Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G534.6 Capsicum annuum HOM05D009059 ORTHO05D011207 5.4e-56 220.7 108 100.0
CAN.G1610.5 Capsicum annuum HOM05D009059 ORTHO05D011207 5.3e-43 177.6 104 83.7
CAN.G584.64 Capsicum annuum HOM05D009059 ORTHO05D011207 1.2e-42 176.4 105 81.9
CAN.G584.65 Capsicum annuum HOM05D009059 ORTHO05D011207 1.7e-41 172.6 104 81.7
CAN.G584.67 Capsicum annuum HOM05D009059 ORTHO05D011207 1.9e-40 169.1 104 79.8
CAN.G1084.27 Capsicum annuum HOM05D009059 ORTHO05D011207 2.5e-40 168.7 104 78.8
CAN.G1610.6 Capsicum annuum HOM05D009059 ORTHO05D011207 1.5e-34 149.4 83 83.1
CAN.G3387.1 Capsicum annuum HOM05D009059 ORTHO05D011207 1.3e-33 146.4 82 82.9
CAN.G1084.28 Capsicum annuum HOM05D009059 ORTHO05D011207 4.2e-32 141.4 86 75.6
CAN.G1084.24 Capsicum annuum HOM05D009059 ORTHO05D011207 9.3e-32 140.2 105 64.8
CAN.G584.62 Capsicum annuum HOM05D009059 ORTHO05D011207 8.8e-30 133.7 105 65.7
Solyc07g006380.3 Solanum lycopersicum HOM05D009059 ORTHO05D011207 2.4e-27 125.6 105 63.8
Solyc11g028070.2 Solanum lycopersicum HOM05D009059 ORTHO05D011207 3.1e-27 125.2 105 61.9
Sopen11g012530 Solanum pennellii HOM05D009059 ORTHO05D011207 3.1e-27 125.2 105 61.9
Sopen07g002470 Solanum pennellii HOM05D009059 ORTHO05D011207 4.5e-26 121.3 105 61.9
Solyc11g028040.2 Solanum lycopersicum HOM05D009059 ORTHO05D011207 6.5e-25 117.5 105 60.0
CAN.G1084.29 Capsicum annuum HOM05D009059 ORTHO05D011207 1.1e-24 116.7 65 78.5
CAN.G584.63 Capsicum annuum HOM05D009059 ORTHO05D011207 1.1e-24 116.7 98 61.2
Solyc07g150108.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 4.2e-24 114.8 86 67.4
Solyc07g016095.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 2.1e-23 112.5 86 66.3
Nitab4.5_0005347g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.8e-22 109.4 106 58.5
Nitab4.5_0001626g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 4.4e-21 104.8 106 56.6
Nitab4.5_0001626g0020 Nicotiana tabacum HOM05D009059 ORTHO05D011207 4.4e-21 104.8 106 56.6
Nitab4.5_0005404g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 2.8e-20 102.1 106 54.7
Nitab4.5_0003765g0030 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.8e-19 99.4 106 52.8
Nitab4.5_0003165g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.7e-17 92.8 106 52.8
Nitab4.5_0001882g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 5.0e-17 91.3 106 49.1
CAN.G5797.1 Capsicum annuum HOM05D009059 ORTHO05D011207 2.8e-12 75.5 58 60.3
Nitab4.5_0001882g0020 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.4e-11 73.2 84 47.6
Peaxi162Scf00297g00816 Petunia axillaris HOM05D009059 ORTHO05D011207 1.8e-11 72.8 101 39.6
Peaxi162Scf00297g00815 Petunia axillaris HOM05D009059 ORTHO05D011207 7.0e-11 70.9 103 39.8
Solyc07g016120.3 Solanum lycopersicum HOM05D009059 ORTHO05D011207 1.6e-10 69.7 61 60.7
Sopen07g005870 Solanum pennellii HOM05D000082 ORTHO05D000038 5.9e-10 67.8 59 61.0
Peaxi162Scf00005g00041 Petunia axillaris HOM05D009059 ORTHO05D011207 5.0e-09 64.7 102 37.3
Solyc07g016113.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 5.5e-08 61.2 107 39.3
Gorai.002G043900 Gossypium raimondii HOM05D001231 ORTHO05D001012 7.2e-08 60.8 76 39.5
Gorai.002G044100 Gossypium raimondii HOM05D001231 ORTHO05D001012 7.2e-08 60.8 76 39.5
