Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 3.0e-268 927.9 462 100.0
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 2.0e-224 782.3 462 85.7
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 2.2e-223 778.9 462 84.8
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 1.9e-222 775.8 462 84.2
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 1.1e-211 740.0 447 81.7
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 3.7e-194 681.8 447 77.2
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 1.8e-156 556.6 459 60.1
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 9.8e-155 550.8 462 60.0
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 2.7e-152 542.7 466 57.7
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 7.3e-150 534.6 459 60.1
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 1.2e-149 533.9 465 62.8
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 1.1e-145 520.8 458 58.1
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 4.1e-145 518.8 463 58.3
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 5.4e-145 518.5 437 59.3
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 2.1e-144 516.5 458 56.8
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 2.3e-143 513.1 462 56.3
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 2.5e-142 509.6 459 56.9
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.6e-141 506.9 411 61.6
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 2.8e-141 506.1 496 53.2
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 3.8e-138 495.7 454 54.0
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 4.9e-138 495.4 455 55.2
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 6.4e-138 495.0 462 53.2
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 1.4e-137 493.8 491 53.4
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 2.4e-137 493.0 462 53.0
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 5.4e-137 491.9 458 54.4
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 2.7e-136 489.6 459 54.2
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 3.5e-136 489.2 459 52.9
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 6.0e-136 488.4 458 54.6
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 8.6e-135 484.6 463 53.1
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 1.9e-134 483.4 464 54.7
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 1.2e-133 480.7 458 51.1
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 2.8e-133 479.6 457 53.4
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 2.8e-133 479.6 457 53.0
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 6.2e-133 478.4 458 53.3
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 8.9e-132 474.6 458 51.1
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 2.0e-131 473.4 457 52.5
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 1.3e-130 470.7 462 52.2
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 2.1e-128 463.4 464 52.2
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 2.7e-128 463.0 458 52.4
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 2.7e-128 463.0 460 52.0
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 7.8e-128 461.5 462 51.5
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 2.3e-127 459.9 460 51.7
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 3.3e-126 456.1 460 49.3
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 1.6e-125 453.8 460 51.5
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 2.8e-125 453.0 459 50.5
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 2.0e-123 446.8 463 50.5
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 3.4e-123 446.0 457 51.2
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 3.4e-123 446.0 457 50.1
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 3.4e-123 446.0 471 49.9
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 1.7e-122 443.7 459 50.3
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 1.7e-122 443.7 460 48.3
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 6.4e-122 441.8 457 50.5
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 6.4e-122 441.8 457 49.5
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 3.2e-121 439.5 464 49.8
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 3.2e-121 439.5 461 52.3
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 1.6e-120 437.2 445 51.5
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 2.7e-120 436.4 458 50.2
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 2.7e-120 436.4 473 48.8
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 1.0e-119 434.5 467 50.1
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 1.3e-119 434.1 462 50.0
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 1.8e-119 433.7 473 48.8
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 2.3e-119 433.3 502 45.6
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 3.9e-119 432.6 458 50.7
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 5.1e-119 432.2 462 49.6
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 1.6e-117 427.2 461 49.9
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 1.1e-116 424.5 463 48.8
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 2.4e-116 423.3 458 46.9
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 5.3e-116 422.2 467 48.8
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 6.9e-116 421.8 458 49.6
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 6.9e-116 421.8 461 48.6
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 6.9e-116 421.8 459 49.0
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 1.2e-115 421.0 458 49.8
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 4.5e-115 419.1 463 46.7
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 5.8e-115 418.7 458 46.1
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 7.1e-113 411.8 384 51.6
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 2.7e-112 409.8 439 46.5
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 7.9e-112 408.3 461 45.1
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 1.3e-111 407.5 475 48.2
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 2.3e-111 406.8 460 46.5
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 3.0e-111 406.4 448 48.4
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 6.7e-111 405.2 457 48.1
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 5.6e-110 402.1 459 45.3
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 7.4e-110 401.7 474 47.0
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 7.4e-110 401.7 403 51.4
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 9.0e-108 394.8 463 46.2
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 7.6e-107 391.7 460 46.5
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 1.0e-103 381.3 554 39.7
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 8.7e-103 378.3 459 44.2
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 4.3e-102 375.9 331 56.5
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 1.1e-97 361.3 468 42.5
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 4.2e-97 359.4 465 44.7
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 4.3e-94 349.4 469 41.8
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 2.6e-91 340.1 373 46.9
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 9.7e-86 321.6 462 39.6
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 5.9e-83 312.4 353 44.8
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 3.6e-80 303.1 475 37.3
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 8.8e-79 298.5 450 38.0
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 5.7e-78 295.8 464 36.4
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 1.5e-73 281.2 459 38.1
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 6.1e-72 275.8 484 36.2
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.2e-70 271.6 218 61.9
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 1.5e-70 271.2 373 38.6
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 4.7e-64 249.6 372 37.4
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 4.4e-62 243.0 350 40.9
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 3.7e-61 240.0 289 44.6
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 1.4e-44 184.9 336 33.0
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 1.8e-44 184.5 195 47.7
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 2.2e-37 161.0 274 34.7
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 6.4e-37 159.5 460 27.6
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 1.2e-32 145.2 213 36.2
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 4.7e-32 143.3 327 28.4
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 7.8e-27 125.9 115 53.0
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 7.3e-25 119.4 139 45.3
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 2.4e-23 114.4 231 30.7
AagrBONN_evm.TU.Sc2ySwM_228.2481 Anthoceros agrestis HOM05D006101 ORTHO05D007422 6.0e-19 99.8 431 25.8
SMO351G0356 Selaginella moellendorffii HOM05D006101 ORTHO05D007422 6.0e-19 99.8 318 26.1
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 1.7e-18 98.2 178 34.3
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 2.3e-18 97.8 88 55.7
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 5.1e-18 96.7 137 38.7
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 2.8e-16 90.9 115 44.3


User provided reference genes

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