Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G532.73 Capsicum annuum HOM05D001976 ORTHO05D001960 1.3e-143 513.5 356 100.0
Sopen08g030010 Solanum pennellii HOM05D001976 ORTHO05D001960 1.8e-68 263.8 350 56.6
Nitab4.5_0000966g0060 Nicotiana tabacum HOM05D001976 ORTHO05D001960 3.2e-68 263.1 335 55.5
Solyc08g081710.3 Solanum lycopersicum HOM05D001976 ORTHO05D001960 1.2e-67 261.2 350 58.9
Nitab4.5_0009262g0010 Nicotiana tabacum HOM05D001976 ORTHO05D001960 5.9e-67 258.8 330 58.5
PGSC0003DMG400012175 Solanum tuberosum HOM05D001976 ORTHO05D001960 6.4e-61 238.8 346 55.2
Peaxi162Scf00074g01625 Petunia axillaris HOM05D001976 ORTHO05D001960 6.4e-53 212.2 331 48.0
Dinv37579 Davidia involucrata HOM05D001976 ORTHO05D001960 1.9e-44 184.1 337 46.9
Manes.02G015825 Manihot esculenta HOM05D001976 ORTHO05D001960 2.3e-42 177.2 329 46.2
CSS0015961 Camellia sinensis var. sinensis HOM05D001976 ORTHO05D001960 1.1e-39 168.3 322 46.3
Cfa012260 Carpinus fangiana HOM05D001976 ORTHO05D001960 5.2e-39 166.0 334 50.0
MD06G1094800 Malus domestica HOM05D001976 ORTHO05D001960 1.2e-38 164.9 352 43.8
Sabra01G0073300 Salix brachista HOM05D001976 ORTHO05D001960 1.2e-38 164.9 332 45.5
Haze_08732 Corylus avellana HOM05D001976 ORTHO05D001960 1.5e-38 164.5 335 49.6
Oeu011796.1 Olea europaea HOM05D001976 ORTHO05D001960 9.9e-38 161.8 321 42.1
CSS0011463 Camellia sinensis var. sinensis HOM05D001976 ORTHO05D001960 1.7e-37 161.0 322 49.4
Cpa.g.sc122.6 Carica papaya HOM05D001976 ORTHO05D001960 1.7e-37 161.0 330 40.0
Hma1.2p1_0216F.1_g091200 Hydrangea macrophylla HOM05D001976 ORTHO05D001960 8.4e-37 158.7 347 45.8
Sabra03G0095800 Salix brachista HOM05D001976 ORTHO05D001960 2.7e-35 153.7 331 45.3
Potri.003G133500 Populus trichocarpa HOM05D001976 ORTHO05D001960 3.5e-35 153.3 332 43.1
TWI81G0614 Tripterygium wilfordii HOM05D001976 ORTHO05D001960 3.5e-35 153.3 335 47.2
Potri.001G098000 Populus trichocarpa HOM05D001976 ORTHO05D001960 6.0e-35 152.5 341 44.9
Cc08_g15410 Coffea canephora HOM05D001976 ORTHO05D001960 1.3e-34 151.4 339 38.6
CiPaw.11G127900 Carya illinoinensis HOM05D001976 ORTHO05D001960 1.7e-34 151.0 335 48.1
Prupe.5G110000 Prunus persica HOM05D001976 ORTHO05D001960 1.7e-34 151.0 354 44.6
TAR636G0380 Trochodendron aralioides HOM05D001976 ORTHO05D001960 2.3e-34 150.6 324 42.6
RcHm_v2.0_Chr7g0196191 Rosa chinensis HOM05D001976 ORTHO05D001960 3.9e-34 149.8 340 48.5
Actinidia10617 Actinidia chinensis HOM05D001976 ORTHO05D001960 5.1e-34 149.4 323 46.7
MSTRG.25640 Avicennia marina HOM05D001976 ORTHO05D001960 1.9e-33 147.5 358 36.6
Ciclev10020100m.g Citrus clementina HOM05D001976 ORTHO05D001960 1.9e-33 147.5 349 41.0
Phvul.002G160900 Phaseolus vulgaris HOM05D001976 ORTHO05D001960 5.6e-33 146.0 323 45.2
