Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G546.45 Capsicum annuum HOM05D024775 ORTHO05D028437 1.4e-209 732.6 347 100.0
CAN.G3487.1 Capsicum annuum HOM05D024775 ORTHO05D028437 1.8e-201 705.7 335 99.7
Nitab4.5_0000173g0020 Nicotiana tabacum HOM05D024775 ORTHO05D028437 3.8e-119 432.2 364 58.8
CAN.G546.47 Capsicum annuum HOM05D024775 ORTHO05D028437 1.4e-105 387.1 184 99.5
Nitab4.5_0000173g0090 Nicotiana tabacum HOM05D024775 ORTHO05D000074 3.1e-36 156.8 181 49.2
TAR371G0808 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.1e-20 105.1 355 29.6
PGSC0003DMG400014336 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.6e-19 100.5 299 27.1
PGSC0003DMG400009902 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.7e-19 99.0 353 28.9
Actinidia28355 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.0e-18 98.6 361 28.5
Atru.chr9.2350 Acer truncatum HOM05D000151 ORTHO05D000074 3.8e-18 96.7 373 27.3
Peaxi162Scf00089g00166 Petunia axillaris HOM05D000151 ORTHO05D000074 3.8e-18 96.7 297 26.9
Peaxi162Scf00089g00158 Petunia axillaris HOM05D000151 ORTHO05D000074 6.5e-18 95.9 294 26.5
Cc08_g14740 Coffea canephora HOM05D000151 ORTHO05D000074 8.5e-18 95.5 354 26.3
Peaxi162Scf00074g00732 Petunia axillaris HOM05D000151 ORTHO05D000074 1.4e-17 94.7 358 26.5
Peaxi162Scf00714g00059 Petunia axillaris HOM05D000151 ORTHO05D000074 2.5e-17 94.0 350 26.0
CAN.G1804.2 Capsicum annuum HOM05D000151 ORTHO05D000074 3.2e-17 93.6 276 29.0
PGSC0003DMG400043347 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.2e-17 93.2 348 24.1
PGSC0003DMG402028917 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.2e-17 93.2 348 24.1
Sopen03g034420 Solanum pennellii HOM05D000151 ORTHO05D000074 9.4e-17 92.0 369 25.7
Nitab4.5_0001095g0040 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.2e-16 91.7 354 26.0
Sopen04g035970 Solanum pennellii HOM05D000151 ORTHO05D000074 1.2e-16 91.7 349 27.2
PGSC0003DMG400023604 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.2e-16 91.7 279 27.2
Nitab4.5_0003015g0050 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.6e-16 91.3 359 29.0
Peaxi162Scf00280g00034 Petunia axillaris HOM05D000151 ORTHO05D000074 1.6e-16 91.3 351 26.5
PGSC0003DMG400018105 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.1e-16 90.9 371 27.2
Peaxi162Scf00119g01111 Petunia axillaris HOM05D000151 ORTHO05D000074 2.7e-16 90.5 362 24.9
PGSC0003DMG400040741 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.7e-16 90.5 346 26.0
Nitab4.5_0002346g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 4.7e-16 89.7 293 26.3
Sopen05g006300 Solanum pennellii HOM05D000151 ORTHO05D000074 4.7e-16 89.7 275 26.5
PGSC0003DMG400024650 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.7e-16 89.7 375 23.5
Peaxi162Scf00062g00069 Petunia axillaris HOM05D000151 ORTHO05D000074 6.1e-16 89.4 352 26.4
PGSC0003DMG400018078 Solanum tuberosum HOM05D000151 ORTHO05D000074 6.1e-16 89.4 367 25.6
CAN.G1804.4 Capsicum annuum HOM05D000151 ORTHO05D000074 7.9e-16 89.0 288 25.7
Cc08_g14360 Coffea canephora HOM05D000151 ORTHO05D000074 7.9e-16 89.0 281 27.0
PGSC0003DMG400024651 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.9e-16 89.0 306 25.2
Peaxi162Scf00074g00073 Petunia axillaris HOM05D000151 ORTHO05D000074 1.4e-15 88.2 351 26.8
Solyc03g115420.3 Solanum lycopersicum HOM05D000151 ORTHO05D000074 2.3e-15 87.4 371 24.0
Sopen08g027930 Solanum pennellii HOM05D000151 ORTHO05D000074 2.3e-15 87.4 344 27.3
PGSC0003DMG400018156 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.3e-15 87.4 368 25.0
