Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G536.3 Capsicum annuum HOM05D000834 ORTHO05D006956 1.5e-186 656.0 328 100.0
Sopen09g025590 Solanum pennellii HOM05D000834 ORTHO05D006956 5.0e-169 597.8 316 94.0
Solyc09g064450.3 Solanum lycopersicum HOM05D000834 ORTHO05D006956 3.2e-168 595.1 316 93.4
Nitab4.5_0002435g0060 Nicotiana tabacum HOM05D000834 ORTHO05D006956 2.4e-155 552.4 318 88.4
Nitab4.5_0000385g0020 Nicotiana tabacum HOM05D000834 ORTHO05D006956 1.6e-154 549.7 316 88.6
Peaxi162Scf00043g00251 Petunia axillaris HOM05D000834 ORTHO05D006956 6.8e-150 534.3 311 88.4
SGA_v2.0_scaffold1G00665 Striga asiatica HOM05D000121 ORTHO05D000102 3.2e-144 515.4 318 80.8
GSVIVG01028438001 Vitis vinifera HOM05D000834 ORTHO05D006956 6.1e-143 511.1 316 82.3
Cc01_g17740 Coffea canephora HOM05D000834 ORTHO05D006956 1.0e-142 510.4 318 80.5
Lj1C74T17 Lonicera japonica HOM05D000834 ORTHO05D006956 2.3e-142 509.2 321 81.3
Haze_24714 Corylus avellana HOM05D000834 ORTHO05D006956 4.0e-142 508.4 316 79.7
Cfa002491 Carpinus fangiana HOM05D000834 ORTHO05D006956 5.2e-142 508.1 316 79.4
Duzib138G0050 Durio zibethinus HOM05D000834 ORTHO05D006956 5.2e-142 508.1 317 82.0
Hund05490 Selenicereus undatus HOM05D000834 ORTHO05D006956 5.2e-142 508.1 316 81.3
PSO832G2974 Papaver somniferum HOM05D000834 ORTHO05D006956 6.8e-142 507.7 315 80.6
CiPaw.03G271600 Carya illinoinensis HOM05D000834 ORTHO05D006956 2.0e-141 506.1 316 79.7
Gorai.007G150200 Gossypium raimondii HOM05D000834 ORTHO05D006956 2.0e-141 506.1 317 81.1
FvH4_2g20370 Fragaria vesca HOM05D000834 ORTHO05D006956 4.4e-141 505.0 316 81.0
TAR362G0351 Trochodendron aralioides HOM05D000834 ORTHO05D006956 4.4e-141 505.0 316 81.0
Actinidia09509 Actinidia chinensis HOM05D000834 ORTHO05D006956 7.5e-141 504.2 316 79.7
Sabra02G0194500 Salix brachista HOM05D000834 ORTHO05D006956 7.5e-141 504.2 316 80.4
Gohir.D11G140000 Gossypium hirsutum HOM05D000834 ORTHO05D006956 9.8e-141 503.8 317 81.1
PSO764G0197 Papaver somniferum HOM05D000834 ORTHO05D006956 9.8e-141 503.8 315 79.7
Potri.002G255900 Populus trichocarpa HOM05D000834 ORTHO05D006956 9.8e-141 503.8 316 80.4
Potri.014G193300 Populus trichocarpa HOM05D000834 ORTHO05D006956 9.8e-141 503.8 316 80.1
Migut.D00483 Erythranthe guttata HOM05D000834 ORTHO05D006956 2.2e-140 502.7 316 78.8
Lsat_1_v5_gn_5_181100 Lactuca sativa HOM05D000834 ORTHO05D006956 2.8e-140 502.3 316 79.4
FAN15G3585 Fragaria x ananassa HOM05D000834 ORTHO05D006956 3.7e-140 501.9 316 80.1
PGR044G1351 Punica granatum HOM05D000834 ORTHO05D006956 3.7e-140 501.9 316 80.7
CSS0050145 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 6.3e-140 501.1 316 81.0
SalBow4G1359 Salvia bowleyana HOM05D000834 ORTHO05D006956 6.3e-140 501.1 317 80.4
QL09p041638 Quercus lobata HOM05D000834 ORTHO05D006956 1.1e-139 500.4 318 79.6
HanXRQChr01g0014941 Helianthus annuus HOM05D000834 ORTHO05D006956 2.4e-139 499.2 316 79.1
Gohir.A11G133900 Gossypium hirsutum HOM05D000834 ORTHO05D006956 3.1e-139 498.8 317 80.1
RcHm_v2.0_Chr6g0286481 Rosa chinensis HOM05D000834 ORTHO05D006956 3.1e-139 498.8 316 80.4