TAR629G3496 Trochodendron aralioides HOM05D001976 ORTHO05D001960 5.6e-33 146.0 330 43.6
DCAR_000639 Daucus carota HOM05D001976 ORTHO05D001960 7.3e-33 145.6 330 41.8
arahy.Tifrunner.gnm1.ann1.9LN53N Arachis hypogaea HOM05D001976 ORTHO05D001960 9.6e-33 145.2 365 42.7
MSTRG.11949 Avicennia marina HOM05D001976 ORTHO05D001960 2.1e-32 144.1 349 41.8
FAN13G2994 Fragaria x ananassa HOM05D001976 ORTHO05D001960 3.6e-32 143.3 325 40.0
QL02p032753 Quercus lobata HOM05D001976 ORTHO05D001960 3.6e-32 143.3 353 45.3
Actinidia28333 Actinidia chinensis HOM05D001976 ORTHO05D001960 6.2e-32 142.5 308 40.3
MBI07_g11737_MAGBIO Magnolia biondii HOM05D001976 ORTHO05D001960 8.1e-32 142.1 323 43.7
Nn1g01713 Nelumbo nucifera HOM05D001976 ORTHO05D001960 8.1e-32 142.1 331 41.7
arahy.Tifrunner.gnm1.ann1.EII57S Arachis hypogaea HOM05D001976 ORTHO05D001960 1.1e-31 141.7 370 42.7
COL.COLO4_08340 Corchorus olitorius HOM05D001976 ORTHO05D001960 1.4e-31 141.4 344 47.1
FAN04G0634 Fragaria x ananassa HOM05D001976 ORTHO05D001960 2.4e-31 140.6 325 39.7
FAN04G1876 Fragaria x ananassa HOM05D001976 ORTHO05D001960 3.1e-31 140.2 328 39.9
Gohir.A12G232900 Gossypium hirsutum HOM05D001976 ORTHO05D001960 3.1e-31 140.2 347 44.7
Nn7g37309 Nelumbo nucifera HOM05D001976 ORTHO05D001960 5.3e-31 139.4 351 45.3
Actinidia27357 Actinidia chinensis HOM05D001976 ORTHO05D001960 9.0e-31 138.7 320 38.4
MD14G1115100 Malus domestica HOM05D001976 ORTHO05D001960 1.5e-30 137.9 353 42.5
Gohir.D12G234501 Gossypium hirsutum HOM05D001976 ORTHO05D001960 3.4e-30 136.7 336 42.9
VMungo1215G0216 Vigna mungo HOM05D001976 ORTHO05D001960 4.5e-30 136.3 328 46.3
Atru.chr9.2097 Acer truncatum HOM05D001976 ORTHO05D001960 5.8e-30 136.0 360 44.7
Glyma.11G020400 Glycine max HOM05D001976 ORTHO05D001960 5.8e-30 136.0 324 44.4
Duzib084G0318 Durio zibethinus HOM05D001976 ORTHO05D001960 7.6e-30 135.6 334 43.4
FAN08G2781 Fragaria x ananassa HOM05D001976 ORTHO05D001960 9.9e-30 135.2 325 39.4
Duzib068G0824 Durio zibethinus HOM05D001976 ORTHO05D001960 1.3e-29 134.8 325 43.4
Glyma.01G223000 Glycine max HOM05D001976 ORTHO05D001960 1.7e-29 134.4 323 45.5
Thecc.03G288300 Theobroma cacao HOM05D001976 ORTHO05D001960 1.7e-29 134.4 345 43.8
Gorai.008G250800 Gossypium raimondii HOM05D001976 ORTHO05D001960 2.2e-29 134.0 347 45.5
CDE10G1305 Ceratophyllum demersum HOM05D001976 ORTHO05D001960 6.4e-29 132.5 320 35.9
Lj4g0026616 Lotus japonicus HOM05D001976 ORTHO05D001960 1.4e-28 131.3 326 42.6
vmacro11415 Vaccinium macrocarpon HOM05D001976 ORTHO05D001960 1.9e-28 131.0 329 41.9
FAN18G1918 Fragaria x ananassa HOM05D001976 ORTHO05D001960 5.4e-28 129.4 325 42.8
Sed0000465 Sechium edule HOM05D001976 ORTHO05D001960 7.1e-28 129.0 327 40.7
