Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G529.8 Capsicum annuum HOM05D003009 ORTHO05D001701 1.1e-65 253.1 125 100.0
PGSC0003DMG400029698 Solanum tuberosum HOM05D003009 ORTHO05D001701 2.1e-43 179.1 113 73.5
Solyc02g078060.1 Solanum lycopersicum HOM05D003009 ORTHO05D001701 2.6e-41 172.2 121 71.1
Sopen02g022900 Solanum pennellii HOM05D003009 ORTHO05D001701 1.7e-37 159.5 113 67.3
Nitab4.5_0012561g0010 Nicotiana tabacum HOM05D003009 ORTHO05D001701 1.8e-34 149.4 114 64.9
Nitab4.5_0001652g0160 Nicotiana tabacum HOM05D003009 ORTHO05D001701 2.3e-34 149.1 114 62.3
Nitab4.5_0001652g0140 Nicotiana tabacum HOM05D003009 ORTHO05D001701 1.8e-31 139.4 114 62.3
Peaxi162Scf00250g00037 Petunia axillaris HOM05D003009 ORTHO05D001701 1.8e-31 139.4 112 64.3
Peaxi162Scf00250g00058 Petunia axillaris HOM05D003009 ORTHO05D001701 5.6e-28 127.9 114 57.0
Peaxi162Scf74053g00003 Petunia axillaris HOM05D003009 ORTHO05D001701 5.6e-28 127.9 114 57.0
Sopen02g022890 Solanum pennellii HOM05D003009 ORTHO05D001701 1.2e-27 126.7 114 57.0
CAN.G529.9 Capsicum annuum HOM05D000185 ORTHO05D001701 1.6e-27 126.3 114 56.1
Solyc02g078100.3 Solanum lycopersicum HOM05D003009 ORTHO05D001701 1.6e-27 126.3 119 53.8
Sopen02g022930 Solanum pennellii HOM05D003009 ORTHO05D001701 1.6e-27 126.3 119 53.8
Peaxi162Scf00250g00029 Petunia axillaris HOM05D003009 ORTHO05D001701 4.0e-26 121.7 110 55.5
PGSC0003DMG400029699 Solanum tuberosum HOM05D003009 ORTHO05D001701 6.8e-26 120.9 114 53.5
Solyc02g078050.4 Solanum lycopersicum HOM05D003009 ORTHO05D001701 1.2e-25 120.2 114 55.3
Nitab4.5_0001652g0150 Nicotiana tabacum HOM05D003009 ORTHO05D001701 7.5e-25 117.5 113 53.1
PGSC0003DMG400029695 Solanum tuberosum HOM05D003009 ORTHO05D001701 1.7e-24 116.3 119 52.1
Nitab4.5_0009438g0020 Nicotiana tabacum HOM05D003009 ORTHO05D001701 2.7e-22 109.0 108 53.7
CAN.G529.5 Capsicum annuum HOM05D003009 ORTHO05D001701 3.0e-21 105.5 115 49.6
PGSC0003DMG400029700 Solanum tuberosum HOM05D003009 ORTHO05D001701 1.2e-17 93.6 115 43.5
Solyc02g078040.3 Solanum lycopersicum HOM05D003009 ORTHO05D001701 5.8e-17 91.3 115 45.2
Sopen02g022880 Solanum pennellii HOM05D003009 ORTHO05D001701 5.8e-17 91.3 115 45.2
Oeu064785.1 Olea europaea HOM05D003009 ORTHO05D001701 7.5e-17 90.9 113 41.6
MSTRG.7337 Avicennia marina HOM05D003009 ORTHO05D001701 1.7e-16 89.7 113 41.6
CAN.G529.10 Capsicum annuum HOM05D003009 ORTHO05D001701 2.2e-16 89.4 113 42.5
Nitab4.5_0001652g0100 Nicotiana tabacum HOM05D003009 ORTHO05D001701 2.2e-16 89.4 113 41.6
Peaxi162Scf00250g00053 Petunia axillaris HOM05D003009 ORTHO05D001701 2.9e-16 89.0 118 43.2
SGA_v2.0_scaffold22G09698 Striga asiatica HOM05D003009 ORTHO05D001701 4.9e-16 88.2 120 40.0
Dinv40571 Davidia involucrata HOM05D003009 ORTHO05D001701 6.4e-16 87.8 114 42.1
