Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G522.10 Capsicum annuum HOM05D006658 ORTHO05D008515 5.6e-212 740.7 388 100.0
Sopen01g032090 Solanum pennellii HOM05D006658 ORTHO05D008515 1.8e-189 666.0 390 91.8
Solyc01g080300.4 Solanum lycopersicum HOM05D006658 ORTHO05D008515 3.3e-188 661.8 390 91.5
PGSC0003DMG400004353 Solanum tuberosum HOM05D006658 ORTHO05D008515 6.3e-187 657.5 390 90.5
Nitab4.5_0003070g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008515 3.1e-178 628.6 421 81.7
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 7.4e-172 607.4 392 84.9
Cc03_g02920 Coffea canephora HOM05D006658 ORTHO05D008515 3.6e-134 482.3 364 70.3
MSTRG.24762 Avicennia marina HOM05D006658 ORTHO05D008515 1.5e-127 460.3 376 65.7
vmacro15292 Vaccinium macrocarpon HOM05D006658 ORTHO05D008515 1.9e-127 459.9 391 65.7
Migut.N00139 Erythranthe guttata HOM05D006658 ORTHO05D008515 2.1e-126 456.4 335 70.7
SGA_v2.0_scaffold107G30765 Striga asiatica HOM05D006658 ORTHO05D008515 2.3e-125 453.0 340 70.6
Rhsim02G0017700 Rhododendron simsii HOM05D006658 ORTHO05D008515 5.2e-125 451.8 389 64.5
SalBow5G3198 Salvia bowleyana HOM05D006658 ORTHO05D008515 4.9e-123 445.3 330 70.3
Dinv38362 Davidia involucrata HOM05D006658 ORTHO05D008515 9.2e-122 441.0 389 62.7
Actinidia00076 Actinidia chinensis HOM05D006658 ORTHO05D008515 1.2e-121 440.7 384 63.0
Lsat_1_v5_gn_5_165480 Lactuca sativa HOM05D006658 ORTHO05D008515 7.3e-119 431.4 384 60.2
Sc13g0003830 Simmondsia chinensis HOM05D006658 ORTHO05D008515 1.6e-118 430.3 382 61.5
Cfa015553 Carpinus fangiana HOM05D006658 ORTHO05D008515 2.3e-117 426.4 373 62.5
Haze_00994 Corylus avellana HOM05D006658 ORTHO05D008515 5.2e-117 425.2 377 61.8
Manes.15G021400 Manihot esculenta HOM05D006658 ORTHO05D008515 8.9e-117 424.5 330 67.6
CiPaw.02G090200 Carya illinoinensis HOM05D006658 ORTHO05D008515 1.5e-116 423.7 376 61.2
TAR365G0289 Trochodendron aralioides HOM05D006658 ORTHO05D008515 1.5e-116 423.7 395 59.5
HanXRQChr12g0359491 Helianthus annuus HOM05D006658 ORTHO05D008515 7.5e-116 421.4 381 60.1
CANSAT78G1897 Cannabis sativa HOM05D006658 ORTHO05D008515 2.2e-115 419.9 373 62.2
Ciclev10005116m.g Citrus clementina HOM05D006658 ORTHO05D008515 2.9e-115 419.5 374 60.7
TWI53G0915 Tripterygium wilfordii HOM05D006658 ORTHO05D008515 8.3e-115 417.9 371 62.3
Aqoxy2G03225 Aquilegia oxysepala HOM05D006658 ORTHO05D008515 1.1e-114 417.5 350 63.7
PSO170G4721 Papaver somniferum HOM05D006658 ORTHO05D008515 1.1e-114 417.5 372 60.5
RcHm_v2.0_Chr4g0419051 Rosa chinensis HOM05D006658 ORTHO05D008515 1.4e-114 417.2 382 59.2
Sed0019307 Sechium edule HOM05D006658 ORTHO05D008515 1.9e-114 416.8 330 64.8
GSVIVG01017866001 Vitis vinifera HOM05D006658 ORTHO05D008515 1.9e-114 416.8 404 57.7
