Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G542.6 Capsicum annuum HOM05D000053 ORTHO05D000035 6.1e-76 287.7 183 100.0
Sopen12g007080 Solanum pennellii HOM05D000053 ORTHO05D000035 1.7e-33 146.7 181 64.6
Sopen12g007020 Solanum pennellii HOM05D000053 ORTHO05D000035 1.6e-31 140.2 181 63.5
PGSC0003DMG400015352 Solanum tuberosum HOM05D000686 ORTHO05D000035 4.6e-31 138.7 182 62.6
PGSC0003DMG400015347 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.0e-30 136.0 181 63.5
PGSC0003DMG401002888 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.1e-30 135.2 182 62.1
Solyc12g009530.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.7e-30 134.8 182 62.1
PGSC0003DMG400015348 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.1e-29 134.0 181 63.5
PGSC0003DMG401002909 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.5e-29 133.7 182 62.1
PGSC0003DMG400034676 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.3e-28 130.6 185 61.6
PGSC0003DMG400002906 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.1e-28 129.8 183 61.2
Solyc12g009730.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.7e-28 129.0 182 62.1
PGSC0003DMG400006655 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.7e-28 129.0 184 62.0
PGSC0003DMG400015351 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.8e-28 128.6 183 61.2
PGSC0003DMG400015345 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.2e-28 128.3 181 62.4
Sopen12g007030 Solanum pennellii HOM05D000053 ORTHO05D000035 8.1e-28 127.9 181 62.4
PGSC0003DMG400011708 Solanum tuberosum HOM05D000053 ORTHO05D000035 8.1e-28 127.9 182 59.3
Solyc12g009510.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.8e-27 126.7 182 61.5
Sopen12g004670 Solanum pennellii HOM05D000053 ORTHO05D000035 3.1e-27 125.9 183 60.7
Solyc04g054450.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 9.0e-27 124.4 182 60.4
PGSC0003DMG400007915 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.0e-27 124.4 182 61.0
PGSC0003DMG402002888 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.2e-26 124.0 182 59.9
PGSC0003DMG400006652 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.2e-25 119.8 182 59.9
Solyc12g009520.2 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.4e-24 116.3 179 58.7
PGSC0003DMG400002885 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.4e-24 116.3 179 58.1
PGSC0003DMG400024437 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.3e-24 114.4 182 59.3
PGSC0003DMG400018045 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.1e-23 113.2 182 57.7
CAN.G551.88 Capsicum annuum HOM05D000053 ORTHO05D000035 3.5e-23 112.5 182 58.2
PGSC0003DMG400002910 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.8e-22 110.2 183 57.9
PGSC0003DMG400032286 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.8e-22 110.2 99 60.6
Solyc12g009780.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.3e-21 105.9 178 59.0
PGSC0003DMG402006653 Solanum tuberosum HOM05D000053 ORTHO05D000035 7.4e-21 104.8 181 56.9
Nitab4.5_0001846g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 3.7e-20 102.4 183 48.6
Nitab4.5_0002329g0040 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.4e-19 100.5 85 63.5
PGSC0003DMG401006653 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.8e-19 100.1 159 58.5
Sopen12g004520 Solanum pennellii HOM05D000053 ORTHO05D000035 2.4e-19 99.8 192 53.6
PGSC0003DMG400002887 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.1e-19 99.4 200 52.5
CAN.G988.1 Capsicum annuum HOM05D000053 ORTHO05D000035 6.9e-19 98.2 150 62.0
PGSC0003DMG400015353 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.9e-19 98.2 76 67.1
Sopen12g004660 Solanum pennellii HOM05D000524 ORTHO05D000381 4.5e-18 95.5 103 49.5
Solyc12g009690.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.0e-17 94.4 103 49.5
