Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 3.5e-119 431.8 240 100.0
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 8.8e-107 390.6 210 90.0
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 5.7e-106 387.9 210 89.5
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.2e-90 337.0 176 93.2
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 4.4e-90 335.1 208 82.2
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 6.6e-86 321.2 208 75.5
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 8.6e-86 320.9 204 75.0
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 3.3e-85 318.9 204 76.0
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 5.6e-85 318.2 207 74.4
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 9.5e-85 317.4 202 77.2
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 9.5e-85 317.4 205 75.6
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 4.7e-84 315.1 198 77.3
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 4.7e-84 315.1 202 76.2
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 4.7e-84 315.1 206 73.8
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 4.7e-84 315.1 198 78.8
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 6.2e-84 314.7 204 77.9
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 6.2e-84 314.7 203 75.9
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 4.0e-83 312.0 198 75.8
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 5.2e-83 311.6 208 71.6
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 5.2e-83 311.6 205 73.2
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 6.8e-83 311.2 207 73.4
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 1.5e-82 310.1 197 75.6
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 1.5e-82 310.1 202 75.7
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 2.0e-82 309.7 202 75.2
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 2.6e-82 309.3 202 73.8
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 4.4e-82 308.5 194 76.8
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 5.8e-82 308.1 204 75.0
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 5.8e-82 308.1 204 75.5
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 5.8e-82 308.1 208 72.1
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 7.5e-82 307.8 201 73.6
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.3e-81 307.0 201 74.1
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 1.3e-81 307.0 208 72.1
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 1.3e-81 307.0 204 73.5
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 2.2e-81 306.2 203 73.4
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 2.9e-81 305.8 210 70.5
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 3.7e-81 305.4 203 73.4
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 3.7e-81 305.4 199 75.4
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 4.9e-81 305.1 205 72.7
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 6.4e-81 304.7 201 76.1
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 6.4e-81 304.7 202 72.8
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 8.3e-81 304.3 203 70.0
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 1.1e-80 303.9 200 73.5
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 1.9e-80 303.1 202 72.8
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 1.9e-80 303.1 202 74.3
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.9e-80 303.1 202 72.3
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 2.4e-80 302.8 199 75.4
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 3.2e-80 302.4 212 71.7
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 3.2e-80 302.4 207 68.6
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 4.1e-80 302.0 202 70.8
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 4.1e-80 302.0 203 73.4
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 4.1e-80 302.0 203 72.9
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 5.4e-80 301.6 208 71.2
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 4.6e-79 298.5 208 69.7
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 4.6e-79 298.5 203 71.9
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 3.0e-78 295.8 202 71.8
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 5.0e-78 295.0 200 73.5
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 5.0e-78 295.0 190 74.2
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 8.6e-78 294.3 206 68.4
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 8.6e-78 294.3 199 74.4
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 4.3e-77 292.0 226 65.0
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 5.6e-77 291.6 198 70.2
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 5.6e-77 291.6 203 71.9
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 1.2e-76 290.4 199 70.9
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 1.2e-76 290.4 207 66.7
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.6e-76 290.0 209 68.9
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 2.1e-76 289.7 204 69.6
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 2.8e-76 289.3 208 72.1
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 2.8e-76 289.3 204 71.6
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 3.6e-76 288.9 197 69.5
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 3.6e-76 288.9 198 70.2
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 4.7e-76 288.5 198 69.7
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 4.7e-76 288.5 198 69.7
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 6.2e-76 288.1 204 70.6
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.1e-75 287.3 204 70.6
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 8.9e-75 284.3 198 70.2
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 1.2e-74 283.9 208 66.3
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 2.0e-74 283.1 198 68.7
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 4.4e-74 282.0 201 69.7
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 4.4e-74 282.0 203 69.0
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 5.8e-74 281.6 236 61.4
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.7e-73 280.0 203 67.5
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 2.2e-73 279.6 183 76.0
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 4.9e-73 278.5 218 68.3
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 1.4e-72 276.9 210 64.3
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 5.4e-72 275.0 199 67.8
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 9.2e-72 274.2 200 66.5
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 1.2e-71 273.9 280 53.9
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 6.0e-71 271.6 198 68.2
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 7.8e-71 271.2 198 67.7
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 3.0e-70 269.2 218 63.8
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.5e-69 266.9 181 73.5
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 9.5e-69 264.2 210 64.3
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 2.3e-67 259.6 207 62.8
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 2.9e-65 252.7 196 63.8
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 6.4e-65 251.5 200 60.0
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 1.9e-64 250.0 182 67.0
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 1.1e-61 240.7 198 62.6
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 8.9e-59 231.1 156 73.7
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 1.4e-56 223.8 138 78.3
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 2.4e-51 206.5 209 48.3
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 6.9e-51 204.9 132 74.2
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 9.3e-48 194.5 116 81.0
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 7.9e-47 191.4 182 58.2
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 3.7e-44 182.6 96 90.6
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 2.4e-43 179.9 114 75.4
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 3.1e-43 179.5 136 59.6
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.2e-42 177.6 110 77.3
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 6.7e-38 161.8 112 72.3
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 9.0e-35 151.4 108 71.3
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.2e-34 151.0 87 79.3
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 1.0e-33 147.9 91 82.4
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 5.3e-27 125.6 71 85.9
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 1.2e-26 124.4 77 75.3
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 4.5e-26 122.5 108 61.1
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 1.1e-24 117.9 85 70.6
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 3.2e-24 116.3 91 65.9
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 5.5e-24 115.5 70 75.7
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 3.6e-23 112.8 112 52.7
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 7.9e-23 111.7 110 58.2
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 6.3e-20 102.1 86 57.0
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 2.0e-18 97.1 81 59.3
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 1.0e-17 94.7 65 70.8
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 1.1e-16 91.3 67 65.7
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 4.8e-12 75.9 52 73.1


User provided reference genes

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