MELO3C021391.2 Cucumis melo HOM05D006658 ORTHO05D008515 4.1e-114 415.6 337 63.2
CsaV3_6G005460 Cucumis sativus L. HOM05D006658 ORTHO05D008515 1.2e-113 414.1 337 63.5
MBI17_g29609_MAGBIO Magnolia biondii HOM05D006658 ORTHO05D008515 1.2e-113 414.1 387 61.0
Potri.008G199900 Populus trichocarpa HOM05D006658 ORTHO05D008515 1.6e-113 413.7 333 63.7
MD13G1180000 Malus domestica HOM05D006658 ORTHO05D008515 2.1e-113 413.3 337 63.5
QL06p005937 Quercus lobata HOM05D006658 ORTHO05D008515 2.1e-113 413.3 398 57.8
FvH4_4g14170 Fragaria vesca HOM05D006658 ORTHO05D008515 3.5e-113 412.5 382 59.2
Eucgr.E03351 Eucalyptus grandis HOM05D006658 ORTHO05D008515 6.0e-113 411.8 360 60.3
FAN12G0854 Fragaria x ananassa HOM05D006658 ORTHO05D008515 6.0e-113 411.8 381 58.8
DCAR_027140 Daucus carota HOM05D006658 ORTHO05D008515 1.0e-112 411.0 357 62.7
Lalb_Chr15g0087271 Lupinus albus HOM05D006658 ORTHO05D008515 1.3e-112 410.6 377 58.1
PSO407G0441 Papaver somniferum HOM05D006658 ORTHO05D008515 1.7e-112 410.2 314 67.5
Atru.chr4.2671 Acer truncatum HOM05D006658 ORTHO05D008515 2.3e-112 409.8 379 59.9
ClCG06G005690 Citrullus lanatus HOM05D006658 ORTHO05D008515 3.3e-111 406.0 386 57.5
Thecc.04G218900 Theobroma cacao HOM05D006658 ORTHO05D008515 4.3e-111 405.6 347 62.0
Gorai.006G218300 Gossypium raimondii HOM05D006658 ORTHO05D008515 5.6e-111 405.2 343 61.5
AT3G21580 Arabidopsis thaliana HOM05D006658 ORTHO05D008515 1.6e-110 403.7 385 58.4
PGR065G0004 Punica granatum HOM05D006658 ORTHO05D008515 1.6e-110 403.7 380 57.6
Phvul.006G155900 Phaseolus vulgaris HOM05D006658 ORTHO05D008515 2.8e-110 402.9 364 58.2
Glyma.15G101900 Glycine max HOM05D006658 ORTHO05D008515 4.7e-110 402.1 332 62.0
Prupe.1G148500 Prunus persica HOM05D006658 ORTHO05D008515 6.2e-110 401.7 387 57.9
Cpa.g.sc16.52 Carica papaya HOM05D006658 ORTHO05D008515 1.1e-109 401.0 359 59.9
Sabra08G0161000 Salix brachista HOM05D006658 ORTHO05D008515 1.1e-109 401.0 379 58.8
Carub.0003s2162 Capsella rubella HOM05D006658 ORTHO05D008515 1.4e-109 400.6 382 57.3
CARHR097540 Cardamine hirsuta HOM05D006658 ORTHO05D008515 3.1e-109 399.4 378 57.1
arahy.Tifrunner.gnm1.ann1.V9Y9T8 Arachis hypogaea HOM05D006658 ORTHO05D008515 8.9e-109 397.9 389 55.8
Os05g0400600 Oryza sativa ssp. japonica HOM05D006658 ORTHO05D008515 1.2e-108 397.5 347 58.2
BcaB04g19174 Brassica carinata HOM05D006658 ORTHO05D008515 1.5e-108 397.1 390 56.4
AL3G35700 Arabidopsis lyrata HOM05D006658 ORTHO05D008515 4.4e-108 395.6 384 56.2
Thhalv10020897m.g Eutrema salsugineum HOM05D006658 ORTHO05D008515 4.4e-108 395.6 306 65.4
VMungo0540G0090 Vigna mungo HOM05D006658 ORTHO05D008515 4.4e-108 395.6 339 60.8
