Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 4.4e-62 241.1 122 100.0
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.9e-44 182.6 115 80.9
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.6e-43 179.5 115 79.1
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 6.0e-43 177.6 103 87.4
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 6.0e-43 177.6 115 78.3
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.0e-42 176.8 115 78.3
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 3.0e-42 175.3 103 86.4
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 6.6e-42 174.1 115 77.4
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 4.1e-36 154.8 100 79.0
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 1.6e-35 152.9 97 76.3
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 3.5e-35 151.8 97 76.3
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 2.3e-34 149.1 102 72.5
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 8.6e-34 147.1 103 71.8
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 3.3e-33 145.2 110 66.4
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 4.3e-33 144.8 98 71.4
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 4.3e-33 144.8 114 62.3
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 9.6e-33 143.7 101 71.3
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 9.6e-33 143.7 109 64.2
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.6e-32 142.9 103 69.9
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 1.6e-32 142.9 110 65.5
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 2.8e-32 142.1 99 70.7
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 4.7e-32 141.4 96 71.9
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 6.2e-32 141.0 103 69.9
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.4e-31 139.8 109 63.3
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 5.2e-31 137.9 101 65.3
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 2.0e-30 136.0 109 62.4
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 3.4e-30 135.2 108 61.1
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 9.9e-30 133.7 103 66.0
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 1.3e-29 133.3 99 63.6
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.7e-29 132.9 94 68.1
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 4.9e-29 131.3 96 66.7
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 1.1e-28 130.2 103 63.1
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 1.1e-28 130.2 103 62.1
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 1.1e-28 130.2 92 69.6
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.4e-28 129.8 103 62.1
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 1.4e-28 129.8 106 59.4
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 1.4e-28 129.8 96 64.6
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 1.9e-28 129.4 100 61.0
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 1.9e-28 129.4 94 66.0
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 3.2e-28 128.6 99 63.6
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 4.2e-28 128.3 99 60.6
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 5.4e-28 127.9 96 64.6
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 7.1e-28 127.5 103 60.2
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 7.1e-28 127.5 103 61.2
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 7.1e-28 127.5 91 65.9
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 7.1e-28 127.5 96 62.5
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 9.3e-28 127.1 96 62.5
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 1.2e-27 126.7 96 63.5
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 2.1e-27 125.9 90 66.7
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 2.7e-27 125.6 132 52.3
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 3.5e-27 125.2 96 63.5
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 6.0e-27 124.4 115 53.9
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 3.9e-26 121.7 109 55.0
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 3.9e-26 121.7 103 55.3
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 5.1e-26 121.3 96 61.5
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 5.1e-26 121.3 103 58.3
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 1.1e-25 120.2 96 60.4
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 1.5e-25 119.8 94 57.4
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 3.3e-25 118.6 93 61.3
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 3.6e-24 115.2 111 48.6
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 6.2e-24 114.4 89 61.8
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 1.1e-23 113.6 96 56.2
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 1.1e-23 113.6 96 56.2
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 1.1e-23 113.6 105 54.3
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.8e-23 112.8 92 58.7
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 4.0e-23 111.7 92 59.8
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.2e-22 110.2 100 52.0
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 2.6e-22 109.0 96 52.1
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 3.4e-22 108.6 102 52.0
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 3.4e-22 108.6 95 55.8
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 3.4e-22 108.6 115 48.7
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 5.8e-22 107.8 95 54.7
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 7.6e-22 107.5 95 54.7
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 7.6e-22 107.5 95 54.7
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 7.6e-22 107.5 95 54.7
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 7.6e-22 107.5 100 52.0
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 9.9e-22 107.1 95 53.7
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 9.9e-22 107.1 100 52.0
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 9.9e-22 107.1 105 53.3
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 1.3e-21 106.7 130 45.4
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 1.3e-21 106.7 102 51.0
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 1.3e-21 106.7 102 51.0
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 2.2e-21 105.9 95 53.7
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 2.2e-21 105.9 95 53.7
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 2.2e-21 105.9 100 53.0
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 1.1e-20 103.6 88 54.5
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 1.1e-20 103.6 91 54.9
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 2.4e-20 102.4 103 47.6
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 9.3e-20 100.5 97 46.4
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 3.0e-18 95.5 97 49.5
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 2.5e-17 92.4 91 49.5
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 4.0e-15 85.1 62 64.5
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.7e-13 79.7 69 56.5
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 1.4e-12 76.6 49 73.5
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.2e-11 73.6 57 64.9
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 3.0e-10 68.9 69 43.5
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 4.3e-09 65.1 43 72.1
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 1.8e-07 59.7 46 54.3
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 3.1e-07 58.9 43 65.1
CAN.G672.6 Capsicum annuum HOM05D000185 ORTHO05D000105 2.0e-06 56.2 29 86.2
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 2.0e-06 56.2 42 61.9
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 2.0e-06 56.2 58 50.0
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 5.8e-06 54.7 40 62.5


User provided reference genes

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