Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G5283.1 Capsicum annuum HOM05D001123 ORTHO05D000966 2.1e-52 208.8 106 100.0
CAN.G2187.1 Capsicum annuum HOM05D001123 ORTHO05D000966 1.3e-46 189.5 106 89.6
CAN.G836.29 Capsicum annuum HOM05D001123 ORTHO05D000966 5.4e-40 167.5 91 92.3
Sopen02g034880 Solanum pennellii HOM05D001123 ORTHO05D000966 3.3e-37 158.3 92 89.1
Solyc02g090190.1 Solanum lycopersicum HOM05D001123 ORTHO05D000966 5.6e-37 157.5 92 88.0
PGSC0003DMG400010030 Solanum tuberosum HOM05D001123 ORTHO05D000966 9.5e-37 156.8 92 89.1
CAN.G21.15 Capsicum annuum HOM05D001123 ORTHO05D000966 3.0e-30 135.2 78 85.9
Peaxi162Scf00535g00076 Petunia axillaris HOM05D001123 ORTHO05D000966 6.6e-30 134.0 92 79.3
Nitab4.5_0000108g0250 Nicotiana tabacum HOM05D001123 ORTHO05D000966 1.1e-29 133.3 96 77.1
Nitab4.5_0001014g0100 Nicotiana tabacum HOM05D001123 ORTHO05D000966 2.8e-28 128.6 96 75.0
CAN.G1720.6 Capsicum annuum HOM05D001123 ORTHO05D000966 1.4e-27 126.3 106 66.0
Dinv39909 Davidia involucrata HOM05D001123 ORTHO05D000966 1.2e-18 96.7 106 53.8
Oeu039053.1 Olea europaea HOM05D001123 ORTHO05D000966 3.4e-18 95.1 102 57.8
Peaxi162Scf02201g00002 Petunia axillaris HOM05D001123 ORTHO05D000966 9.8e-18 93.6 97 58.8
MSTRG.3406 Avicennia marina HOM05D001123 ORTHO05D000966 2.4e-16 89.0 102 56.9
Oeu032932.1 Olea europaea HOM05D001123 ORTHO05D000966 2.4e-16 89.0 97 55.7
Oeu003953.1 Olea europaea HOM05D001123 ORTHO05D000966 3.2e-16 88.6 102 53.9
Oeu003946.1 Olea europaea HOM05D001123 ORTHO05D000966 1.6e-15 86.3 103 53.4
SalBow1G2401 Salvia bowleyana HOM05D001123 ORTHO05D000966 2.1e-15 85.9 93 58.1
Atru.chr3.452 Acer truncatum HOM05D001123 ORTHO05D000966 2.7e-15 85.5 109 51.4
SalBow1G7475 Salvia bowleyana HOM05D001123 ORTHO05D000966 7.8e-15 84.0 93 57.0
QL06p043882 Quercus lobata HOM05D001123 ORTHO05D000966 1.1e-13 80.1 109 48.6
MSTRG.23797 Avicennia marina HOM05D001123 ORTHO05D000966 2.5e-13 79.0 101 53.5
Lj4g0020631 Lotus japonicus HOM05D001123 ORTHO05D000966 2.5e-13 79.0 101 48.5
Psat4g089720 Pisum sativum HOM05D001123 ORTHO05D000966 2.5e-13 79.0 104 50.0
TWI73G0026 Tripterygium wilfordii HOM05D001123 ORTHO05D000966 3.3e-13 78.6 109 51.4
TWI09G1248 Tripterygium wilfordii HOM05D001123 ORTHO05D000966 4.3e-13 78.2 109 52.3
Medtr8g079020 Medicago truncatula HOM05D001123 ORTHO05D000966 5.6e-13 77.8 104 48.1
VMungo0871G0001 Vigna mungo HOM05D001123 ORTHO05D000966 5.6e-13 77.8 99 49.5
Glyma.02G062200 Glycine max HOM05D001123 ORTHO05D000966 7.3e-13 77.4 99 48.5
Glyma.02G062500 Glycine max HOM05D001123 ORTHO05D000966 7.3e-13 77.4 99 48.5
Phvul.003G248700 Phaseolus vulgaris HOM05D001123 ORTHO05D000966 9.5e-13 77.0 99 48.5
Glyma.16G144500 Glycine max HOM05D001123 ORTHO05D000966 1.2e-12 76.6 99 48.5
Glyma.16G144800 Glycine max HOM05D001123 ORTHO05D000966 1.2e-12 76.6 99 48.5
Phvul.003G249000 Phaseolus vulgaris HOM05D001123 ORTHO05D000966 1.2e-12 76.6 99 48.5
