.7e-06 55.5 35 68.6
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 2.7e-06 55.5 70 40.0
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 2.7e-06 55.5 86 40.7
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 3.5e-06 55.1 119 31.9
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 3.5e-06 55.1 119 31.9
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 3.5e-06 55.1 119 31.9
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 4.5e-06 54.7 37 62.2
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 4.5e-06 54.7 35 68.6
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 4.5e-06 54.7 40 55.0
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 5.9e-06 54.3 119 31.9
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 5.9e-06 54.3 117 33.3
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 7.8e-06 53.9 117 33.3
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 7.8e-06 53.9 91 39.6
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 7.8e-06 53.9 119 31.1


User provided reference genes

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