Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G546.54 Capsicum annuum HOM05D007274 ORTHO05D009194 1.2e-33 146.0 73 100.0
Nitab4.5_0000173g0170 Nicotiana tabacum HOM05D007274 ORTHO05D009194 8.3e-32 139.8 73 94.5
Solyc11g066450.2 Solanum lycopersicum HOM05D007274 ORTHO05D009194 3.1e-31 137.9 73 93.2
Sopen11g026200 Solanum pennellii HOM05D007274 ORTHO05D009194 3.1e-31 137.9 73 93.2
PGSC0003DMG401000458 Solanum tuberosum HOM05D007274 ORTHO05D009194 3.1e-31 137.9 73 93.2
Peaxi162Scf00983g00003 Petunia axillaris HOM05D007274 ORTHO05D009194 1.6e-30 135.6 72 88.9
Nitab4.5_0009628g0020 Nicotiana tabacum HOM05D007274 ORTHO05D009194 3.5e-30 134.4 73 90.4
Oeu007727.1 Olea europaea HOM05D007274 ORTHO05D009194 5.9e-30 133.7 73 91.8
Actinidia07190 Actinidia chinensis HOM05D007274 ORTHO05D009194 2.2e-29 131.7 73 89.0
vmacro03251 Vaccinium macrocarpon HOM05D007274 ORTHO05D009194 6.5e-29 130.2 73 86.3
Hund00829 Selenicereus undatus HOM05D007274 ORTHO05D009194 3.2e-28 127.9 73 87.7
Cc01_g10210 Coffea canephora HOM05D007274 ORTHO05D009194 4.2e-28 127.5 73 84.9
Rhsim13G0101200 Rhododendron simsii HOM05D007274 ORTHO05D009194 4.2e-28 127.5 73 82.2
CSS0045495 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 9.4e-28 126.3 73 84.9
CSS0014818 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 1.2e-27 125.9 73 84.9
Manes.04G012400 Manihot esculenta HOM05D007274 ORTHO05D009194 3.6e-27 124.4 73 87.7
Rhsim13G0101500 Rhododendron simsii HOM05D007274 ORTHO05D009194 4.7e-27 124.0 73 80.8
Ciclev10029644m.g Citrus clementina HOM05D007274 ORTHO05D009194 8.0e-27 123.2 73 86.3
Lsat_1_v5_gn_1_64881 Lactuca sativa HOM05D007274 ORTHO05D009194 1.0e-26 122.9 73 79.5
AUR62024013 Chenopodium quinoa HOM05D007274 ORTHO05D009194 3.0e-26 121.3 73 82.2
DCAR_022681 Daucus carota HOM05D007274 ORTHO05D009194 4.0e-26 120.9 73 80.8
Sc06g0006140 Simmondsia chinensis HOM05D007274 ORTHO05D009194 4.0e-26 120.9 73 84.9
CSS0039770 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 6.8e-26 120.2 73 79.5
AUR62041328 Chenopodium quinoa HOM05D007274 ORTHO05D009194 1.2e-25 119.4 73 80.8
HanXRQChr11g0346021 Helianthus annuus HOM05D007274 ORTHO05D009194 1.2e-25 119.4 73 78.1
SGA_v2.0_scaffold277G46704 Striga asiatica HOM05D007274 ORTHO05D009194 2.0e-25 118.6 73 82.2
Ah.01g004810 Amaranthus hybridus HOM05D007274 ORTHO05D009194 2.6e-25 118.2 73 80.8
ECA248G0925 Erigeron canadensis HOM05D007274 ORTHO05D009194 3.4e-25 117.9 73 76.7
PGR102G1958 Punica granatum HOM05D007274 ORTHO05D009194 4.4e-25 117.5 73 80.8
SalBow6G3121 Salvia bowleyana HOM05D007274 ORTHO05D009194 7.5e-25 116.7 73 80.8
Migut.D02299 Erythranthe guttata HOM05D007274 ORTHO05D009194 1.7e-24 115.5 73 76.7
Cfa010139 Carpinus fangiana HOM05D007274 ORTHO05D009194 2.2e-24 115.2 73 80.8
Thecc.09G297800 Theobroma cacao HOM05D007274 ORTHO05D009194 2.2e-24 115.2 73 76.7
CSS0018211 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 2.8e-24 114.8 73 79.5
Sed0003405 Sechium edule HOM05D007274 ORTHO05D009194 4.9e-24 114.0 73 75.3
