Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 1.3e-213 746.1 382 100.0
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 9.8e-193 676.8 376 91.5
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 1.7e-192 676.0 378 91.5
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 8.3e-176 620.5 370 85.7
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 1.2e-171 606.7 334 92.2
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 3.6e-171 605.1 373 85.0
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 2.9e-160 568.9 354 84.7
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 7.6e-137 491.1 316 78.8
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 1.2e-134 483.8 368 69.0
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 2.2e-131 473.0 317 75.1
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 2.8e-131 472.6 320 74.4
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 3.7e-131 472.2 358 69.6
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 4.8e-131 471.9 358 69.3
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 2.0e-129 466.5 380 66.8
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 3.4e-129 465.7 351 68.9
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 3.4e-129 465.7 319 73.7
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 7.7e-129 464.5 323 74.6
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 6.5e-128 461.5 319 73.0
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 3.2e-127 459.1 307 75.2
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 5.5e-127 458.4 312 74.7
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 1.6e-126 456.8 310 73.2
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 2.1e-126 456.4 330 70.6
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 4.6e-126 455.3 303 76.6
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 6.1e-126 454.9 361 67.0
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 2.0e-124 449.9 326 68.1
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 2.5e-124 449.5 355 66.5
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 2.5e-124 449.5 311 73.6
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 3.3e-124 449.1 312 71.8
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 4.3e-124 448.7 343 67.6
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 2.8e-123 446.0 373 65.1
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 3.7e-123 445.7 312 71.5
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 3.7e-123 445.7 312 71.5
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 6.3e-123 444.9 332 69.0
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 6.3e-123 444.9 321 70.7
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 8.2e-123 444.5 353 65.7
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 1.1e-122 444.1 312 70.8
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 1.4e-122 443.7 372 62.9
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.8e-122 443.4 320 68.4
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 4.1e-122 442.2 379 62.0
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 1.2e-121 440.7 368 63.6
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 3.4e-121 439.1 347 66.3
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 3.4e-121 439.1 370 63.0
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 3.4e-121 439.1 331 66.8
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 3.4e-121 439.1 338 69.2
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 4.5e-121 438.7 339 67.0
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 5.9e-121 438.3 326 70.2
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 7.7e-121 438.0 371 63.1
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 1.0e-120 437.6 321 67.9
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 1.7e-120 436.8 330 67.0
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 2.9e-120 436.0 315 69.8
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 1.1e-119 434.1 347 64.6
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 2.5e-119 433.0 312 70.8
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 2.5e-119 433.0 317 69.4
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 2.5e-119 433.0 319 70.2
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 3.2e-119 432.6 305 70.2
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 7.2e-119 431.4 312 70.8
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 9.4e-119 431.0 326 67.5
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 9.4e-119 431.0 330 66.7
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 6.1e-118 428.3 321 69.5
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 7.9e-118 427.9 339 66.1
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 2.3e-117 426.4 307 70.4
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 3.9e-117 425.6 328 68.6
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 3.9e-117 425.6 315 68.9
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 5.1e-117 425.2 360 63.6
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 6.7e-117 424.9 319 68.3
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 1.1e-116 424.1 326 68.4
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 2.6e-116 422.9 308 69.2
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 3.7e-115 419.1 319 67.4
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 6.3e-115 418.3 329 66.6
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 8.2e-115 417.9 305 70.2
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 4.1e-114 415.6 329 66.6
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 9.1e-114 414.5 329 66.3
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 2.0e-113 413.3 304 69.7
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 2.6e-113 412.9 360 61.4
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 3.5e-113 412.5 306 70.3
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.7e-112 410.2 316 64.6
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 5.0e-112 408.7 306 69.3
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 3.2e-111 406.0 330 61.5
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 7.2e-111 404.8 368 62.0
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 9.4e-111 404.4 281 73.3
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 9.4e-111 404.4 311 69.1
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 1.2e-110 404.1 291 70.4
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 6.1e-110 401.7 321 66.0
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 2.3e-109 399.8 358 59.8
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 1.4e-106 390.6 327 62.4
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 5.3e-106 388.7 315 60.0
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 1.1e-103 380.9 304 62.8
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 2.5e-103 379.8 409 53.3
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 9.4e-103 377.9 296 66.9
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 1.6e-102 377.1 288 66.7
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 3.4e-100 369.4 321 60.7
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 8.3e-99 364.8 294 62.6
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 8.3e-99 364.8 307 59.3
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 5.4e-98 362.1 314 58.3
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 1.5e-95 354.0 256 73.0
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 3.0e-93 346.3 306 59.5
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 3.4e-92 342.8 318 58.5
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 3.4e-92 342.8 281 60.9
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 2.2e-91 340.1 334 54.2
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 4.7e-86 322.4 217 75.6
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 8.0e-86 321.6 241 69.7
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 1.9e-79 300.4 228 69.3
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 2.4e-74 283.5 230 67.0
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 4.1e-74 282.7 198 72.2
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 3.0e-72 276.6 212 65.1
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 1.6e-70 270.8 337 46.0
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 4.7e-70 269.2 294 53.4
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 2.6e-68 263.5 315 48.6
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 4.4e-68 262.7 321 44.9
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 2.2e-59 233.8 301 45.2
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 6.4e-59 232.3 273 46.5
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 7.6e-52 208.8 279 43.7
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 2.2e-51 207.2 175 57.7
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 1.0e-48 198.4 344 37.5
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 2.4e-42 177.2 129 65.9
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 3.4e-28 130.2 103 62.1
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 3.4e-28 130.2 103 62.1
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 1.9e-26 124.4 98 56.1
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 4.2e-26 123.2 107 59.8
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 4.1e-21 106.7 90 55.6
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 9.0e-21 105.5 98 53.1
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 9.0e-21 105.5 98 53.1
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 7.6e-20 102.4 98 51.0
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 5.1e-16 89.7 95 51.6
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 5.9e-12 76.3 51 70.6
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 3.6e-09 67.0 64 48.4


User provided reference genes

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