FAN13G0870 Fragaria x ananassa HOM05D001976 ORTHO05D001960 1.2e-27 128.3 320 40.3
Lsat_1_v5_gn_6_9901 Lactuca sativa HOM05D001976 ORTHO05D001960 2.1e-27 127.5 328 41.8
FvH4_5g03470 Fragaria vesca HOM05D001976 ORTHO05D001960 2.7e-27 127.1 325 42.2
CDE04G1018 Ceratophyllum demersum HOM05D001976 ORTHO05D001960 6.0e-27 125.9 325 34.2
FAN18G1913 Fragaria x ananassa HOM05D001976 ORTHO05D001960 1.3e-26 124.8 328 42.7
SalBow1G7906 Salvia bowleyana HOM05D001976 ORTHO05D001960 1.8e-26 124.4 338 43.2
CsaV3_4G006180 Cucumis sativus L. HOM05D001976 ORTHO05D001960 2.3e-26 124.0 339 44.8
Duzib205G1380 Durio zibethinus HOM05D001976 ORTHO05D001960 3.0e-26 123.6 336 43.8
Medtr5g009870 Medicago truncatula HOM05D001976 ORTHO05D001960 8.7e-26 122.1 335 41.2
Ca_24532_v3 Cicer arietinum L. HOM05D001976 ORTHO05D001960 9.6e-25 118.6 330 37.9
TAR374G0991 Trochodendron aralioides HOM05D001976 ORTHO05D001960 2.1e-24 117.5 324 39.2
MELO3C016332.2 Cucumis melo HOM05D001976 ORTHO05D001960 3.6e-24 116.7 343 44.6
ClCG07G007760 Citrullus lanatus HOM05D001976 ORTHO05D001960 6.2e-24 115.9 332 40.4
Aa31LG2G1150 Aethionema arabicum HOM05D001976 ORTHO05D001960 8.1e-24 115.5 368 35.1
TPR.G6642 Trifolium pratense HOM05D001976 ORTHO05D001960 1.1e-23 115.2 270 43.7
Psat2g184040 Pisum sativum HOM05D001976 ORTHO05D001960 1.8e-23 114.4 320 44.4
CANSAT21G2063 Cannabis sativa HOM05D001976 ORTHO05D001960 2.4e-23 114.0 368 38.3
THA.LOC104809359 Tarenaya hassleriana HOM05D001976 ORTHO05D001960 6.9e-23 112.5 342 36.0
Rhsim02G0236700 Rhododendron simsii HOM05D001976 ORTHO05D001960 3.4e-22 110.2 345 41.2
GSVIVG01019432001 Vitis vinifera HOM05D001976 ORTHO05D001960 5.8e-22 109.4 226 40.7
Eucgr.D01802 Eucalyptus grandis HOM05D001976 ORTHO05D001960 6.4e-21 105.9 344 43.0
ATR1131G006 Amborella trichopoda HOM05D001976 ORTHO05D001960 1.1e-20 105.1 326 37.4
LjContig00312_ERROPOS870357g0013732 Lotus japonicus HOM05D001976 ORTHO05D001960 4.2e-20 103.2 329 44.4
SGA_v2.0_scaffold173G39126 Striga asiatica HOM05D001976 ORTHO05D001960 9.3e-20 102.1 224 38.4
Sc01g0009940 Simmondsia chinensis HOM05D001976 ORTHO05D001960 1.2e-19 101.7 328 42.1
ECA233G5343 Erigeron canadensis HOM05D001976 ORTHO05D001960 2.7e-19 100.5 232 39.7
Sp2g00630 Schrenkiella parvula HOM05D001976 ORTHO05D001960 3.5e-19 100.1 341 31.7
Sed0014014 Sechium edule HOM05D001976 ORTHO05D001960 6.0e-19 99.4 342 39.8
CARHR046860 Cardamine hirsuta HOM05D001976 ORTHO05D001960 5.1e-18 96.3 333 34.8
CSS0020510 Camellia sinensis var. sinensis HOM05D001976 ORTHO05D001960 1.1e-17 95.1 323 40.2
TPR.G3429 Trifolium pratense HOM05D001976 ORTHO05D001960 1.1e-17 95.1 322 32.9
Lalb_Chr05g0224421 Lupinus albus HOM05D001976 ORTHO05D001960 1.9e-17 94.4 324 38.3
Dinv35286 Davidia involucrata HOM05D001976 ORTHO05D001960 3.3e-17 93.6 320 31.6