Sopen06g025910 Solanum pennellii HOM05D000151 ORTHO05D000074 3.0e-15 87.0 351 25.1
Peaxi162Scf00017g00215 Petunia axillaris HOM05D000151 ORTHO05D000074 3.9e-15 86.7 383 25.1
Peaxi162Scf00329g00017 Petunia axillaris HOM05D000151 ORTHO05D000074 3.9e-15 86.7 271 28.8
TAR636G2284 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.9e-15 86.7 359 25.3
TAR636G2694 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.9e-15 86.7 359 25.3
TAR636G3198 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.9e-15 86.7 355 25.6
PGSC0003DMG400012150 Solanum tuberosum HOM05D000151 ORTHO05D000074 5.1e-15 86.3 332 27.1
PGSC0003DMG400012285 Solanum tuberosum HOM05D000151 ORTHO05D000074 5.1e-15 86.3 372 25.5
Nitab4.5_0015521g0010 Nicotiana tabacum HOM05D000151 ORTHO05D000074 6.7e-15 85.9 271 29.2
Peaxi162Scf00074g00438 Petunia axillaris HOM05D000151 ORTHO05D000074 1.1e-14 85.1 367 24.5
Sopen03g031860 Solanum pennellii HOM05D000151 ORTHO05D000074 1.5e-14 84.7 280 27.1
TAR636G1620 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.5e-14 84.7 355 25.4
Peaxi162Scf00760g10023 Petunia axillaris HOM05D000151 ORTHO05D000074 2.0e-14 84.3 363 26.4
TAR626G1895 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.0e-14 84.3 375 25.1
Rhsim02G0249600 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.6e-14 84.0 364 26.1
Nitab4.5_0000742g0080 Nicotiana tabacum HOM05D000151 ORTHO05D000074 3.3e-14 83.6 271 26.9
TAR636G3671 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.3e-14 83.6 373 25.5
Sopen08g030590 Solanum pennellii HOM05D000151 ORTHO05D000074 4.4e-14 83.2 371 25.1
PGSC0003DMG400003926 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.4e-14 83.2 238 26.9
Peaxi162Scf01221g00008 Petunia axillaris HOM05D000151 ORTHO05D000074 7.4e-14 82.4 299 25.4
Sopen03g032220 Solanum pennellii HOM05D000151 ORTHO05D000074 7.4e-14 82.4 348 25.3
Peaxi162Scf00089g01847 Petunia axillaris HOM05D002875 ORTHO05D003215 9.7e-14 82.0 354 24.3
Peaxi162Scf00549g00033 Petunia axillaris HOM05D000151 ORTHO05D000074 9.7e-14 82.0 256 26.6
TAR636G2287 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.7e-14 82.0 353 23.5
Rhsim02G0249500 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.3e-13 81.6 364 25.8
Sopen04g025070 Solanum pennellii HOM05D000151 ORTHO05D000074 1.3e-13 81.6 258 29.5
PGSC0003DMG400018077 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.3e-13 81.6 364 23.9
CAN.G1711.9 Capsicum annuum HOM05D000151 ORTHO05D002065 1.7e-13 81.3 256 27.0
Solyc08g082350.4 Solanum lycopersicum HOM05D000151 ORTHO05D000074 1.7e-13 81.3 307 27.7
TAR636G0604 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.7e-13 81.3 332 27.7
Atru.chr10.13 Acer truncatum HOM05D000151 ORTHO05D000074 2.2e-13 80.9 308 26.0
Nitab4.5_0000789g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.2e-13 80.9 300 24.7
Peaxi162Scf00017g00231 Petunia axillaris HOM05D000151 ORTHO05D000074 2.2e-13 80.9 296 23.6
Peaxi162Scf00078g00539 Petunia axillaris HOM05D000151 ORTHO05D000074 2.2e-13 80.9 272 26.1
PGSC0003DMG400038971 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.2e-13 80.9 298 27.5
PGSC0003DMG400037580 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.8e-13 80.5 315 28.6
Peaxi162Scf00119g00111 Petunia axillaris HOM05D000151 ORTHO05D000074 6.3e-13 79.3 368 24.5
PGSC0003DMG400040430 Solanum tuberosum HOM05D000151 ORTHO05D000074 6.3e-13 79.3 306 25.8
Peaxi162Scf00746g00033 Petunia axillaris HOM05D000151 ORTHO05D000074 8.2e-13 79.0 330 26.7
Nitab4.5_0000798g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.1e-12 78.6 364 24.5
Peaxi162Scf00132g00056 Petunia axillaris HOM05D000151 ORTHO05D000074 1.4e-12 78.2 339 25.4
