Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G532.47 Capsicum annuum HOM05D006693 ORTHO05D008092 2.5e-52 208.4 98 100.0
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 1.3e-43 179.5 89 93.3
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 5.5e-39 164.1 89 83.1
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 2.9e-32 141.7 89 67.4
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 5.0e-32 141.0 70 91.4
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 3.2e-31 138.3 89 64.0
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 3.6e-30 134.8 89 68.5
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 4.7e-30 134.4 89 66.3
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 1.0e-29 133.3 89 61.8
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 2.3e-29 132.1 89 61.8
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 5.1e-29 131.0 89 66.3
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 8.8e-29 130.2 89 64.0
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 1.5e-28 129.4 89 61.8
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 2.0e-28 129.0 89 62.9
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 2.0e-28 129.0 89 62.9
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 2.6e-28 128.6 89 62.9
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 3.3e-28 128.3 90 64.4
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 9.7e-28 126.7 89 64.0
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 1.3e-27 126.3 89 61.8
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 3.7e-27 124.8 89 62.9
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 4.8e-27 124.4 89 60.7
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 1.1e-26 123.2 89 58.4
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 1.1e-26 123.2 89 59.6
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 1.4e-26 122.9 89 59.6
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 2.4e-26 122.1 88 62.5
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 2.4e-26 122.1 88 62.5
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 4.1e-26 121.3 89 62.9
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 4.1e-26 121.3 88 62.5
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 7.0e-26 120.6 89 59.6
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 9.1e-26 120.2 89 59.6
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 1.2e-25 119.8 89 62.9
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 1.5e-25 119.4 89 57.3
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 2.6e-25 118.6 89 61.8
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 2.6e-25 118.6 89 58.4
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 5.9e-25 117.5 89 60.7
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 5.9e-25 117.5 88 60.2
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 5.9e-25 117.5 90 60.0
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 7.7e-25 117.1 89 57.3
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 1.0e-24 116.7 94 59.6
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 1.3e-24 116.3 89 57.3
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 1.7e-24 115.9 89 56.2
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 1.7e-24 115.9 89 56.2
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 2.2e-24 115.5 90 58.9
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 2.9e-24 115.2 89 60.7
COL.COLO4_08357 Corchorus olitorius HOM05D006693 ORTHO05D008092 3.8e-24 114.8 88 58.0
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 3.8e-24 114.8 89 57.3
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 5.0e-24 114.4 89 59.6
FAN08G3186 Fragaria x ananassa HOM05D006693 ORTHO05D008092 5.0e-24 114.4 89 59.6
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 6.5e-24 114.0 89 58.4
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 6.5e-24 114.0 89 58.4
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 6.5e-24 114.0 89 58.4
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 6.5e-24 114.0 89 58.4
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 1.1e-23 113.2 89 59.6
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 1.1e-23 113.2 89 58.4
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 1.1e-23 113.2 89 57.3
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 1.5e-23 112.8 89 58.4
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 1.9e-23 112.5 89 58.4
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.9e-23 112.5 89 58.4
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.9e-23 112.5 89 58.4
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.9e-23 112.5 89 58.4
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 2.5e-23 112.1 89 57.3
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 2.5e-23 112.1 89 57.3
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 2.5e-23 112.1 93 55.9
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 2.5e-23 112.1 89 56.2
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 2.5e-23 112.1 89 55.1
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 3.2e-23 111.7 92 57.6
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 7.2e-23 110.5 93 54.8
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 9.4e-23 110.2 90 55.6
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 1.2e-22 109.8 90 57.8
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 1.6e-22 109.4 89 57.3
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 1.6e-22 109.4 89 53.9
CARHR255320 Cardamine hirsuta HOM05D006693 ORTHO05D008092 1.6e-22 109.4 93 54.8
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 2.1e-22 109.0 89 55.1
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 1.8e-21 105.9 90 58.9
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 1.1e-20 103.2 89 53.9
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 2.6e-20 102.1 89 55.1
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 2.6e-20 102.1 89 53.9
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 5.7e-20 100.9 89 51.7
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 7.4e-20 100.5 91 50.5
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 7.4e-20 100.5 89 51.7
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 1.7e-19 99.4 91 51.6
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 1.7e-19 99.4 89 51.7
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 2.2e-19 99.0 89 49.4
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 2.2e-19 99.0 89 49.4
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 2.8e-19 98.6 101 49.5
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 3.7e-19 98.2 89 52.8
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 3.7e-19 98.2 89 50.6
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 4.8e-19 97.8 89 47.2
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 1.1e-18 96.7 89 50.6
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 2.6e-17 92.0 89 48.3
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 3.5e-17 91.7 104 46.2
SEGI_07995 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 3.6e-14 81.6 89 47.2
SEGI_35152 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 3.6e-14 81.6 89 47.2
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 1.7e-11 72.8 96 37.5
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 4.8e-11 71.2 83 39.8
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 3.1e-10 68.6 55 69.1
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 1.6e-06 56.2 89 30.3


User provided reference genes

Program Settings