arahy.Tifrunner.gnm1.ann1.WYWU3M Arachis hypogaea HOM05D000834 ORTHO05D006956 4.1e-139 498.4 316 79.1
TPR.G5902 Trifolium pratense HOM05D000834 ORTHO05D006956 4.1e-139 498.4 316 78.5
FAN27G0744 Fragaria x ananassa HOM05D000834 ORTHO05D006956 5.4e-139 498.0 316 79.1
MD10G1175400 Malus domestica HOM05D000834 ORTHO05D006956 7.0e-139 497.7 316 79.7
FAN24G3261 Fragaria x ananassa HOM05D000834 ORTHO05D006956 9.2e-139 497.3 316 79.4
Thecc.01G249300 Theobroma cacao HOM05D000834 ORTHO05D006956 9.2e-139 497.3 317 79.2
arahy.Tifrunner.gnm1.ann1.G250MW Arachis hypogaea HOM05D000834 ORTHO05D006956 1.6e-138 496.5 316 78.8
Medtr1g069455 Medicago truncatula HOM05D000834 ORTHO05D006956 2.0e-138 496.1 316 78.5
Nn1g03003 Nelumbo nucifera HOM05D000834 ORTHO05D006956 2.0e-138 496.1 318 79.6
Oeu052085.1 Olea europaea HOM05D000834 ORTHO05D006956 2.0e-138 496.1 316 79.7
Sc05g0002850 Simmondsia chinensis HOM05D000834 ORTHO05D006956 2.7e-138 495.7 316 79.1
CANSAT01G0496 Cannabis sativa HOM05D000834 ORTHO05D006956 3.5e-138 495.4 316 77.8
CANSAT01G1591 Cannabis sativa HOM05D000834 ORTHO05D006956 3.5e-138 495.4 316 77.8
AUR62025434 Chenopodium quinoa HOM05D000834 ORTHO05D006956 4.5e-138 495.0 316 79.7
Manes.13G039100 Manihot esculenta HOM05D000834 ORTHO05D006956 7.7e-138 494.2 317 80.4
Prupe.8G214700 Prunus persica HOM05D000834 ORTHO05D006956 7.7e-138 494.2 316 79.1
MD05G1187700 Malus domestica HOM05D000834 ORTHO05D006956 1.0e-137 493.8 316 78.5
Glyma.13G127400 Glycine max HOM05D000834 ORTHO05D006956 1.3e-137 493.4 316 77.5
TWI12G0869 Tripterygium wilfordii HOM05D000834 ORTHO05D006956 1.7e-137 493.0 316 77.8
CSS0037788 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 3.8e-137 491.9 322 78.9
BcaC07g41219 Brassica carinata HOM05D000834 ORTHO05D006956 8.6e-137 490.7 318 77.4
Manes.12G038400 Manihot esculenta HOM05D000834 ORTHO05D006956 1.1e-136 490.3 315 79.7
MSTRG.18357 Avicennia marina HOM05D000834 ORTHO05D006956 1.5e-136 490.0 318 78.0
Sp3g33600 Schrenkiella parvula HOM05D000834 ORTHO05D006956 1.5e-136 490.0 318 77.7
BcaB08g34904 Brassica carinata HOM05D000834 ORTHO05D006956 1.9e-136 489.6 318 77.4
CsaV3_6G007320 Cucumis sativus L. HOM05D000834 ORTHO05D006956 1.9e-136 489.6 317 78.2
BolC8t51785H Brassica oleracea HOM05D000834 ORTHO05D006956 3.3e-136 488.8 317 77.3
BraA09t41279Z Brassica rapa HOM05D000834 ORTHO05D006956 7.3e-136 487.6 318 77.4
ECA248G1156 Erigeron canadensis HOM05D000121 ORTHO05D000102 7.3e-136 487.6 319 75.5
Phvul.007G153700 Phaseolus vulgaris HOM05D000834 ORTHO05D006956 7.3e-136 487.6 316 77.2
BcaB07g31592 Brassica carinata HOM05D000834 ORTHO05D006956 1.6e-135 486.5 318 77.0
Carub.0003s3474 Capsella rubella HOM05D000834 ORTHO05D006956 1.6e-135 486.5 318 76.7
COL.COLO4_02902 Corchorus olitorius HOM05D000834 ORTHO05D006956 1.6e-135 486.5 317 78.2
VMungo0720G2048 Vigna mungo HOM05D000834 ORTHO05D006956 2.1e-135 486.1 316 76.6
Sed0018887 Sechium edule HOM05D000834 ORTHO05D006956 3.6e-135 485.3 316 77.2
BcaC04g22796 Brassica carinata HOM05D000834 ORTHO05D006956 4.7e-135 485.0 318 77.0