EL10Ac9g21016 Beta vulgaris HOM05D007274 ORTHO05D009194 6.3e-24 113.6 71 77.5
ClCG02G021670 Citrullus lanatus HOM05D007274 ORTHO05D009194 8.3e-24 113.2 73 75.3
PSO384G1249 Papaver somniferum HOM05D007274 ORTHO05D009194 8.3e-24 113.2 74 74.3
Cpa.g.sc47.5 Carica papaya HOM05D007274 ORTHO05D009194 1.1e-23 112.8 73 78.1
Haze_23527 Corylus avellana HOM05D007274 ORTHO05D009194 1.4e-23 112.5 73 78.1
CANSAT64G0704 Cannabis sativa HOM05D007274 ORTHO05D009194 1.8e-23 112.1 72 76.4
MBI04_g08417_MAGBIO Magnolia biondii HOM05D007274 ORTHO05D009194 1.8e-23 112.1 71 74.6
A10p18160 Brassica napus HOM05D007274 ORTHO05D009194 2.4e-23 111.7 73 75.3
BraA10t43891Z Brassica rapa HOM05D007274 ORTHO05D009194 2.4e-23 111.7 73 75.3
MD03G1128500 Malus domestica HOM05D007274 ORTHO05D009194 2.4e-23 111.7 73 76.7
QL01p014890 Quercus lobata HOM05D007274 ORTHO05D009194 2.4e-23 111.7 71 80.3
RcHm_v2.0_Chr5g0056551 Rosa chinensis HOM05D007274 ORTHO05D009194 2.4e-23 111.7 73 76.7
Carub.0006s2065 Capsella rubella HOM05D007274 ORTHO05D009194 3.1e-23 111.3 73 75.3
CiPaw.14G106900 Carya illinoinensis HOM05D007274 ORTHO05D009194 3.1e-23 111.3 73 79.5
FAN21G0952 Fragaria x ananassa HOM05D007274 ORTHO05D009194 4.1e-23 110.9 73 75.3
Gohir.A09G064000 Gossypium hirsutum HOM05D007274 ORTHO05D009194 4.1e-23 110.9 73 75.3
Gohir.D09G062900 Gossypium hirsutum HOM05D007274 ORTHO05D009194 4.1e-23 110.9 73 75.3
Gorai.006G077700 Gossypium raimondii HOM05D007274 ORTHO05D009194 4.1e-23 110.9 73 75.3
Potri.004G217300 Populus trichocarpa HOM05D007274 ORTHO05D009194 4.1e-23 110.9 73 79.5
THA.LOC109116051 Tarenaya hassleriana HOM05D007274 ORTHO05D009194 4.1e-23 110.9 73 75.3
FAN16G2799 Fragaria x ananassa HOM05D007274 ORTHO05D009194 7.0e-23 110.2 72 73.6
FvH4_3g30550 Fragaria vesca HOM05D007274 ORTHO05D009194 9.1e-23 109.8 73 74.0
FAN11G1565 Fragaria x ananassa HOM05D007274 ORTHO05D009194 9.1e-23 109.8 73 74.0
Sabra04G0148000 Salix brachista HOM05D007274 ORTHO05D009194 9.1e-23 109.8 73 78.1
BcaB05g22677 Brassica carinata HOM05D007274 ORTHO05D009194 1.2e-22 109.4 73 74.0
BcaB08g36400 Brassica carinata HOM05D007274 ORTHO05D009194 1.2e-22 109.4 73 74.0
BcaC04g19606 Brassica carinata HOM05D007274 ORTHO05D009194 1.2e-22 109.4 73 74.0
C09p53770 Brassica napus HOM05D007274 ORTHO05D009194 1.2e-22 109.4 73 74.0
BolC9t58252H Brassica oleracea HOM05D007274 ORTHO05D009194 1.2e-22 109.4 73 74.0
CARHR190660 Cardamine hirsuta HOM05D007274 ORTHO05D009194 1.2e-22 109.4 73 74.0
Thhalv10015213m.g Eutrema salsugineum HOM05D007274 ORTHO05D009194 1.2e-22 109.4 73 74.0
Prupe.6G113700 Prunus persica HOM05D007274 ORTHO05D009194 1.2e-22 109.4 73 76.7
Sp6g22530 Schrenkiella parvula HOM05D007274 ORTHO05D009194 1.2e-22 109.4 73 74.0
unitig_899.g15364 Utricularia gibba HOM05D000376 ORTHO05D000237 1.2e-22 109.4 67 80.6
AL6G34010 Arabidopsis lyrata HOM05D007274 ORTHO05D009194 3.5e-22 107.8 73 72.6
AT5G22875 Arabidopsis thaliana HOM05D007274 ORTHO05D009194 3.5e-22 107.8 73 71.2
COL.COLO4_19207 Corchorus olitorius HOM05D007274 ORTHO05D009194 3.5e-22 107.8 73 75.3