SalBow1G5865 Salvia bowleyana HOM05D001123 ORTHO05D000966 1.2e-12 76.6 100 50.0
SalBow1G8715 Salvia bowleyana HOM05D001123 ORTHO05D000966 1.2e-12 76.6 100 50.0
MSTRG.15408 Avicennia marina HOM05D001123 ORTHO05D000966 2.1e-12 75.9 102 50.0
Lalb_Chr09g0322891 Lupinus albus HOM05D001123 ORTHO05D000966 2.1e-12 75.9 105 47.6
TPR.G11251 Trifolium pratense HOM05D001123 ORTHO05D000966 2.1e-12 75.9 104 48.1
CiPaw.02G012500 Carya illinoinensis HOM05D001123 ORTHO05D000966 2.8e-12 75.5 107 47.7
Dinv26756 Davidia involucrata HOM05D001123 ORTHO05D000966 2.8e-12 75.5 101 48.5
Cc07_g05510 Coffea canephora HOM05D001123 ORTHO05D000966 3.6e-12 75.1 106 47.2
TAR381G1074 Trochodendron aralioides HOM05D001123 ORTHO05D000966 3.6e-12 75.1 110 47.3
Actinidia12080 Actinidia chinensis HOM05D001123 ORTHO05D000966 8.1e-12 73.9 101 44.6
MD02G1160800 Malus domestica HOM05D001123 ORTHO05D000966 8.1e-12 73.9 106 50.0
Hma1.2p1_0546F.1_g176140 Hydrangea macrophylla HOM05D001123 ORTHO05D000966 1.1e-11 73.6 102 49.0
Ca_22218_v3 Cicer arietinum L. HOM05D001123 ORTHO05D000966 1.8e-11 72.8 104 46.2
Lj4g0012437 Lotus japonicus HOM05D001123 ORTHO05D000966 1.8e-11 72.8 104 47.1
Prupe.7G142800 Prunus persica HOM05D001123 ORTHO05D000966 1.8e-11 72.8 108 45.4
Potri.007G036100 Populus trichocarpa HOM05D001123 ORTHO05D000966 2.3e-11 72.4 101 47.5
Sabra07G0031500 Salix brachista HOM05D001123 ORTHO05D000966 2.3e-11 72.4 101 47.5
Haze_15181 Corylus avellana HOM05D001123 ORTHO05D000966 3.1e-11 72.0 109 47.7
Nn5g29396 Nelumbo nucifera HOM05D001123 ORTHO05D000966 3.1e-11 72.0 103 45.6
TAR625G0798 Trochodendron aralioides HOM05D001123 ORTHO05D000966 3.1e-11 72.0 109 47.7
arahy.Tifrunner.gnm1.ann1.Y5U0FM Arachis hypogaea HOM05D001123 ORTHO05D000966 5.2e-11 71.2 98 46.9
Ciclev10024810m.g Citrus clementina HOM05D001123 ORTHO05D000966 5.2e-11 71.2 108 45.4
Lalb_Chr05g0213111 Lupinus albus HOM05D001123 ORTHO05D000966 6.8e-11 70.9 105 45.7
CSS0028279 Camellia sinensis var. sinensis HOM05D001123 ORTHO05D000966 8.9e-11 70.5 101 44.6
Ca_22216_v3 Cicer arietinum L. HOM05D001123 ORTHO05D000966 8.9e-11 70.5 104 46.2
FAN23G1160 Fragaria x ananassa HOM05D001123 ORTHO05D000966 8.9e-11 70.5 107 48.6
Potri.005G131300 Populus trichocarpa HOM05D001123 ORTHO05D000966 8.9e-11 70.5 103 50.5
arahy.Tifrunner.gnm1.ann1.9HQ4ZM Arachis hypogaea HOM05D001123 ORTHO05D000966 1.2e-10 70.1 98 45.9
Cpa.g.sc15.93 Carica papaya HOM05D001123 ORTHO05D000966 1.5e-10 69.7 107 47.7
Gohir.A02G160600 Gossypium hirsutum HOM05D001123 ORTHO05D000966 1.5e-10 69.7 102 52.0
Gohir.D03G019800 Gossypium hirsutum HOM05D001123 ORTHO05D000966 1.5e-10 69.7 102 52.0
FAN26G2494 Fragaria x ananassa HOM05D001123 ORTHO05D000966 2.0e-10 69.3 107 45.8
Gohir.D11G195400 Gossypium hirsutum HOM05D001123 ORTHO05D000966 2.0e-10 69.3 108 46.3
FAN19G0422 Fragaria x ananassa HOM05D001123 ORTHO05D000966 2.6e-10 68.9 107 47.7