PGSC0003DMG400002937 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.9e-17 92.8 75 64.0
Sopen12g004510 Solanum pennellii HOM05D000053 ORTHO05D000035 1.9e-16 90.1 75 62.7
PGSC0003DMG400024438 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.0e-14 82.8 123 68.3
Solyc12g009720.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.7e-14 81.6 142 60.6
PGSC0003DMG400015354 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.7e-13 77.8 134 62.7
PGSC0003DMG401018044 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.3e-12 77.4 134 60.4
Ciclev10015570m.g Citrus clementina HOM05D000053 ORTHO05D000035 4.8e-12 75.5 172 50.6
PGSC0003DMG400045777 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.1e-11 72.4 126 60.3
CAN.G551.87 Capsicum annuum HOM05D000053 ORTHO05D000035 6.9e-11 71.6 99 71.7
Nitab4.5_0002329g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.2e-10 70.9 46 71.7
Ciclev10017514m.g Citrus clementina HOM05D000053 ORTHO05D000035 2.6e-10 69.7 146 54.8
CAN.G575.9 Capsicum annuum HOM05D000053 ORTHO05D000035 5.9e-10 68.6 152 52.0
Ciclev10017615m.g Citrus clementina HOM05D000053 ORTHO05D000035 1.3e-09 67.4 146 54.8
PGSC0003DMG400002886 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.2e-09 66.6 67 53.7
Peaxi162Scf01269g00016 Petunia axillaris HOM05D000053 ORTHO05D000035 3.8e-09 65.9 134 35.1
CAN.G911.18 Capsicum annuum HOM05D000053 ORTHO05D000035 6.5e-09 65.1 149 50.3
Ciclev10018217m.g Citrus clementina HOM05D000053 ORTHO05D000035 6.5e-09 65.1 146 50.0
MBI14_g23361_MAGBIO Magnolia biondii HOM05D000053 ORTHO05D000448 1.9e-08 63.5 69 50.7
Sopen08g026250 Solanum pennellii HOM05D000053 ORTHO05D000035 2.5e-08 63.2 182 46.2
Gorai.012G117200 Gossypium raimondii HOM05D000053 ORTHO05D000448 3.2e-08 62.8 173 48.0
DCAR_001832 Daucus carota HOM05D000053 ORTHO05D000035 4.2e-08 62.4 139 54.0
PGSC0003DMG400001832 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.2e-08 62.4 182 47.3
Manes.03G091122 Manihot esculenta HOM05D000053 ORTHO05D000035 5.5e-08 62.0 176 47.7
PGSC0003DMG400001829 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.5e-08 62.0 169 50.9
PGSC0003DMG400006725 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.5e-08 62.0 138 33.3
Ciclev10017448m.g Citrus clementina HOM05D000053 ORTHO05D000035 1.2e-07 60.8 146 52.7
Gohir.A04G094000 Gossypium hirsutum HOM05D000053 ORTHO05D000448 1.2e-07 60.8 173 47.4
CAN.G911.14 Capsicum annuum HOM05D000053 ORTHO05D000035 1.6e-07 60.5 161 50.3
Peaxi162Scf00086g00054 Petunia axillaris HOM05D000053 ORTHO05D000035 1.6e-07 60.5 150 30.7
PGSC0003DMG400001830 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.1e-07 60.1 159 50.9
PGSC0003DMG400028591 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.1e-07 60.1 190 45.8
CAN.G134.225 Capsicum annuum HOM05D000053 ORTHO05D000035 2.7e-07 59.7 165 51.5
PGSC0003DMG401001828 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.7e-07 59.7 182 47.8
Ciclev10023586m.g Citrus clementina HOM05D000053 ORTHO05D000035 3.6e-07 59.3 64 50.0
Sopen08g026260 Solanum pennellii HOM05D000053 ORTHO05D000035 3.6e-07 59.3 153 51.6
PGSC0003DMG400022452 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.6e-07 59.3 192 44.8
CAN.G1579.20 Capsicum annuum HOM05D000053 ORTHO05D000035 4.6e-07 58.9 77 44.2
CAN.G2075.5 Capsicum annuum HOM05D000053 ORTHO05D000035 4.6e-07 58.9 77 44.2
Ciclev10018078m.g Citrus clementina HOM05D000053 ORTHO05D000035 4.6e-07 58.9 176 45.5
CsaV3_3G033520 Cucumis sativus L. HOM05D000053 ORTHO05D000448 4.6e-07 58.9 163 47.2
PGSC0003DMG400002908 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.6e-07 58.9 45 64.4
Peaxi162Scf00434g00743 Petunia axillaris HOM05D000053 ORTHO05D012842 6.1e-07 58.5 183 44.8
CAN.G572.27 Capsicum annuum HOM05D000053 ORTHO05D000035 7.9e-07 58.2 148 53.4