vmacro03876 Vaccinium macrocarpon HOM05D003009 ORTHO05D001701 1.4e-15 86.7 118 44.9
Oeu033907.1 Olea europaea HOM05D003009 ORTHO05D001701 1.9e-15 86.3 113 40.7
Rhsim13G0179100 Rhododendron simsii HOM05D003009 ORTHO05D001701 5.4e-15 84.7 119 39.5
ECA236G1979 Erigeron canadensis HOM05D003009 ORTHO05D001701 1.2e-14 83.6 115 44.3
HanXRQChr16g0516201 Helianthus annuus HOM05D003009 ORTHO05D001701 1.6e-14 83.2 114 44.7
Lj2A289T21 Lonicera japonica HOM05D003009 ORTHO05D001701 2.1e-14 82.8 114 41.2
Lsat_1_v5_gn_4_53840 Lactuca sativa HOM05D003009 ORTHO05D001701 3.5e-14 82.0 115 43.5
MELO3C007279.2 Cucumis melo HOM05D003009 ORTHO05D001701 6.0e-14 81.3 107 45.8
Actinidia05644 Actinidia chinensis HOM05D003009 ORTHO05D001701 1.0e-13 80.5 111 41.4
Dinv17322 Davidia involucrata HOM05D003009 ORTHO05D001701 1.3e-13 80.1 114 40.4
HanXRQChr04g0124251 Helianthus annuus HOM05D003009 ORTHO05D001701 1.3e-13 80.1 114 41.2
Lsat_1_v5_gn_7_21560 Lactuca sativa HOM05D003009 ORTHO05D001701 2.3e-13 79.3 115 47.0
CsaV3_6G050170 Cucumis sativus L. HOM05D003009 ORTHO05D001701 3.0e-13 79.0 107 44.9
DCAR_004069 Daucus carota HOM05D003009 ORTHO05D001701 3.0e-13 79.0 114 37.7
CANSAT35G1820 Cannabis sativa HOM05D003009 ORTHO05D001701 5.1e-13 78.2 104 41.3
ClCG01G023040 Citrullus lanatus HOM05D003009 ORTHO05D001701 6.6e-13 77.8 107 44.9
Nitab4.5_0011894g0010 Nicotiana tabacum HOM05D003009 ORTHO05D001701 6.6e-13 77.8 102 41.2
unitig_22.g6231 Utricularia gibba HOM05D003009 ORTHO05D001701 8.6e-13 77.4 111 37.8
GSVIVG01007286001 Vitis vinifera HOM05D003009 ORTHO05D001701 8.6e-13 77.4 114 39.5
Aa31sc225G10 Aethionema arabicum HOM05D003009 ORTHO05D001701 3.3e-12 75.5 104 42.3
CiPaw.09G060900 Carya illinoinensis HOM05D003009 ORTHO05D001701 7.3e-12 74.3 105 42.9
Lj1A1203T34 Lonicera japonica HOM05D003009 ORTHO05D001701 9.5e-12 73.9 116 40.5
Hma1.2p1_0736F.1_g210750 Hydrangea macrophylla HOM05D003009 ORTHO05D001701 1.6e-11 73.2 114 40.4
FvH4_3g09040 Fragaria vesca HOM05D003009 ORTHO05D001701 2.1e-11 72.8 113 39.8
FAN11G0879 Fragaria x ananassa HOM05D003009 ORTHO05D001701 2.1e-11 72.8 113 39.8
MD05G1338000 Malus domestica HOM05D003009 ORTHO05D001701 2.1e-11 72.8 105 41.9
Sed0006317 Sechium edule HOM05D003009 ORTHO05D001701 2.8e-11 72.4 107 42.1
MD10G1293100 Malus domestica HOM05D003009 ORTHO05D001701 3.6e-11 72.0 105 41.0
Prupe.4G048800 Prunus persica HOM05D003009 ORTHO05D001701 4.7e-11 71.6 105 38.1
FAN25G2997 Fragaria x ananassa HOM05D003009 ORTHO05D001701 8.1e-11 70.9 113 38.9
QL05p041061 Quercus lobata HOM05D003009 ORTHO05D001701 8.1e-11 70.9 110 40.0
RcHm_v2.0_Chr5g0008631 Rosa chinensis HOM05D003009 ORTHO05D001701 8.1e-11 70.9 113 40.7
Cfa000485 Carpinus fangiana HOM05D003009 ORTHO05D001701 1.1e-10 70.5 107 39.3