BolC9t54430H Brassica oleracea HOM05D000834 ORTHO05D006956 4.7e-135 485.0 318 77.0
DCAR_004694 Daucus carota HOM05D000834 ORTHO05D006956 4.7e-135 485.0 316 76.9
A09p58940 Brassica napus HOM05D000834 ORTHO05D006956 6.1e-135 484.6 296 80.4
Psat6g062480 Pisum sativum HOM05D000834 ORTHO05D006956 6.1e-135 484.6 316 76.9
Aa31LG8G17350 Aethionema arabicum HOM05D000834 ORTHO05D006956 8.0e-135 484.2 318 76.7
C08p42260 Brassica napus HOM05D000834 ORTHO05D006956 8.0e-135 484.2 296 80.4
BraA07t27827Z Brassica rapa HOM05D000834 ORTHO05D006956 8.0e-135 484.2 318 77.0
BcaC06g36723 Brassica carinata HOM05D000834 ORTHO05D006956 1.0e-134 483.8 318 76.7
BraA09t36931Z Brassica rapa HOM05D000834 ORTHO05D006956 1.0e-134 483.8 318 77.0
Eucgr.K01422 Eucalyptus grandis HOM05D000834 ORTHO05D006956 1.0e-134 483.8 316 77.2
AL3G53320 Arabidopsis lyrata HOM05D000834 ORTHO05D006956 1.4e-134 483.4 318 75.8
Rhsim01G0259900 Rhododendron simsii HOM05D000834 ORTHO05D006956 1.4e-134 483.4 339 73.5
C07p00720 Brassica napus HOM05D000834 ORTHO05D006956 1.8e-134 483.0 317 76.7
ClCG06G001380 Citrullus lanatus HOM05D000834 ORTHO05D006956 2.3e-134 482.6 316 76.9
A07p00360 Brassica napus HOM05D000834 ORTHO05D000909 3.0e-134 482.3 317 77.0
BolC7t40517H Brassica oleracea HOM05D000834 ORTHO05D006956 4.0e-134 481.9 317 76.7
CDE02G1088 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 4.0e-134 481.9 316 77.5
Lalb_Chr02g0152761 Lupinus albus HOM05D000834 ORTHO05D006956 6.8e-134 481.1 316 75.9
AT2G20360 Arabidopsis thaliana HOM05D000834 ORTHO05D006956 8.9e-134 480.7 318 75.8
MELO3C022394.2 Cucumis melo HOM05D000834 ORTHO05D006956 2.0e-133 479.6 332 74.1
Lj5g0006902 Lotus japonicus HOM05D000834 ORTHO05D006956 2.0e-133 479.6 316 75.9
CARHR110880 Cardamine hirsuta HOM05D000834 ORTHO05D006956 2.6e-133 479.2 318 75.5
Thhalv10002002m.g Eutrema salsugineum HOM05D000834 ORTHO05D006956 5.7e-133 478.0 317 77.0
A09p12840 Brassica napus HOM05D000834 ORTHO05D006956 9.8e-133 477.2 313 77.0
Atru.chr5.1869 Acer truncatum HOM05D000834 ORTHO05D006956 1.3e-132 476.9 317 75.7
Lalb_Chr06g0170741 Lupinus albus HOM05D000834 ORTHO05D006956 2.2e-132 476.1 316 75.3
THA.LOC104820067 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 2.2e-132 476.1 318 74.5
CDE09G1390 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 2.9e-132 475.7 312 76.9
THA.LOC104814534 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 1.1e-131 473.8 316 74.7
C09p15230 Brassica napus HOM05D000834 ORTHO05D006956 4.1e-131 471.9 296 79.4
unitig_22.g6307 Utricularia gibba HOM05D000834 ORTHO05D006956 5.4e-131 471.5 317 76.7
HPP92_020769 Vanilla planifolia HOM05D000834 ORTHO05D006956 9.2e-131 470.7 316 74.7
Aqoxy5G00122 Aquilegia oxysepala HOM05D000834 ORTHO05D006956 5.9e-130 468.0 315 74.0
Cpa.g.sc87.39 Carica papaya HOM05D000834 ORTHO05D006956 1.0e-129 467.2 348 70.7
ATR0787G052 Amborella trichopoda HOM05D000834 ORTHO05D006956 3.0e-129 465.7 316 76.3
Ah.08g213640 Amaranthus hybridus HOM05D000834 ORTHO05D006956 1.1e-128 463.8 281 82.2
Ciclev10020464m.g Citrus clementina HOM05D000834 ORTHO05D006956 1.1e-128 463.8 317 73.8