AT1G64080 Arabidopsis thaliana HOM05D001976 ORTHO05D001960 7.4e-17 92.4 342 31.0
Migut.A00710 Erythranthe guttata HOM05D001976 ORTHO05D001960 2.1e-16 90.9 319 34.8
AL2G10980 Arabidopsis lyrata HOM05D001976 ORTHO05D001960 2.8e-16 90.5 332 30.7
Gohir.D03G079300 Gossypium hirsutum HOM05D001976 ORTHO05D001960 2.8e-16 90.5 320 33.1
Gorai.003G084800 Gossypium raimondii HOM05D001976 ORTHO05D001960 2.8e-16 90.5 320 33.1
HanXRQChr02g0046321 Helianthus annuus HOM05D001976 ORTHO05D001960 6.2e-16 89.4 330 27.6
Gohir.A02G104500 Gossypium hirsutum HOM05D001976 ORTHO05D001960 8.1e-16 89.0 321 34.3
EL10Ac5g12847 Beta vulgaris HOM05D001976 ORTHO05D001960 1.1e-15 88.6 323 34.7
HanXRQChr07g0188691 Helianthus annuus HOM05D001976 ORTHO05D001960 1.1e-15 88.6 343 37.0
HPP92_019991 Vanilla planifolia HOM05D001976 ORTHO05D001960 1.1e-15 88.6 203 37.9
Manes.14G121828 Manihot esculenta HOM05D001976 ORTHO05D001960 1.4e-15 88.2 129 46.5
BcaB07g31432 Brassica carinata HOM05D001976 ORTHO05D001960 1.8e-15 87.8 330 32.7
PSO384G4698 Papaver somniferum HOM05D001976 ORTHO05D001960 3.1e-15 87.0 347 30.5
Dinv28365 Davidia involucrata HOM05D001976 ORTHO05D001960 6.9e-15 85.9 323 31.3
BcaC04g22529 Brassica carinata HOM05D001976 ORTHO05D001960 1.5e-14 84.7 340 32.6
C09p18180 Brassica napus HOM05D001976 ORTHO05D001960 1.5e-14 84.7 340 32.6
Medtr8g099045 Medicago truncatula HOM05D001976 ORTHO05D001960 1.5e-14 84.7 294 31.6
BolC9t54714H Brassica oleracea HOM05D001976 ORTHO05D001960 2.6e-14 84.0 340 32.4
Phvul.002G293900 Phaseolus vulgaris HOM05D001976 ORTHO05D001960 5.8e-14 82.8 214 40.2
Haze_00075 Corylus avellana HOM05D001976 ORTHO05D001960 1.3e-13 81.6 322 30.4
Thhalv10023416m.g Eutrema salsugineum HOM05D001976 ORTHO05D001960 1.3e-13 81.6 326 32.5
A09p15010 Brassica napus HOM05D001976 ORTHO05D001960 2.9e-13 80.5 336 33.9
BraA09t37146Z Brassica rapa HOM05D001976 ORTHO05D001960 2.9e-13 80.5 336 33.9
VMungo0251G3446 Vigna mungo HOM05D001976 ORTHO05D001960 3.8e-13 80.1 215 36.3
Hund14258 Selenicereus undatus HOM05D001976 ORTHO05D001960 4.9e-13 79.7 336 35.1
Ah.12g052060 Amaranthus hybridus HOM05D001976 ORTHO05D001960 2.5e-12 77.4 317 35.3
PSO135G0786 Papaver somniferum HOM05D001976 ORTHO05D001960 9.3e-12 75.5 346 31.8
Cfa017241 Carpinus fangiana HOM05D001976 ORTHO05D001960 2.7e-11 73.9 124 52.4
Ca_10957_v3 Cicer arietinum L. HOM05D001976 ORTHO05D001960 4.6e-11 73.2 186 40.9
THA.LOC104824545 Tarenaya hassleriana HOM05D001976 ORTHO05D001960 4.6e-11 73.2 295 33.2
Cfa016322 Carpinus fangiana HOM05D001976 ORTHO05D001960 7.9e-11 72.4 323 26.9
MBI06_g33542_MAGBIO Magnolia biondii HOM05D001976 ORTHO05D000747 3.0e-10 70.5 268 32.8
HPP92_023941 Vanilla planifolia HOM05D001976 ORTHO05D001960 3.0e-10 70.5 315 33.0
