Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 2.7e-138 495.4 254 100.0
CAN.G660.2 Capsicum annuum HOM05D000045 ORTHO05D000067 6.0e-45 185.3 144 69.4
Solyc01g066625.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 6.6e-36 155.2 116 72.4
Solyc12g011027.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 6.6e-36 155.2 116 72.4
Solyc03g150148.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 8.6e-36 154.8 116 72.4
Solyc03g094125.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 1.9e-35 153.7 116 71.6
Solyc04g070995.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 1.9e-35 153.7 116 71.6
Solyc04g072045.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.5e-35 153.3 116 71.6
Solyc10g044585.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.5e-35 153.3 116 71.6
Solyc11g020215.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.5e-35 153.3 115 72.2
Solyc03g082435.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 3.3e-35 152.9 116 71.6
Solyc04g071265.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 5.6e-35 152.1 116 71.6
Solyc01g110070.3 Solanum lycopersicum HOM05D000045 ORTHO05D000067 1.6e-34 150.6 115 71.3
Solyc01g150145.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.3e-33 146.7 111 72.1
Peaxi162Scf00058g02913 Petunia axillaris HOM05D000045 ORTHO05D000067 5.8e-32 142.1 111 68.5
Peaxi162Scf00574g00711 Petunia axillaris HOM05D000045 ORTHO05D000067 7.6e-32 141.7 118 66.1
Solyc07g042610.2 Solanum lycopersicum HOM05D000045 ORTHO05D000067 9.9e-32 141.4 113 68.1
Peaxi162Scf00001g04120 Petunia axillaris HOM05D000045 ORTHO05D000067 4.3e-27 125.9 86 73.3
Peaxi162Scf00094g01123 Petunia axillaris HOM05D000045 ORTHO05D000067 1.6e-26 124.0 117 61.5
Peaxi162Scf00249g00025 Petunia axillaris HOM05D000045 ORTHO05D000611 4.0e-25 119.4 115 63.5
Peaxi162Scf00036g00419 Petunia axillaris HOM05D000045 ORTHO05D000611 9.9e-24 114.8 110 61.8
Peaxi162Scf00082g00084 Petunia axillaris HOM05D000045 ORTHO05D000067 1.2e-21 107.8 79 70.9
CAN.G637.2 Capsicum annuum HOM05D000045 ORTHO05D000067 1.0e-20 104.8 109 55.0
Peaxi162Scf00053g02317 Petunia axillaris HOM05D000045 ORTHO05D000067 1.0e-20 104.8 110 57.3
CAN.G5.41 Capsicum annuum HOM05D000001 ORTHO05D000067 8.7e-20 101.7 105 53.3
Peaxi162Scf00229g00097 Petunia axillaris HOM05D000045 ORTHO05D000067 2.0e-16 90.5 113 53.1
Peaxi162Scf00073g00232 Petunia axillaris HOM05D000045 ORTHO05D000067 7.6e-16 88.6 110 52.7
Peaxi162Scf00079g00127 Petunia axillaris HOM05D000045 ORTHO05D000067 2.2e-15 87.0 119 51.3
Peaxi162Scf00175g01033 Petunia axillaris HOM05D000045 ORTHO05D000067 1.2e-13 81.3 71 59.2
Nitab4.5_0001077g0020 Nicotiana tabacum HOM05D004542 ORTHO05D005380 7.9e-13 78.6 54 74.1
Peaxi162Scf00771g00214 Petunia axillaris HOM05D000045 ORTHO05D000067 1.8e-12 77.4 83 56.6
Peaxi162Scf00222g00329 Petunia axillaris HOM05D004542 ORTHO05D005380 1.1e-11 74.7 54 70.4
Peaxi162Scf00023g02531 Petunia axillaris HOM05D004542 ORTHO05D005380 1.9e-11 73.9 50 76.0
Nitab4.5_0000391g0330 Nicotiana tabacum HOM05D004542 ORTHO05D005380 5.6e-11 72.4 52 69.2
Nitab4.5_0013306g0010 Nicotiana tabacum HOM05D004542 ORTHO05D005380 7.4e-11 72.0 56 67.9
Peaxi162Scf00954g00114 Petunia axillaris HOM05D000045 ORTHO05D000611 9.6e-11 71.6 101 47.5
Solyc04g005590.3 Solanum lycopersicum HOM05D004542 ORTHO05D005380 9.6e-11 71.6 50 78.0
Sopen04g001630 Solanum pennellii HOM05D004542 ORTHO05D005380 9.6e-11 71.6 50 78.0
PGSC0003DMG400005564 Solanum tuberosum HOM05D004542 ORTHO05D005380 1.3e-10 71.2 53 67.9
PGSC0003DMG400002854 Solanum tuberosum HOM05D004542 ORTHO05D005380 6.2e-10 68.9 50 76.0
Nitab4.5_0000014g0150 Nicotiana tabacum HOM05D004542 ORTHO05D005380 3.1e-09 66.6 52 67.3
COL.COLO4_24493 Corchorus olitorius HOM05D000045 ORTHO05D000067 9.0e-09 65.1 170 37.1
COL.COLO4_25133 Corchorus olitorius HOM05D000045 ORTHO05D000067 9.0e-09 65.1 109 44.0