MBI07_g22384_MAGBIO Magnolia biondii HOM05D000834 ORTHO05D006956 3.3e-128 462.2 277 83.4
BcaB03g16828 Brassica carinata HOM05D000834 ORTHO05D006956 1.6e-127 459.9 322 73.6
Ca_09644_v3 Cicer arietinum L. HOM05D000834 ORTHO05D006956 8.9e-126 454.1 315 73.3
Os02g0816800 Oryza sativa ssp. japonica HOM05D000834 ORTHO05D006956 2.6e-125 452.6 267 84.3
CSS0005533 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 1.4e-123 446.8 374 66.8
SEGI_11456 Sequoiadendron giganteum HOM05D000834 ORTHO05D006956 1.2e-119 433.7 317 69.7
vmacro14792 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 2.6e-117 426.0 467 52.9
SalBow6G5988 Salvia bowleyana HOM05D000834 ORTHO05D006956 2.2e-116 422.9 345 65.2
Zm00001eb258880 Zea mays HOM05D000834 ORTHO05D006956 4.1e-115 418.7 243 85.6
AUR62008805 Chenopodium quinoa HOM05D000834 ORTHO05D006956 3.5e-106 389.0 227 83.7
Pp3c14_9070 Physcomitrium patens HOM05D000834 ORTHO05D006956 2.5e-96 356.3 275 59.3
AagrBONN_evm.TU.Sc2ySwM_368.182 Anthoceros agrestis HOM05D000834 ORTHO05D006956 1.3e-95 354.0 314 57.6
Dinv19263 Davidia involucrata HOM05D000834 ORTHO05D006956 1.6e-95 353.6 206 82.5
Mapoly0051s0097 Marchantia polymorpha HOM05D000834 ORTHO05D006956 1.2e-93 347.4 261 62.5
Actinidia23703 Actinidia chinensis HOM05D000834 ORTHO05D006956 3.4e-93 345.9 237 77.6
SMO119G0351 Selaginella moellendorffii HOM05D000834 ORTHO05D006956 5.8e-85 318.5 284 56.0
CBR_g12802 Chara braunii HOM05D000834 ORTHO05D006956 2.9e-84 316.2 259 57.5
Pp3c1_35920 Physcomitrium patens HOM05D000834 ORTHO05D006956 1.8e-65 253.8 204 55.9
Dinv43064 Davidia involucrata HOM05D000834 ORTHO05D006956 1.3e-63 247.7 239 58.2
MCO13G055 Micromonas commoda HOM05D000834 ORTHO05D006956 7.7e-61 238.4 318 43.4
SHI26743 Sapria himalayana HOM05D000834 ORTHO05D006956 2.6e-56 223.4 205 62.4
PRCOL_00005891 Prasinoderma coloniale HOM05D000834 ORTHO05D006956 9.7e-56 221.5 299 40.1
SEGI_20632 Sequoiadendron giganteum HOM05D000834 ORTHO05D006956 4.8e-55 219.2 171 67.8
Oeu015439.4 Olea europaea HOM05D000121 ORTHO05D000102 5.0e-52 209.1 268 48.1
Cre10.g434450 Chlamydomonas reinhardtii HOM05D000834 ORTHO05D006956 4.2e-51 206.1 261 42.5
Gohir.A13G077301 Gossypium hirsutum HOM05D000834 ORTHO05D006956 1.6e-45 187.6 99 91.9
MD15G1374200 Malus domestica HOM05D000834 ORTHO05D006956 1.0e-44 184.9 140 70.0
Gohir.A12G044900 Gossypium hirsutum HOM05D000751 ORTHO05D000889 8.0e-34 148.7 80 87.5
Gohir.A01G059200 Gossypium hirsutum HOM05D000751 ORTHO05D000889 1.4e-33 147.9 82 86.6
vmacro08769 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 1.0e-28 131.7 132 56.1
vmacro08768 Vaccinium macrocarpon HOM05D000834 ORTHO05D426596 7.3e-19 99.0 62 69.4
BcaB02g11316 Brassica carinata HOM05D000834 ORTHO05D000693 7.0e-14 82.4 57 71.9
Lsat_1_v5_gn_8_148040 Lactuca sativa HOM05D000834 ORTHO05D006956 7.3e-11 72.4 56 66.1
CiPaw.05G147100 Carya illinoinensis HOM05D000834 ORTHO05D006956 1.9e-06 57.8 42 71.4
Lsat_1_v5_gn_7_90061 Lactuca sativa HOM05D000834 ORTHO05D001119 5.4e-06 56.2 40 70.0


User provided reference genes

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