Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 2.4e-133 478.8 234 100.0
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 6.2e-113 411.0 235 88.1
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 1.8e-112 409.5 235 87.7
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 4.4e-95 351.7 238 75.2
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.7e-91 339.7 239 72.8
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 6.6e-83 311.2 234 65.0
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 1.3e-81 307.0 228 65.8
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 8.1e-81 304.3 232 64.2
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 5.3e-80 301.6 220 65.0
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 4.9e-78 295.0 222 64.4
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 1.1e-77 293.9 216 66.2
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 3.2e-77 292.4 236 60.6
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 1.6e-76 290.0 233 62.2
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 1.6e-76 290.0 237 61.2
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 4.6e-76 288.5 238 62.2
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 4.6e-76 288.5 219 62.1
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 6.0e-76 288.1 216 64.8
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 7.9e-76 287.7 213 66.2
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 1.3e-75 287.0 235 61.7
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 2.3e-75 286.2 236 61.4
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 3.9e-75 285.4 219 62.6
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 5.1e-75 285.0 238 59.7
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 1.1e-74 283.9 230 59.1
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 2.5e-74 282.7 237 60.3
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 2.5e-74 282.7 237 59.9
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 5.6e-74 281.6 238 59.2
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 9.6e-74 280.8 213 64.3
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 9.6e-74 280.8 219 63.0
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 2.8e-73 279.3 204 65.7
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 8.1e-73 277.7 216 62.0
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 1.4e-72 276.9 232 58.2
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 4.0e-72 275.4 230 59.1
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 6.9e-72 274.6 233 58.4
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 9.0e-72 274.2 232 57.8
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 1.2e-71 273.9 233 60.1
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 2.0e-71 273.1 231 59.7
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 5.8e-71 271.6 214 60.3
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.8e-70 268.9 233 56.2
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.9e-70 268.5 226 59.7
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 4.9e-70 268.5 235 55.7
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 6.4e-70 268.1 217 59.9
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 4.2e-69 265.4 230 57.4
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 5.5e-69 265.0 214 61.2
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 9.3e-69 264.2 215 61.4
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 9.3e-69 264.2 221 59.3
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 2.1e-68 263.1 179 68.2
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 2.3e-67 259.6 216 59.3
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 6.7e-67 258.1 243 54.7
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 6.7e-67 258.1 209 59.8
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 8.7e-67 257.7 223 59.2
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 1.5e-66 256.9 231 55.8
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 1.9e-66 256.5 229 55.9
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 3.3e-66 255.8 229 55.9
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 5.6e-66 255.0 232 55.6
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 1.3e-65 253.8 262 51.5
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 2.8e-65 252.7 225 55.1
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 3.7e-65 252.3 215 57.2
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 1.1e-64 250.8 216 60.2
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 2.4e-64 249.6 229 54.6
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 2.4e-64 249.6 225 56.0
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 2.4e-64 249.6 218 57.3
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 4.0e-64 248.8 237 55.3
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 4.0e-64 248.8 214 57.5
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.2e-63 247.3 222 56.8
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 1.5e-63 246.9 220 57.7
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 7.6e-63 244.6 180 65.0
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 1.7e-62 243.4 226 55.3
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 2.2e-62 243.0 226 55.3
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 4.9e-62 241.9 218 58.3
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 1.9e-61 240.0 231 53.2
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 5.5e-61 238.4 226 53.1
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 5.5e-61 238.4 226 53.1
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 5.5e-61 238.4 172 66.9
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 9.3e-61 237.7 230 54.3
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.1e-60 236.5 183 63.4
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 2.1e-60 236.5 254 51.2
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 6.0e-60 235.0 208 56.7
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 7.9e-60 234.6 249 53.4
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 3.0e-59 232.6 218 52.3
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 1.6e-57 226.9 183 59.0
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 1.6e-57 226.9 235 52.8
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 2.1e-57 226.5 236 48.3
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 1.2e-55 220.7 201 54.7
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 1.5e-55 220.3 205 52.7
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 3.6e-52 209.1 150 64.0
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 5.1e-51 205.3 155 63.9
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 6.7e-51 204.9 169 57.4
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 1.3e-49 200.7 198 53.0
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 2.8e-49 199.5 219 47.5
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 1.4e-48 197.2 214 48.1
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 6.9e-48 194.9 180 52.2
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.6e-47 193.0 172 57.0
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 1.0e-46 191.0 206 51.5
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.5e-45 186.4 163 57.1
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 3.2e-45 186.0 143 62.2
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 6.3e-41 171.8 217 47.0
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 1.2e-39 167.5 171 47.4
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.0e-39 166.8 151 56.3
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 1.1e-37 161.0 171 48.5
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 7.2e-37 158.3 141 58.2
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 5.7e-34 148.7 209 40.2
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 9.7e-34 147.9 215 39.1
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 9.7e-34 147.9 159 50.3
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 2.9e-30 136.3 111 56.8
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 2.2e-22 110.2 156 46.2
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 3.6e-20 102.8 59 72.9
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.0e-18 97.1 71 64.8
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 3.4e-18 96.3 120 36.7
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 7.5e-18 95.1 69 62.3
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 6.3e-17 92.0 113 43.4
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.3e-14 83.6 55 76.4
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 2.9e-14 83.2 76 51.3
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 4.7e-12 75.9 178 28.1
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 2.6e-10 70.1 84 45.2
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.4e-10 69.3 166 33.7
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.7e-09 66.2 95 44.2
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 8.3e-09 65.1 38 71.1
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 4.5e-07 59.3 37 59.5
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.0e-06 58.2 36 61.1
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 5.0e-06 55.8 35 60.0


User provided reference genes

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