A03p42320 Brassica napus HOM05D006658 ORTHO05D008515 6.4e-107 391.7 349 60.2
BraA03t13384Z Brassica rapa HOM05D006658 ORTHO05D008515 6.4e-107 391.7 349 60.2
Sp3g19610 Schrenkiella parvula HOM05D006658 ORTHO05D008515 1.1e-106 391.0 319 63.3
BcaC01g03498 Brassica carinata HOM05D006658 ORTHO05D008515 2.4e-106 389.8 319 63.6
arahy.Tifrunner.gnm1.ann1.Q3CYV3 Arachis hypogaea HOM05D006658 ORTHO05D008515 4.2e-106 389.0 389 54.2
Ca_00605_v3 Cicer arietinum L. HOM05D000887 ORTHO05D000908 5.4e-106 388.7 346 58.1
FAN07G2752 Fragaria x ananassa HOM05D006658 ORTHO05D008515 7.1e-106 388.3 413 54.2
Zm00001eb346810 Zea mays HOM05D006658 ORTHO05D008515 1.2e-105 387.5 390 53.3
Aa31sc174G10 Aethionema arabicum HOM05D006658 ORTHO05D008515 1.6e-105 387.1 352 57.7
Medtr2g021220 Medicago truncatula HOM05D006658 ORTHO05D008515 6.0e-105 385.2 341 58.9
Lj6g0017983 Lotus japonicus HOM05D006658 ORTHO05D008515 1.7e-104 383.6 321 61.4
THA.LOC104820222 Tarenaya hassleriana HOM05D006658 ORTHO05D008515 2.3e-104 383.3 350 59.4
ATR0626G018 Amborella trichopoda HOM05D006658 ORTHO05D007095 3.9e-104 382.5 318 61.6
TPR.G28916 Trifolium pratense HOM05D000887 ORTHO05D000908 3.9e-104 382.5 334 59.6
BolC3t17462H Brassica oleracea HOM05D006658 ORTHO05D008515 1.9e-103 380.2 319 62.4
C03p51780 Brassica napus HOM05D006658 ORTHO05D008515 5.6e-103 378.6 378 55.6
HPP92_001401 Vanilla planifolia HOM05D006658 ORTHO05D008515 9.6e-103 377.9 304 62.8
EL10Ac4g08937 Beta vulgaris HOM05D006658 ORTHO05D008515 4.8e-102 375.6 369 59.9
Duzib212G0844 Durio zibethinus HOM05D006658 ORTHO05D008515 3.8e-99 365.9 313 62.9
COL.COLO4_21620 Corchorus olitorius HOM05D006658 ORTHO05D008515 4.2e-98 362.5 358 56.1
SEGI_40702 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 7.1e-98 361.7 305 60.3
unitig_61.g26008 Utricularia gibba HOM05D006658 ORTHO05D008515 1.9e-95 353.6 313 61.3
FAN22G2256 Fragaria x ananassa HOM05D006658 ORTHO05D008515 9.6e-95 351.3 256 69.5
Nn4g26153 Nelumbo nucifera HOM05D006658 ORTHO05D008515 1.6e-94 350.5 339 56.9
Gohir.D09G194900 Gossypium hirsutum HOM05D006658 ORTHO05D008515 2.8e-94 349.7 343 56.0
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 5.3e-93 345.5 346 63.3
Gohir.A09G200700 Gossypium hirsutum HOM05D006658 ORTHO05D008515 7.6e-92 341.7 343 55.4
CSS0022396 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 7.1e-90 335.1 244 70.1
ECA234G3592 Erigeron canadensis HOM05D006658 ORTHO05D008515 1.6e-89 334.0 230 73.9
PGR004G0022 Punica granatum HOM05D006658 ORTHO05D008515 1.6e-89 334.0 325 56.3
Psat5g176560 Pisum sativum HOM05D006658 ORTHO05D008515 3.0e-88 329.7 357 51.0
CDE02G1914 Ceratophyllum demersum HOM05D006658 ORTHO05D008515 3.9e-88 329.3 357 52.1