Medtr4g057190 Medicago truncatula HOM05D007274 ORTHO05D009194 3.5e-22 107.8 72 72.2
Atru.chr3.3502 Acer truncatum HOM05D007274 ORTHO05D009194 5.9e-22 107.1 67 79.1
Ca_10763_v3 Cicer arietinum L. HOM05D007274 ORTHO05D009194 5.9e-22 107.1 73 72.6
Duzib150G1296 Durio zibethinus HOM05D007274 ORTHO05D009194 7.7e-22 106.7 73 72.6
Duzib150G1526 Durio zibethinus HOM05D007274 ORTHO05D009194 7.7e-22 106.7 73 72.6
arahy.Tifrunner.gnm1.ann1.BZT54Z Arachis hypogaea HOM05D007274 ORTHO05D009194 1.0e-21 106.3 73 74.0
arahy.Tifrunner.gnm1.ann1.F7FWRZ Arachis hypogaea HOM05D007274 ORTHO05D009194 1.0e-21 106.3 73 74.0
Os04g0165500 Oryza sativa ssp. japonica HOM05D007274 ORTHO05D009194 1.3e-21 105.9 73 69.9
Aa31LG1G12850 Aethionema arabicum HOM05D007274 ORTHO05D009194 2.3e-21 105.1 73 69.9
Haze_08394 Corylus avellana HOM05D007274 ORTHO05D009194 2.9e-21 104.8 82 65.9
Haze_23532 Corylus avellana HOM05D007274 ORTHO05D009194 2.9e-21 104.8 73 75.3
Psat7g223680 Pisum sativum HOM05D007274 ORTHO05D009194 3.8e-21 104.4 73 68.5
TPR.G36741 Trifolium pratense HOM05D007274 ORTHO05D009194 5.0e-21 104.0 73 69.9
Lj3g0015703 Lotus japonicus HOM05D007274 ORTHO05D009194 6.6e-21 103.6 73 69.9
Lalb_Chr19g0136881 Lupinus albus HOM05D007274 ORTHO05D009194 6.6e-21 103.6 73 72.6
Nn2g13873 Nelumbo nucifera HOM05D007274 ORTHO05D009194 8.6e-21 103.2 71 70.4
HPP92_002407 Vanilla planifolia HOM05D007274 ORTHO05D009194 1.1e-20 102.8 73 69.9
GSVIVG01031456001 Vitis vinifera HOM05D007274 ORTHO05D009194 1.1e-20 102.8 73 68.5
Aqoxy1G01060 Aquilegia oxysepala HOM05D007274 ORTHO05D009194 9.5e-20 99.8 71 69.0
Nn5g27554 Nelumbo nucifera HOM05D007274 ORTHO05D009194 2.8e-19 98.2 71 67.6
BNapus_Darmor_BZH_scaffold_38p00270 Brassica napus HOM05D007274 ORTHO05D009194 4.7e-19 97.4 65 73.8
C02p11370 Brassica napus HOM05D007274 ORTHO05D009194 4.7e-19 97.4 65 73.8
CDE04G2982 Ceratophyllum demersum HOM05D007274 ORTHO05D009194 8.0e-19 96.7 65 70.8
ATR0043G009 Amborella trichopoda HOM05D007274 ORTHO05D009194 2.3e-18 95.1 65 72.3
BraA02t05697Z Brassica rapa HOM05D007274 ORTHO05D009194 4.0e-18 94.4 65 72.3
Glyma.12G082200 Glycine max HOM05D007274 ORTHO05D009194 8.9e-18 93.2 65 70.8
Phvul.005G069100 Phaseolus vulgaris HOM05D007274 ORTHO05D009194 1.5e-17 92.4 65 70.8
Phvul.011G086800 Phaseolus vulgaris HOM05D007274 ORTHO05D009194 1.5e-17 92.4 65 70.8
Glyma.11G192200 Glycine max HOM05D007274 ORTHO05D009194 4.4e-17 90.9 64 73.4
SEGI_23633 Sequoiadendron giganteum HOM05D007274 ORTHO05D009194 2.2e-16 88.6 65 69.2
Mapoly0009s0144 Marchantia polymorpha HOM05D007274 ORTHO05D009194 1.6e-14 82.4 61 65.6
Lsat_1_v5_gn_1_64921 Lactuca sativa HOM05D007274 ORTHO05D009194 5.0e-13 77.4 66 63.6
Pp3c6_6370 Physcomitrium patens HOM05D007274 ORTHO05D009194 1.1e-12 76.3 61 62.3
TAR369G0919 Trochodendron aralioides HOM05D007274 ORTHO05D009194 2.5e-12 75.1 49 73.5
MD11G1149300 Malus domestica HOM05D007274 ORTHO05D009194 9.5e-12 73.2 53 71.7
SHI06197 Sapria himalayana HOM05D005377 ORTHO05D003034 2.2e-08 62.0 59 55.9


User provided reference genes

Program Settings