Thecc.01G047600 Theobroma cacao HOM05D001123 ORTHO05D000966 2.6e-10 68.9 108 48.1
CANSAT01G0896 Cannabis sativa HOM05D001123 ORTHO05D000966 3.4e-10 68.6 109 43.1
CsaV3_2G017240 Cucumis sativus L. HOM05D001123 ORTHO05D000966 3.4e-10 68.6 109 45.0
Duzib187G1163 Durio zibethinus HOM05D001123 ORTHO05D000966 3.4e-10 68.6 108 48.1
RcHm_v2.0_Chr2g0103701 Rosa chinensis HOM05D001123 ORTHO05D000966 3.4e-10 68.6 107 46.7
SGA_v2.0_scaffold15G07226 Striga asiatica HOM05D001123 ORTHO05D000966 3.4e-10 68.6 91 50.5
Gorai.003G020900 Gossypium raimondii HOM05D001123 ORTHO05D000966 4.4e-10 68.2 102 51.0
Gorai.007G209300 Gossypium raimondii HOM05D001123 ORTHO05D000966 4.4e-10 68.2 108 45.4
CSS0030273 Camellia sinensis var. sinensis HOM05D001123 ORTHO05D000966 5.8e-10 67.8 101 46.5
FAN28G2464 Fragaria x ananassa HOM05D001123 ORTHO05D000966 5.8e-10 67.8 107 46.7
MSTRG.2915 Avicennia marina HOM05D001123 ORTHO05D000966 7.6e-10 67.4 100 51.0
CiPaw.01G026900 Carya illinoinensis HOM05D001123 ORTHO05D000966 7.6e-10 67.4 108 39.8
MELO3C007525.2 Cucumis melo HOM05D001123 ORTHO05D000966 7.6e-10 67.4 90 46.7
Duzib264G1054 Durio zibethinus HOM05D001123 ORTHO05D000966 7.6e-10 67.4 108 47.2
Psat4g089640 Pisum sativum HOM05D001123 ORTHO05D000966 7.6e-10 67.4 104 46.2
Cfa004220 Carpinus fangiana HOM05D001123 ORTHO05D000966 9.9e-10 67.0 112 44.6
DCAR_025682 Daucus carota HOM05D001123 ORTHO05D000966 9.9e-10 67.0 101 45.5
FvH4_1g14760 Fragaria vesca HOM05D001123 ORTHO05D000966 9.9e-10 67.0 107 46.7
Prupe.1G388400 Prunus persica HOM05D001123 ORTHO05D000966 9.9e-10 67.0 101 47.5
Gohir.A11G188900 Gossypium hirsutum HOM05D001123 ORTHO05D000966 1.3e-09 66.6 108 46.3
MD15G1274900 Malus domestica HOM05D001123 ORTHO05D000966 1.7e-09 66.2 107 44.9
Sabra05G0106700 Salix brachista HOM05D001123 ORTHO05D000966 1.7e-09 66.2 103 48.5
Atru.chr13.596 Acer truncatum HOM05D001123 ORTHO05D000966 2.2e-09 65.9 110 46.4
COL.COLO4_11320 Corchorus olitorius HOM05D001123 ORTHO05D000966 2.2e-09 65.9 101 47.5
CsaV3_6G042860 Cucumis sativus L. HOM05D001123 ORTHO05D000966 2.2e-09 65.9 103 47.6
MELO3C020927.2 Cucumis melo HOM05D001123 ORTHO05D000966 2.9e-09 65.5 109 44.0
Medtr8g079040 Medicago truncatula HOM05D001123 ORTHO05D000966 2.9e-09 65.5 104 45.2
QL06p043869 Quercus lobata HOM05D001123 ORTHO05D000966 2.9e-09 65.5 112 44.6
Cfa018484 Carpinus fangiana HOM05D001123 ORTHO05D000966 3.8e-09 65.1 108 40.7
ClCG01G016550 Citrullus lanatus HOM05D001123 ORTHO05D000966 3.8e-09 65.1 103 43.7
Cc10_g03690 Coffea canephora HOM05D001123 ORTHO05D000966 3.8e-09 65.1 110 41.8
Haze_17589 Corylus avellana HOM05D001123 ORTHO05D000966 4.9e-09 64.7 109 40.4
ClCG02G013130 Citrullus lanatus HOM05D001123 ORTHO05D000966 6.4e-09 64.3 109 45.0
MBI16_g19887_MAGBIO Magnolia biondii HOM05D001123 ORTHO05D000966 6.4e-09 64.3 110 44.5
Dinv36013 Davidia involucrata HOM05D001123 ORTHO05D000966 8.4e-09 63.9 110 43.6