Gohir.D01G035800 Gossypium hirsutum HOM05D001231 ORTHO05D001012 1.2e-07 60.1 76 39.5
PSO675G5343 Papaver somniferum HOM05D001231 ORTHO05D001012 1.2e-07 60.1 75 37.3
Solyc11g028060.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 1.2e-07 60.1 43 65.1
PGSC0003DMG400015132 Solanum tuberosum HOM05D001231 ORTHO05D001012 1.2e-07 60.1 75 37.3
Peaxi162Scf00005g00035 Petunia axillaris HOM05D009059 ORTHO05D011207 2.7e-07 58.9 76 42.1
PGSC0003DMG400015133 Solanum tuberosum HOM05D001231 ORTHO05D001012 3.6e-07 58.5 46 52.2
CAN.G976.4 Capsicum annuum HOM05D001231 ORTHO05D001012 4.7e-07 58.2 80 38.8
CDE04G2371 Ceratophyllum demersum HOM05D001231 ORTHO05D001012 4.7e-07 58.2 69 37.7
Gohir.D01G036000 Gossypium hirsutum HOM05D001231 ORTHO05D001012 4.7e-07 58.2 76 38.2
Duzib248G1477 Durio zibethinus HOM05D001231 ORTHO05D001012 6.1e-07 57.8 77 37.7
Sed0017845 Sechium edule HOM05D001231 ORTHO05D001012 6.1e-07 57.8 68 36.8
Sp2g13550 Schrenkiella parvula HOM05D001231 ORTHO05D001012 8.0e-07 57.4 72 34.7
AT2G02147 Arabidopsis thaliana HOM05D001231 ORTHO05D001012 1.4e-06 56.6 73 39.7
CDE07G0627 Ceratophyllum demersum HOM05D001231 ORTHO05D001012 1.4e-06 56.6 70 35.7
Gohir.D01G035900 Gossypium hirsutum HOM05D001231 ORTHO05D001012 1.4e-06 56.6 74 32.4
Psat4g112240 Pisum sativum HOM05D001231 ORTHO05D001012 1.4e-06 56.6 77 36.4
AL5G11400 Arabidopsis lyrata HOM05D001231 ORTHO05D001012 1.8e-06 56.2 73 38.4
Phvul.002G278500 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 1.8e-06 56.2 69 42.0
AL8G14820 Arabidopsis lyrata HOM05D001231 ORTHO05D001012 2.3e-06 55.8 72 40.3
FvH4_3g14460 Fragaria vesca HOM05D020793 ORTHO05D025367 2.3e-06 55.8 67 38.8
Gohir.A01G045100 Gossypium hirsutum HOM05D001231 ORTHO05D001012 2.3e-06 55.8 74 31.1
Gohir.D01G036100 Gossypium hirsutum HOM05D001231 ORTHO05D001012 2.3e-06 55.8 74 32.4
Os02g0172000 Oryza sativa ssp. japonica HOM05D001231 ORTHO05D001012 2.3e-06 55.8 55 41.8
Carub.0005s0120 Capsella rubella HOM05D001231 ORTHO05D001012 3.0e-06 55.5 74 36.5
Gohir.A01G045200 Gossypium hirsutum HOM05D001231 ORTHO05D001012 3.0e-06 55.5 63 42.9
Gorai.002G044000 Gossypium raimondii HOM05D001231 ORTHO05D001012 3.0e-06 55.5 65 40.0
Gorai.002G044200 Gossypium raimondii HOM05D001231 ORTHO05D001012 3.0e-06 55.5 74 32.4
MD16G1008900 Malus domestica HOM05D001231 ORTHO05D001012 3.0e-06 55.5 80 35.0
Carub.0005s0116 Capsella rubella HOM05D001231 ORTHO05D001012 4.0e-06 55.1 78 34.6
Lalb_Chr16g0392501 Lupinus albus HOM05D001231 ORTHO05D001012 4.0e-06 55.1 46 45.7
AT2G31953 Arabidopsis thaliana HOM05D001231 ORTHO05D001012 5.2e-06 54.7 87 36.8
MELO3C005215.2 Cucumis melo HOM05D001231 ORTHO05D001012 5.2e-06 54.7 73 34.2
Lalb_Chr05g0229081 Lupinus albus HOM05D001231 ORTHO05D001012 5.2e-06 54.7 79 36.7
Aa31LG5G3920 Aethionema arabicum HOM05D001231 ORTHO05D001012 6.7e-06 54.3 82 37.8
AL4G27280 Arabidopsis lyrata HOM05D001231 ORTHO05D001012 6.7e-06 54.3 80 38.8
AL80U10050 Arabidopsis lyrata HOM05D001231 ORTHO05D001012 6.7e-06 54.3 80 38.8
DCAR_026846 Daucus carota HOM05D001231 ORTHO05D001012 6.7e-06 54.3 49 44.9
Nn7g38190 Nelumbo nucifera HOM05D001231 ORTHO05D001012 6.7e-06 54.3 69 34.8


User provided reference genes

Program Settings