Solyc03g113160.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 1.4e-12 78.2 262 26.0
TAR636G0534 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.4e-12 78.2 323 25.7
Peaxi162Scf02151g00007 Petunia axillaris HOM05D000151 ORTHO05D000074 4.1e-12 76.6 351 24.2
PGSC0003DMG400001765 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.0e-12 75.9 351 25.1
Manes.07G051600 Manihot esculenta HOM05D000151 ORTHO05D000074 9.1e-12 75.5 302 25.2
Nitab4.5_0001231g0020 Nicotiana tabacum HOM05D000151 ORTHO05D000074 9.1e-12 75.5 238 29.0
Peaxi162Scf00074g00077 Petunia axillaris HOM05D000151 ORTHO05D000074 9.1e-12 75.5 358 26.0
Solyc04g082360.2 Solanum lycopersicum HOM05D000151 ORTHO05D000074 9.1e-12 75.5 262 27.5
PGSC0003DMG400001736 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.1e-12 75.5 357 25.2
Sopen08g030610 Solanum pennellii HOM05D000151 ORTHO05D000074 1.2e-11 75.1 307 26.7
TAR626G1713 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-11 75.1 242 27.7
PGSC0003DMG400001762 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.5e-11 74.7 357 24.6
Solyc08g082510.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 2.0e-11 74.3 353 25.2
PGSC0003DMG400012282 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.0e-11 74.3 310 25.5
Nitab4.5_0000642g0140 Nicotiana tabacum HOM05D000151 ORTHO05D000074 3.5e-11 73.6 197 28.9
Sopen08g030770 Solanum pennellii HOM05D000151 ORTHO05D000074 3.5e-11 73.6 340 25.0
Nitab4.5_0002875g0010 Nicotiana tabacum HOM05D000151 ORTHO05D000074 4.5e-11 73.2 287 27.2
Peaxi162Scf00038g02631 Petunia axillaris HOM05D000151 ORTHO05D000074 5.9e-11 72.8 368 24.7
Solyc04g017610.2 Solanum lycopersicum HOM05D000151 ORTHO05D000074 5.9e-11 72.8 254 28.0
PGSC0003DMG400012148 Solanum tuberosum HOM05D000151 ORTHO05D000074 5.9e-11 72.8 335 23.9
PGSC0003DMG400012149 Solanum tuberosum HOM05D000151 ORTHO05D000074 5.9e-11 72.8 330 23.9
Peaxi162Scf00746g00412 Petunia axillaris HOM05D000151 ORTHO05D000074 7.7e-11 72.4 370 26.2
PGSC0003DMG400041939 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.7e-11 72.4 341 25.2
TAR362G0800 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-10 72.0 346 23.4
Aqoxy7G01778 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.7e-10 71.2 310 25.8
Peaxi162Scf00746g00510 Petunia axillaris HOM05D000151 ORTHO05D000074 1.7e-10 71.2 370 26.2
Nitab4.5_0002367g0120 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.2e-10 70.9 168 32.1
Dinv38983 Davidia involucrata HOM05D000151 ORTHO05D000074 2.9e-10 70.5 230 26.5
Peaxi162Scf00111g00720 Petunia axillaris HOM05D000151 ORTHO05D000074 2.9e-10 70.5 294 27.9
Nitab4.5_0000969g0010 Nicotiana tabacum HOM05D000151 ORTHO05D000074 5.0e-10 69.7 279 25.8
TAR636G2826 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.0e-10 69.7 346 24.6
CAN.G567.2 Capsicum annuum HOM05D000151 ORTHO05D000074 6.5e-10 69.3 285 26.0
Peaxi162Scf00848g00114 Petunia axillaris HOM05D000151 ORTHO05D000074 6.5e-10 69.3 312 24.7
Aqoxy6G01235 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.5e-10 68.9 251 22.7
Peaxi162Scf00078g00540 Petunia axillaris HOM05D000151 ORTHO05D000074 8.5e-10 68.9 149 31.5
Rhsim02G0225000 Rhododendron simsii HOM05D006999 ORTHO05D008936 1.5e-09 68.2 286 24.8
Solyc05g010540.2 Solanum lycopersicum HOM05D000151 ORTHO05D000074 1.5e-09 68.2 229 24.0
Peaxi162Scf00271g00224 Petunia axillaris HOM05D000151 ORTHO05D000074 1.9e-09 67.8 321 24.6
Peaxi162Scf39827g00001 Petunia axillaris HOM05D000151 ORTHO05D000074 1.9e-09 67.8 321 24.6
PGSC0003DMG400027899 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.9e-09 67.8 361 24.1