Sopen05g007930 Solanum pennellii HOM05D004542 ORTHO05D005380 2.0e-08 63.9 54 61.1
MSTRG.2336 Avicennia marina HOM05D004542 ORTHO05D005380 2.6e-08 63.5 42 71.4
COL.COLO4_19282 Corchorus olitorius HOM05D000045 ORTHO05D000067 2.6e-08 63.5 109 43.1
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 5.8e-08 62.4 33 78.8
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 7.6e-08 62.0 34 76.5
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 7.6e-08 62.0 34 79.4
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 7.6e-08 62.0 32 84.4
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 7.6e-08 62.0 32 84.4
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 7.6e-08 62.0 32 84.4
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 7.6e-08 62.0 32 84.4
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 7.6e-08 62.0 32 84.4
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 7.6e-08 62.0 32 84.4
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 7.6e-08 62.0 32 84.4
Solyc05g013190.4 Solanum lycopersicum HOM05D004542 ORTHO05D005380 1.3e-07 61.2 53 60.4
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 1.7e-07 60.8 32 81.2
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 3.8e-07 59.7 33 72.7
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 3.8e-07 59.7 32 75.0
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 6.4e-07 58.9 34 67.6
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 8.4e-07 58.5 32 75.0
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 8.4e-07 58.5 32 75.0
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 1.1e-06 58.2 34 70.6
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 1.1e-06 58.2 32 78.1
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 1.4e-06 57.8 32 71.9
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 1.4e-06 57.8 32 71.9
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.9e-06 57.4 32 68.8
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.9e-06 57.4 32 68.8
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 1.9e-06 57.4 34 70.6
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 2.4e-06 57.0 34 70.6
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 2.4e-06 57.0 32 71.9
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 2.4e-06 57.0 32 75.0
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 2.4e-06 57.0 32 68.8
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 3.2e-06 56.6 32 71.9
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.2e-06 56.6 32 71.9
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.2e-06 56.6 32 71.9
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 3.2e-06 56.6 32 71.9
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 4.2e-06 56.2 32 68.8
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 4.2e-06 56.2 32 78.1
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 4.2e-06 56.2 32 71.9
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 4.2e-06 56.2 32 75.0
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 5.5e-06 55.8 32 71.9
Dinv07945 Davidia involucrata HOM05D004542 ORTHO05D005380 5.5e-06 55.8 53 58.5
Oeu001710.1 Olea europaea HOM05D004542 ORTHO05D005380 5.5e-06 55.8 50 56.0
Psat0s1369g0240 Pisum sativum HOM05D000045 ORTHO05D000067 5.5e-06 55.8 99 40.4
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 7.1e-06 55.5 32 68.8
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 7.1e-06 55.5 32 71.9
Psat0s13189g0040 Pisum sativum HOM05D000045 ORTHO05D000067 7.1e-06 55.5 99 40.4
Psat1g061560 Pisum sativum HOM05D000045 ORTHO05D000067 7.1e-06 55.5 99 40.4
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 7.1e-06 55.5 32 68.8
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 9.3e-06 55.1 32 68.8


User provided reference genes

Program Settings