Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 1.0e-134 483.4 244 100.0
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 3.5e-119 431.8 244 86.9
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 7.8e-119 430.6 244 87.7
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 1.5e-117 426.4 244 86.9
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 7.3e-117 424.1 244 87.3
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 1.7e-110 402.9 244 82.8
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 9.4e-80 300.8 247 61.9
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 4.3e-77 292.0 250 59.2
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 5.7e-77 291.6 247 60.7
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 1.7e-76 290.0 249 59.4
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 6.9e-75 284.6 246 58.5
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 6.9e-75 284.6 253 58.9
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 1.2e-74 283.9 257 56.8
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.2e-74 283.9 250 58.4
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 2.0e-74 283.1 244 60.7
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 2.0e-74 283.1 254 59.4
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 4.5e-74 282.0 243 58.0
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 3.8e-73 278.9 247 58.3
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 2.5e-72 276.2 197 68.0
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 4.2e-72 275.4 261 55.9
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 5.5e-72 275.0 249 55.4
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 5.5e-72 275.0 228 62.3
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 9.4e-72 274.2 249 57.4
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 2.1e-71 273.1 222 59.9
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.7e-71 272.7 246 57.3
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.4e-70 270.4 251 56.6
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 1.8e-70 270.0 246 56.9
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 1.8e-70 270.0 244 57.0
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.3e-70 269.6 216 62.0
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 3.0e-70 269.2 247 57.5
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 3.9e-70 268.9 233 57.5
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 3.9e-70 268.9 151 88.1
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 1.1e-69 267.3 251 55.8
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 1.1e-69 267.3 244 56.6
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 1.5e-69 266.9 253 54.9
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 1.5e-69 266.9 200 64.5
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 1.5e-69 266.9 251 56.2
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 2.0e-69 266.5 205 64.4
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 2.6e-69 266.2 222 60.4
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 2.6e-69 266.2 256 55.1
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 3.3e-69 265.8 246 55.7
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.4e-69 265.4 246 56.1
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 4.4e-69 265.4 246 56.1
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 5.7e-69 265.0 258 54.3
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 2.2e-68 263.1 214 60.3
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 2.2e-68 263.1 239 56.9
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 2.8e-68 262.7 212 59.4
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 4.8e-68 261.9 245 55.9
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.8e-68 261.9 216 60.6
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 6.3e-68 261.5 244 54.9
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 8.2e-68 261.2 243 54.7
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 8.2e-68 261.2 202 62.4
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 1.1e-67 260.8 211 61.1
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 1.4e-67 260.4 221 58.8
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 2.4e-67 259.6 208 59.1
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.1e-67 258.8 246 55.7
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 5.3e-67 258.5 244 54.9
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 7.0e-67 258.1 186 65.6
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 1.2e-66 257.3 246 53.7
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 1.5e-66 256.9 211 60.7
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 1.5e-66 256.9 216 60.2
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 1.3e-65 253.8 189 64.0
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 2.2e-65 253.1 246 54.5
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 3.8e-65 252.3 199 60.8
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.4e-64 250.4 250 54.8
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 1.4e-64 250.4 206 59.7
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 1.4e-64 250.4 232 56.0
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 1.9e-64 250.0 248 53.6
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 3.2e-64 249.2 172 69.2
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 4.2e-64 248.8 197 59.4
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 7.2e-64 248.1 188 62.2
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 9.4e-64 247.7 237 55.3
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 1.2e-63 247.3 204 61.3
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 4.7e-63 245.4 181 66.3
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 3.0e-62 242.7 203 56.7
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.5e-61 240.4 242 53.3
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 3.3e-61 239.2 204 53.9
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 5.3e-59 231.9 237 49.8
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 2.0e-58 229.9 246 50.4
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 5.9e-58 228.4 235 50.6
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 1.3e-57 227.3 221 53.8
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 2.2e-57 226.5 241 49.8
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 2.2e-57 226.5 241 49.8
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 2.9e-57 226.1 221 54.8
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 6.5e-57 224.9 241 49.8
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 6.5e-57 224.9 241 49.4
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 6.5e-57 224.9 213 55.4
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 1.1e-56 224.2 221 53.8
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 1.5e-56 223.8 236 49.6
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 9.4e-56 221.1 221 51.1
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 1.4e-54 217.2 217 53.0
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 1.8e-54 216.9 177 56.5
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 2.6e-53 213.0 142 67.6
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 3.3e-53 212.6 184 56.5
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 3.1e-51 206.1 144 66.7
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 4.1e-51 205.7 174 55.2
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 9.1e-51 204.5 196 46.4
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.9e-48 196.8 180 51.7
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 4.7e-47 192.2 160 59.4
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 6.1e-47 191.8 177 52.5
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 1.5e-45 187.2 185 51.9
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 2.0e-45 186.8 181 50.8
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.4e-43 180.6 209 45.5
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 7.0e-43 178.3 251 43.4
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 3.5e-42 176.0 219 40.6
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 2.5e-40 169.9 221 42.1
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 3.3e-32 142.9 87 77.0
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 2.1e-31 140.2 170 47.6
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 2.0e-29 133.7 213 36.6
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 4.4e-29 132.5 223 38.6
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 3.7e-28 129.4 145 49.0
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 2.9e-20 103.2 83 57.8
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 1.0e-17 94.7 159 40.9
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 1.1e-16 91.3 67 61.2
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 4.3e-16 89.4 198 32.8
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 2.8e-15 86.7 94 41.5
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 5.4e-11 72.4 73 49.3
Cre10.g463800 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 3.5e-10 69.7 214 28.0
HPP92_026872 Vanilla planifolia HOM05D007174 ORTHO05D009061 7.3e-08 62.0 73 39.7
Oeu004139.1 Olea europaea HOM05D007174 ORTHO05D009061 3.1e-06 56.6 87 37.9


User provided reference genes

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