EL10Ac3g05384 Beta vulgaris HOM05D000151 ORTHO05D000074 3.2e-09 67.0 264 24.2
Peaxi162Scf00746g00028 Petunia axillaris HOM05D000151 ORTHO05D000074 3.2e-09 67.0 324 24.7
Nitab4.5_0001231g0150 Nicotiana tabacum HOM05D000151 ORTHO05D000074 4.2e-09 66.6 252 26.2
TWI31G0065 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.2e-09 66.6 322 23.6
TAR636G2429 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.2e-09 66.6 215 28.4
Hma1.2p1_0112F.1_g054880 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 5.5e-09 66.2 242 25.6
Solyc08g082485.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 5.5e-09 66.2 351 24.5
EL10Ac3g05276 Beta vulgaris HOM05D000151 ORTHO05D000074 7.2e-09 65.9 321 23.4
Solyc06g068630.4 Solanum lycopersicum HOM05D000151 ORTHO05D000074 7.2e-09 65.9 159 32.7
PGSC0003DMG400001764 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.2e-09 65.9 356 24.2
FAN15G2858 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.4e-09 65.5 316 24.1
PGSC0003DMG400012270 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.4e-09 65.5 363 24.2
Peaxi162Scf03184g00005 Petunia axillaris HOM05D000151 ORTHO05D000074 3.6e-08 63.5 352 22.7
Nitab4.5_0005962g0010 Nicotiana tabacum HOM05D000151 ORTHO05D000074 8.0e-08 62.4 241 28.6
PGSC0003DMG400003928 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.0e-07 62.0 312 26.9
PGSC0003DMG400041413 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.4e-07 61.6 363 23.4
FAN01G0776 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.8e-07 61.2 272 27.2
FvH4_7g21350 Fragaria vesca HOM05D000151 ORTHO05D000074 2.3e-07 60.8 274 27.0
Os11g0582700 Oryza sativa ssp. japonica HOM05D000151 ORTHO05D000074 2.3e-07 60.8 349 24.1
Rhsim02G0224000 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.3e-07 60.8 128 30.5
FAN06G3114 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.0e-07 60.5 271 28.0
TWI53G1253 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 3.0e-07 60.5 144 28.5
FAN20G0623 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.0e-07 60.1 325 23.4
PGSC0003DMG400014231 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.0e-07 60.1 140 28.6
PGSC0003DMG400035916 Solanum tuberosum HOM05D000151 ORTHO05D000074 5.2e-07 59.7 168 26.8
Hma1.2p1_0916F.1_g236545 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 8.8e-07 58.9 123 30.1
FAN10G1847 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.1e-06 58.5 274 27.0
Lj2P442T32 Lonicera japonica HOM05D000151 ORTHO05D000074 1.5e-06 58.2 159 25.8
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 1.5e-06 58.2 245 24.9
Hma1.2p1_0916F.1_g236540 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 2.0e-06 57.8 123 30.1
CAN.G567.6 Capsicum annuum HOM05D000151 ORTHO05D000074 2.6e-06 57.4 131 32.8
FvH4_7g21590 Fragaria vesca HOM05D000151 ORTHO05D000074 2.6e-06 57.4 272 27.2
FAN06G4102 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.6e-06 57.4 263 27.4
Nitab4.5_0000798g0020 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.6e-06 57.4 231 24.7
TAR365G0380 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.3e-06 57.0 193 30.1
PGSC0003DMG400012271 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.4e-06 56.6 247 27.9
Nitab4.5_0028739g0010 Nicotiana tabacum HOM05D000151 ORTHO05D000074 5.7e-06 56.2 244 27.0
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 7.5e-06 55.8 221 23.5
Peaxi162Scf00515g10013 Petunia axillaris HOM05D000795 ORTHO05D000706 7.5e-06 55.8 173 29.5


User provided reference genes

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