Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G539.1 Capsicum annuum HOM05D000032 ORTHO05D043439 4.8e-51 204.1 99 100.0
CAN.G31.10 Capsicum annuum HOM05D000032 ORTHO05D007378 1.8e-42 175.6 99 86.9
Sopen11g020630 Solanum pennellii HOM05D000032 ORTHO05D007378 3.6e-22 108.2 98 59.2
Solyc11g045215.1 Solanum lycopersicum HOM05D000032 ORTHO05D043439 1.7e-19 99.4 90 58.9
Nitab4.5_0000607g0070 Nicotiana tabacum HOM05D000032 ORTHO05D007378 2.4e-18 95.5 95 53.7
Nitab4.5_0000100g0030 Nicotiana tabacum HOM05D000032 ORTHO05D007378 1.2e-17 93.2 95 52.6
TAR636G3150 Trochodendron aralioides HOM05D000032 ORTHO05D007378 8.6e-16 87.0 58 65.5
QL09p046662 Quercus lobata HOM05D000032 ORTHO05D007378 1.1e-13 80.1 92 47.8
CDE12G0126 Ceratophyllum demersum HOM05D000032 ORTHO05D007378 1.4e-13 79.7 57 61.4
HPP92_015296 Vanilla planifolia HOM05D000032 ORTHO05D007378 2.3e-13 79.0 55 67.3
Cfa010333 Carpinus fangiana HOM05D000032 ORTHO05D007378 3.1e-13 78.6 69 55.1
Haze_03303 Corylus avellana HOM05D000032 ORTHO05D007378 3.1e-13 78.6 69 55.1
HPP92_010024 Vanilla planifolia HOM05D000032 ORTHO05D007378 3.1e-13 78.6 67 56.7
Aqoxy5G03969 Aquilegia oxysepala HOM05D000032 ORTHO05D007378 4.0e-13 78.2 58 60.3
Cc04_g12290 Coffea canephora HOM05D000032 ORTHO05D007378 5.2e-13 77.8 80 51.2
Dinv29492 Davidia involucrata HOM05D000032 ORTHO05D007378 8.9e-13 77.0 65 60.0
Nn4g25241 Nelumbo nucifera HOM05D000032 ORTHO05D007378 2.0e-12 75.9 61 60.7
PGR031G1822 Punica granatum HOM05D000032 ORTHO05D007378 2.6e-12 75.5 88 48.9
Eucgr.B02191 Eucalyptus grandis HOM05D000032 ORTHO05D007378 1.7e-11 72.8 47 68.1
Eucgr.B02194 Eucalyptus grandis HOM05D000032 ORTHO05D007378 3.7e-11 71.6 47 66.0
GSVIVG01017719001 Vitis vinifera HOM05D000032 ORTHO05D007378 3.7e-11 71.6 51 68.6
PSO782G0571 Papaver somniferum HOM05D000032 ORTHO05D007378 4.9e-11 71.2 64 51.6
Lsat_1_v5_gn_8_109040 Lactuca sativa HOM05D000032 ORTHO05D007378 1.1e-10 70.1 68 45.6
PSO063G4518 Papaver somniferum HOM05D000032 ORTHO05D007378 1.1e-10 70.1 64 50.0
ATR0796G242 Amborella trichopoda HOM05D000032 ORTHO05D007378 1.4e-10 69.7 73 49.3
HanXRQChr12g0357911 Helianthus annuus HOM05D000032 ORTHO05D007378 3.2e-10 68.6 95 38.9
AUR62002520 Chenopodium quinoa HOM05D000032 ORTHO05D007378 9.2e-10 67.0 64 50.0
Eucgr.L01074 Eucalyptus grandis HOM05D000032 ORTHO05D007378 2.1e-09 65.9 47 61.7
AUR62023674 Chenopodium quinoa HOM05D000032 ORTHO05D007378 7.8e-09 63.9 54 53.7
Hund22662 Selenicereus undatus HOM05D000032 ORTHO05D007378 3.0e-08 62.0 96 40.6
ECA236G4337 Erigeron canadensis HOM05D000032 ORTHO05D007378 3.9e-08 61.6 52 53.8
Ah.13g073080 Amaranthus hybridus HOM05D000032 ORTHO05D007378 4.3e-07 58.2 101 35.6
CiPaw.14G043800 Carya illinoinensis HOM05D000032 ORTHO05D007378 7.3e-07 57.4 44 61.4
DCAR_026922 Daucus carota HOM05D000032 ORTHO05D007378 9.5e-07 57.0 58 44.8
Sc25g0001800 Simmondsia chinensis HOM05D000032 ORTHO05D007378 9.5e-07 57.0 48 54.2
Ciclev10019165m.g Citrus clementina HOM05D000032 ORTHO05D007378 1.6e-06 56.2 55 54.5


User provided reference genes

Program Settings