MD08G1039700 Malus domestica HOM05D001123 ORTHO05D000966 1.4e-08 63.2 101 43.6
Sed0018940 Sechium edule HOM05D001123 ORTHO05D000966 1.4e-08 63.2 102 46.1
Duzib147G1380 Durio zibethinus HOM05D001123 ORTHO05D000966 3.2e-08 62.0 108 46.3
MBI16_g31476_MAGBIO Magnolia biondii HOM05D001123 ORTHO05D000966 3.2e-08 62.0 105 41.9
MD02G1160700 Malus domestica HOM05D001123 ORTHO05D000966 3.2e-08 62.0 107 43.0
Manes.13G130600 Manihot esculenta HOM05D001123 ORTHO05D000966 3.2e-08 62.0 109 44.0
Aqoxy6G00924 Aquilegia oxysepala HOM05D001123 ORTHO05D000966 4.1e-08 61.6 109 40.4
Sed0000471 Sechium edule HOM05D001123 ORTHO05D000966 4.1e-08 61.6 100 44.0
Rhsim10G0125300 Rhododendron simsii HOM05D001123 ORTHO05D000966 5.4e-08 61.2 99 46.5
MD15G1034300 Malus domestica HOM05D001123 ORTHO05D000966 7.1e-08 60.8 101 41.6
TAR376G0557 Trochodendron aralioides HOM05D001123 ORTHO05D000966 9.2e-08 60.5 109 40.4
CiPaw.16G051500 Carya illinoinensis HOM05D001123 ORTHO05D000966 1.6e-07 59.7 107 39.3
Duzib093G0727 Durio zibethinus HOM05D001123 ORTHO05D000966 2.1e-07 59.3 122 40.2
Prupe.7G142900 Prunus persica HOM05D001123 ORTHO05D000966 2.1e-07 59.3 108 43.5
PGR031G3222 Punica granatum HOM05D001123 ORTHO05D000966 2.1e-07 59.3 102 44.1
ECA232G2671 Erigeron canadensis HOM05D001123 ORTHO05D000966 2.7e-07 58.9 95 46.3
Manes.12G095200 Manihot esculenta HOM05D001123 ORTHO05D000966 3.5e-07 58.5 111 42.3
PSO339G5770 Papaver somniferum HOM05D001123 ORTHO05D000966 4.6e-07 58.2 100 42.0
PSO801G0208 Papaver somniferum HOM05D001123 ORTHO05D000966 4.6e-07 58.2 101 42.6
CiPaw.16G051400 Carya illinoinensis HOM05D001123 ORTHO05D000966 6.0e-07 57.8 107 39.3
Thecc.08G016700 Theobroma cacao HOM05D001123 ORTHO05D000966 6.0e-07 57.8 103 43.7
Sed0023012 Sechium edule HOM05D001123 ORTHO05D000966 7.8e-07 57.4 103 44.7
SHI08738 Sapria himalayana HOM05D001123 ORTHO05D000966 1.3e-06 56.6 101 43.6
Duzib116G0311 Durio zibethinus HOM05D001123 ORTHO05D000966 1.7e-06 56.2 119 39.5
unitig_899.g14646 Utricularia gibba HOM05D001123 ORTHO05D000966 1.7e-06 56.2 91 48.4
GSVIVG01005083001 Vitis vinifera HOM05D001123 ORTHO05D000966 1.7e-06 56.2 101 40.6
CiPaw.15G066300 Carya illinoinensis HOM05D001123 ORTHO05D000966 2.3e-06 55.8 102 39.2
CANSAT25G0047 Cannabis sativa HOM05D001123 ORTHO05D000966 3.9e-06 55.1 96 44.8
Eucgr.F00042 Eucalyptus grandis HOM05D001123 ORTHO05D000966 5.1e-06 54.7 106 42.5
HanXRQChr09g0264431 Helianthus annuus HOM05D001123 ORTHO05D000966 5.1e-06 54.7 96 45.8
Lj4P137T28 Lonicera japonica HOM05D001123 ORTHO05D000966 5.1e-06 54.7 95 45.3
PSO675G1213 Papaver somniferum HOM05D001123 ORTHO05D000966 6.6e-06 54.3 109 40.4
SGA_v2.0_scaffold204G41616 Striga asiatica HOM05D001123 ORTHO05D000966 6.6e-06 54.3 102 49.0
THA.LOC104807577 Tarenaya hassleriana HOM05D001123 ORTHO05D000966 6.6e-06 54.3 104 42.3


User provided reference genes

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