QL05p041024 Quercus lobata HOM05D003009 ORTHO05D001701 1.1e-10 70.5 105 39.0
FAN16G3267 Fragaria x ananassa HOM05D003009 ORTHO05D001701 3.1e-10 68.9 113 38.9
MBI07_g30189_MAGBIO Magnolia biondii HOM05D002105 ORTHO05D001271 3.1e-10 68.9 113 34.5
CSS0013482 Camellia sinensis var. sinensis HOM05D003009 ORTHO05D001701 4.0e-10 68.6 112 34.8
DCAR_008035 Daucus carota HOM05D003009 ORTHO05D001701 4.0e-10 68.6 117 37.6
FAN21G3284 Fragaria x ananassa HOM05D003009 ORTHO05D001701 4.0e-10 68.6 113 38.1
Rhsim02G0131200 Rhododendron simsii HOM05D003009 ORTHO05D001701 5.2e-10 68.2 114 38.6
Rhsim02G0131700 Rhododendron simsii HOM05D003009 ORTHO05D001701 5.2e-10 68.2 112 40.2
CARHR127890 Cardamine hirsuta HOM05D003009 ORTHO05D001701 6.8e-10 67.8 104 38.5
Sp4g16170 Schrenkiella parvula HOM05D003009 ORTHO05D001701 8.9e-10 67.4 103 37.9
Cfa002262 Carpinus fangiana HOM05D003009 ORTHO05D001701 1.2e-09 67.0 108 40.7
AL4G29510 Arabidopsis lyrata HOM05D003009 ORTHO05D001701 1.5e-09 66.6 104 34.6
Potri.004G044700 Populus trichocarpa HOM05D003009 ORTHO05D001701 1.5e-09 66.6 111 38.7
THA.LOC104812275 Tarenaya hassleriana HOM05D003009 ORTHO05D001701 2.0e-09 66.2 109 34.9
AT2G33790 Arabidopsis thaliana HOM05D003009 ORTHO05D001701 2.6e-09 65.9 103 36.9
Duzib160G0415 Durio zibethinus HOM05D003009 ORTHO05D001701 2.6e-09 65.9 107 38.3
ClCG03G008180 Citrullus lanatus HOM05D003009 ORTHO05D001701 7.5e-09 64.3 108 38.0
Carub.0001s2673 Capsella rubella HOM05D003009 ORTHO05D001701 9.9e-09 63.9 104 40.4
Aa31sc225G30 Aethionema arabicum HOM05D003009 ORTHO05D001701 1.3e-08 63.5 105 40.0
Duzib192G0967 Durio zibethinus HOM05D003009 ORTHO05D001701 2.2e-08 62.8 105 39.0
Duzib235G1045 Durio zibethinus HOM05D003009 ORTHO05D001701 2.9e-08 62.4 105 39.0
Sed0027600 Sechium edule HOM05D003009 ORTHO05D001701 2.9e-08 62.4 108 38.9
THA.LOC104820687 Tarenaya hassleriana HOM05D003009 ORTHO05D001701 2.9e-08 62.4 105 35.2
MELO3C002610.2 Cucumis melo HOM05D003009 ORTHO05D001701 3.7e-08 62.0 108 37.0
CsaV3_1G012370 Cucumis sativus L. HOM05D003009 ORTHO05D001701 3.7e-08 62.0 108 38.0
Eucgr.D00613 Eucalyptus grandis HOM05D003009 ORTHO05D001701 3.7e-08 62.0 111 36.0
Sabra04G0027800 Salix brachista HOM05D003009 ORTHO05D001701 3.7e-08 62.0 113 34.5
ECA234G4352 Erigeron canadensis HOM05D003009 ORTHO05D001701 4.9e-08 61.6 106 40.6
PSO210G4623 Papaver somniferum HOM05D003009 ORTHO05D001701 1.4e-07 60.1 111 33.3
PSO832G2944 Papaver somniferum HOM05D003009 ORTHO05D001701 1.9e-07 59.7 113 32.7
TAR636G0399 Trochodendron aralioides HOM05D002284 ORTHO05D002427 3.2e-07 58.9 129 34.1
QL10p046489 Quercus lobata HOM05D003294 ORTHO05D004060 4.1e-07 58.5 76 40.8
PGR042G0148 Punica granatum HOM05D003009 ORTHO05D001701 5.4e-07 58.2 72 40.3