HPP92_023963 Vanilla planifolia HOM05D001976 ORTHO05D001960 3.0e-10 70.5 315 33.0
QL09p012141 Quercus lobata HOM05D001976 ORTHO05D001960 3.9e-10 70.1 209 34.4
Potri.015G027500 Populus trichocarpa HOM05D001976 ORTHO05D001960 5.1e-10 69.7 320 30.0
SEGI_24344 Sequoiadendron giganteum HOM05D001976 ORTHO05D001960 6.7e-10 69.3 282 27.7
Ah.07g196780 Amaranthus hybridus HOM05D001976 ORTHO05D001960 8.7e-10 68.9 248 31.0
Psat7g028840 Pisum sativum HOM05D001976 ORTHO05D001960 1.5e-09 68.2 180 35.0
CiPaw.05G260400 Carya illinoinensis HOM05D001976 ORTHO05D001960 1.9e-09 67.8 233 30.5
Carub.0002s0071 Capsella rubella HOM05D001976 ORTHO05D001960 7.4e-09 65.9 347 34.3
unitig_46.g18541 Utricularia gibba HOM05D001976 ORTHO05D001960 7.4e-09 65.9 316 26.9
Manes.14G020600 Manihot esculenta HOM05D001976 ORTHO05D001960 1.3e-08 65.1 202 32.7
Ciclev10005237m.g Citrus clementina HOM05D001976 ORTHO05D001960 2.8e-08 63.9 195 37.4
Lalb_Chr16g0377001 Lupinus albus HOM05D001976 ORTHO05D001960 2.8e-08 63.9 320 28.1
Manes.06G154200 Manihot esculenta HOM05D001976 ORTHO05D001960 2.8e-08 63.9 220 30.9
PSO063G2954 Papaver somniferum HOM05D001976 ORTHO05D001960 2.8e-08 63.9 322 30.1
Potri.012G035700 Populus trichocarpa HOM05D001976 ORTHO05D001960 2.8e-08 63.9 323 25.7
Zm00001eb339040 Zea mays HOM05D001976 ORTHO05D001960 4.8e-08 63.2 324 28.7
Sabra12G0024400 Salix brachista HOM05D001976 ORTHO05D001960 6.3e-08 62.8 324 26.9
Os01g0226200 Oryza sativa ssp. japonica HOM05D001976 ORTHO05D001960 8.2e-08 62.4 167 30.5
Sabra15G0022800 Salix brachista HOM05D001976 ORTHO05D001960 8.2e-08 62.4 321 25.5
TWI23G0128 Tripterygium wilfordii HOM05D001976 ORTHO05D001960 8.2e-08 62.4 326 28.5
arahy.Tifrunner.gnm1.ann1.0FHV4T Arachis hypogaea HOM05D001976 ORTHO05D001960 1.4e-07 61.6 313 35.1
arahy.Tifrunner.gnm1.ann1.VA5QG3 Arachis hypogaea HOM05D001976 ORTHO05D001960 1.8e-07 61.2 313 33.9
Zm00001eb119470 Zea mays HOM05D001976 ORTHO05D001960 6.9e-07 59.3 167 39.5
Glyma.05G212700 Glycine max HOM05D001976 ORTHO05D001960 9.0e-07 58.9 193 33.2
CSS0004562 Camellia sinensis var. sinensis HOM05D001976 ORTHO05D001960 1.2e-06 58.5 220 31.4
SEGI_29628 Sequoiadendron giganteum HOM05D001976 ORTHO05D001960 1.5e-06 58.2 240 27.1
Thecc.03G187800 Theobroma cacao HOM05D001976 ORTHO05D001960 2.0e-06 57.8 202 31.7
CANSAT21G0977 Cannabis sativa HOM05D001976 ORTHO05D001960 4.5e-06 56.6 204 30.9
Hma1.2p1_0327F.1_g126540 Hydrangea macrophylla HOM05D001976 ORTHO05D001960 4.5e-06 56.6 166 33.7
Duzib084G1151 Durio zibethinus HOM05D001976 ORTHO05D001960 5.9e-06 56.2 199 32.2
TWI14G1073 Tripterygium wilfordii HOM05D001976 ORTHO05D001960 1.0e-05 55.5 204 29.4


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