Pp3c16_5660 Physcomitrium patens HOM05D006658 ORTHO05D008515 5.6e-87 325.5 303 53.1
AUR62004779 Chenopodium quinoa HOM05D006658 ORTHO05D008515 1.3e-86 324.3 364 54.1
RcHm_v2.0_Chr2g0086241 Rosa chinensis HOM05D006658 ORTHO05D008515 7.6e-84 315.1 331 54.1
Mapoly0015s0173 Marchantia polymorpha HOM05D006658 ORTHO05D008515 4.9e-83 312.4 344 47.7
Ah.06g191650 Amaranthus hybridus HOM05D006658 ORTHO05D008515 2.5e-82 310.1 277 62.1
SMO361G0230 Selaginella moellendorffii HOM05D006658 ORTHO05D008515 3.9e-80 302.8 376 43.9
Lj3A803G20 Lonicera japonica HOM05D006658 ORTHO05D008515 6.2e-78 295.4 293 56.7
Glyma.13G210900 Glycine max HOM05D006658 ORTHO05D008515 6.1e-73 278.9 293 52.6
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.0e-72 278.1 272 49.3
RcHm_v2.0_Chr5g0064291 Rosa chinensis HOM05D006658 ORTHO05D008515 6.3e-70 268.9 197 70.1
CDE09G1086 Ceratophyllum demersum HOM05D002356 ORTHO05D002546 1.4e-66 257.7 288 51.4
AUR62003399 Chenopodium quinoa HOM05D006658 ORTHO05D008515 1.0e-64 251.5 268 56.0
Psat1g186040 Pisum sativum HOM05D006658 ORTHO05D008515 1.5e-63 247.7 185 66.5
CSS0004357 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 1.8e-61 240.7 227 58.1
Hund26050 Selenicereus undatus HOM05D006658 ORTHO05D008515 5.9e-60 235.7 246 56.5
RcHm_v2.0_Chr5g0045591 Rosa chinensis HOM05D006658 ORTHO05D008515 2.5e-58 230.3 178 67.4
Manes.07G121800 Manihot esculenta HOM05D006658 ORTHO05D008515 6.7e-56 222.2 159 72.3
Nn1g02127 Nelumbo nucifera HOM05D006658 ORTHO05D008515 3.3e-55 219.9 200 62.0
Cre12.g533950 Chlamydomonas reinhardtii HOM05D006658 ORTHO05D008515 2.2e-54 217.2 304 38.8
Peaxi162Scf00095g00724 Petunia axillaris HOM05D006658 ORTHO05D008515 1.5e-47 194.5 211 57.3
PRCOL_00004089 Prasinoderma coloniale HOM05D006658 ORTHO05D008515 5.3e-45 186.0 280 37.9
MCO01G250 Micromonas commoda HOM05D006658 ORTHO05D008515 6.1e-41 172.6 292 33.9
SEGI_22040 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 1.7e-38 164.5 137 61.3
Oeu023652.1 Olea europaea HOM05D006658 ORTHO05D008515 5.2e-32 142.9 224 46.0
HPP92_001340 Vanilla planifolia HOM05D006658 ORTHO05D008515 2.1e-25 120.9 105 58.1
Actinidia32371 Actinidia chinensis HOM05D006658 ORTHO05D008515 3.4e-23 113.6 84 73.8
Actinidia08452 Actinidia chinensis HOM05D006658 ORTHO05D008515 2.9e-22 110.5 84 70.2
Psat2g070960 Pisum sativum HOM05D006658 ORTHO05D008515 2.4e-21 107.5 240 34.2
Oeu037664.1 Olea europaea HOM05D006658 ORTHO05D008515 8.9e-16 89.0 123 46.3
HanXRQChr09g0256171 Helianthus annuus HOM05D006658 ORTHO05D008515 1.2e-12 78.6 62 61.3
HanXRQChr04g0123631 Helianthus annuus HOM05D034347 ORTHO05D227534 2.6e-07 60.8 45 68.9


User provided reference genes

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