Sc05g0007600 Simmondsia chinensis HOM05D003009 ORTHO05D001701 5.4e-07 58.2 108 34.3
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 7.1e-07 57.8 116 31.0
PSO339G4243 Papaver somniferum HOM05D007206 ORTHO05D009176 7.1e-07 57.8 84 44.0
vmacro15914 Vaccinium macrocarpon HOM05D003009 ORTHO05D001701 7.1e-07 57.8 110 38.2
Aqoxy2G04082 Aquilegia oxysepala HOM05D003294 ORTHO05D004060 9.2e-07 57.4 75 42.7
AT1G28290 Arabidopsis thaliana HOM05D003009 ORTHO05D001701 9.2e-07 57.4 110 35.5
AT2G34700 Arabidopsis thaliana HOM05D003009 ORTHO05D001701 9.2e-07 57.4 117 33.3
Thhalv10008255m.g Eutrema salsugineum HOM05D003009 ORTHO05D001701 1.2e-06 57.0 105 34.3
Aa31LG6G5170 Aethionema arabicum HOM05D003009 ORTHO05D001701 1.6e-06 56.6 116 35.3
Ah.14g089500 Amaranthus hybridus HOM05D003009 ORTHO05D038262 2.1e-06 56.2 112 33.0
Nn7g38030 Nelumbo nucifera HOM05D003294 ORTHO05D004060 2.1e-06 56.2 79 39.2
Prupe.7G084000 Prunus persica HOM05D003009 ORTHO05D001701 2.1e-06 56.2 107 37.4
TAR636G1141 Trochodendron aralioides HOM05D002284 ORTHO05D002427 2.1e-06 56.2 120 32.5
BcaB07g32438 Brassica carinata HOM05D003009 ORTHO05D001701 2.7e-06 55.8 105 33.3
MBI19_g30018_MAGBIO Magnolia biondii HOM05D002284 ORTHO05D002427 2.7e-06 55.8 49 51.0
PSO135G0310 Papaver somniferum HOM05D003009 ORTHO05D001701 2.7e-06 55.8 112 37.5
BcaC05g26833 Brassica carinata HOM05D003009 ORTHO05D001701 3.5e-06 55.5 106 34.9
A09p37790 Brassica napus HOM05D003009 ORTHO05D001701 3.5e-06 55.5 106 34.9
BolC5t31428H Brassica oleracea HOM05D003009 ORTHO05D001701 3.5e-06 55.5 106 34.9
BraA09t39290Z Brassica rapa HOM05D003009 ORTHO05D001701 3.5e-06 55.5 106 34.9
Thhalv10017961m.g Eutrema salsugineum HOM05D003009 ORTHO05D001701 3.5e-06 55.5 112 33.9
MBI18_g21795_MAGBIO Magnolia biondii HOM05D002284 ORTHO05D002427 3.5e-06 55.5 115 33.9
Sp1g24490 Schrenkiella parvula HOM05D003009 ORTHO05D001701 3.5e-06 55.5 113 34.5
Atru.chr12.377 Acer truncatum HOM05D002284 ORTHO05D002427 4.6e-06 55.1 116 35.3
HanXRQChr13g0400551 Helianthus annuus HOM05D007206 ORTHO05D009176 4.6e-06 55.1 76 42.1
Lalb_Chr16g0383811 Lupinus albus HOM05D003009 ORTHO05D001701 4.6e-06 55.1 107 36.4
AL1G41840 Arabidopsis lyrata HOM05D003009 ORTHO05D001701 6.0e-06 54.7 107 35.5
PSO063G3127 Papaver somniferum HOM05D007206 ORTHO05D009176 6.0e-06 54.7 82 42.7
PSO724G1154 Papaver somniferum HOM05D003009 ORTHO05D001701 6.0e-06 54.7 112 37.5
Atru.chr12.360 Acer truncatum HOM05D002284 ORTHO05D002427 7.8e-06 54.3 91 38.5
Aqoxy2G03141 Aquilegia oxysepala HOM05D002284 ORTHO05D002427 7.8e-06 54.3 124 33.1
Carub.0004s1639 Capsella rubella HOM05D003009 ORTHO05D001701 7.8e-06 54.3 112 32.1


User provided reference genes

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