Gohir.D04G133100 Gossypium hirsutum HOM05D000053 ORTHO05D000448 7.9e-07 58.2 155 50.3
Solyc12g100020.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 7.9e-07 58.2 143 30.1
arahy.Tifrunner.gnm1.ann1.WXTN0P Arachis hypogaea HOM05D000053 ORTHO05D000035 1.0e-06 57.8 72 38.9
Gohir.D05G375550 Gossypium hirsutum HOM05D000053 ORTHO05D000035 1.4e-06 57.4 159 30.8
TWI59G1268 Tripterygium wilfordii HOM05D000053 ORTHO05D000035 1.4e-06 57.4 157 29.3
CAN.G911.21 Capsicum annuum HOM05D000053 ORTHO05D000035 1.8e-06 57.0 158 34.8
PGR083G1407 Punica granatum HOM05D000053 ORTHO05D000035 1.8e-06 57.0 183 41.0
SalBow5G1696 Salvia bowleyana HOM05D000053 ORTHO05D000448 1.8e-06 57.0 81 40.7
DCAR_012081 Daucus carota HOM05D000053 ORTHO05D000035 2.3e-06 56.6 158 48.7
Gohir.D04G133300 Gossypium hirsutum HOM05D000053 ORTHO05D000448 2.3e-06 56.6 155 50.3
SalBow5G3751 Salvia bowleyana HOM05D000053 ORTHO05D000448 2.3e-06 56.6 80 41.2
Solyc06g033920.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.3e-06 56.6 182 46.2
Sopen08g019760 Solanum pennellii HOM05D000053 ORTHO05D000035 2.3e-06 56.6 159 49.7
Thecc.07G159200 Theobroma cacao HOM05D000053 ORTHO05D000035 2.3e-06 56.6 171 45.0
Gohir.D05G356833 Gossypium hirsutum HOM05D000053 ORTHO05D000035 3.0e-06 56.2 146 52.7
Gorai.009G389100 Gossypium raimondii HOM05D000053 ORTHO05D000035 3.0e-06 56.2 146 52.7
Potri.011G104600 Populus trichocarpa HOM05D000053 ORTHO05D000035 3.0e-06 56.2 62 48.4
PGR014G0003 Punica granatum HOM05D000053 ORTHO05D000035 3.0e-06 56.2 72 36.1
PGSC0003DMG400001831 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.0e-06 56.2 179 46.9
Medtr2g078420 Medicago truncatula HOM05D000053 ORTHO05D000035 3.9e-06 55.8 73 41.1
QL08p008585 Quercus lobata HOM05D000053 ORTHO05D000035 3.9e-06 55.8 181 34.3
CSS0020308 Camellia sinensis var. sinensis HOM05D000053 ORTHO05D000035 5.1e-06 55.5 153 50.3
CSS0039175 Camellia sinensis var. sinensis HOM05D000053 ORTHO05D000035 5.1e-06 55.5 153 50.3
CANSAT11G2193 Cannabis sativa HOM05D000053 ORTHO05D000035 5.1e-06 55.5 173 42.2
CAN.G134.222 Capsicum annuum HOM05D000053 ORTHO05D000035 5.1e-06 55.5 157 51.0
CAN.G1579.25 Capsicum annuum HOM05D000053 ORTHO05D000035 5.1e-06 55.5 60 50.0
CAN.G1768.1 Capsicum annuum HOM05D000053 ORTHO05D000058 5.1e-06 55.5 60 50.0
CAN.G2075.2 Capsicum annuum HOM05D000053 ORTHO05D000035 5.1e-06 55.5 60 50.0
ECA247G1181 Erigeron canadensis HOM05D000053 ORTHO05D000035 5.1e-06 55.5 180 44.4
Gohir.A01G052666 Gossypium hirsutum HOM05D000053 ORTHO05D000035 5.1e-06 55.5 151 48.3
Gohir.D05G376232 Gossypium hirsutum HOM05D000053 ORTHO05D000035 5.1e-06 55.5 147 32.7
Lj8C67G6 Lonicera japonica HOM05D000053 ORTHO05D000035 5.1e-06 55.5 157 49.7
MBI14_g18955_MAGBIO Magnolia biondii HOM05D000053 ORTHO05D000448 5.1e-06 55.5 156 28.8
TPR.G5585 Trifolium pratense HOM05D000053 ORTHO05D000448 5.1e-06 55.5 47 57.4
arahy.Tifrunner.gnm1.ann1.PZ8KIT Arachis hypogaea HOM05D000053 ORTHO05D000035 6.7e-06 55.1 68 38.2
Medtr6g471240 Medicago truncatula HOM05D000053 ORTHO05D000035 6.7e-06 55.1 163 48.5
Solyc01g098370.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.7e-06 55.1 154 49.4
Sopen01g041920 Solanum pennellii HOM05D000053 ORTHO05D000035 6.7e-06 55.1 157 51.0
CAN.G572.26 Capsicum annuum HOM05D000053 ORTHO05D000035 8.8e-06 54.7 158 50.6
DCAR_012082 Daucus carota HOM05D000053 ORTHO05D000035 8.8e-06 54.7 159 47.8
Gorai.007G329400 Gossypium raimondii HOM05D000053 ORTHO05D000035 8.8e-06 54.7 181 42.0
Hma1.2p1_0703F.1_g206440 Hydrangea macrophylla HOM05D000053 ORTHO05D000035 8.8e-06 54.7 158 48.1
Peaxi162Scf00084g00058 Petunia axillaris HOM05D000053 ORTHO05D000035 8.8e-06 54.7 151 52.3
Psat0s4150g0040 Pisum sativum HOM05D000053 ORTHO05D000035 8.8e-06 54.7 161 46.6


User provided reference genes

Program Settings