Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G520.10 Capsicum annuum HOM05D000007 ORTHO05D000017 1.2e-73 279.6 130 100.0
CAN.G1034.48 Capsicum annuum HOM05D000007 ORTHO05D000017 2.6e-44 182.2 119 71.4
CAN.G2122.5 Capsicum annuum HOM05D000007 ORTHO05D000017 7.5e-44 180.6 131 67.9
CAN.G160.13 Capsicum annuum HOM05D000007 ORTHO05D000017 8.6e-40 167.2 126 66.7
CAN.G520.23 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-31 140.2 85 81.2
CAN.G1652.19 Capsicum annuum HOM05D000007 ORTHO05D000017 2.0e-28 129.4 75 74.7
Nitab4.5_0004725g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 8.1e-22 107.5 115 53.0
Nitab4.5_0000437g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.0e-20 102.8 113 49.6
Nitab4.5_0001668g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.4e-20 102.1 119 45.4
PGSC0003DMG400010705 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.4e-20 101.7 118 47.5
PGSC0003DMG400038354 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.4e-20 101.7 120 40.8
Nitab4.5_0001088g0160 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.8e-20 101.3 118 46.6
CAN.G696.5 Capsicum annuum HOM05D001580 ORTHO05D000017 7.6e-20 100.9 114 48.2
CAN.G181.19 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-19 100.1 116 48.3
Nitab4.5_0002499g0170 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.4e-19 97.8 112 45.5
CAN.G851.36 Capsicum annuum HOM05D000007 ORTHO05D000017 8.4e-19 97.4 113 43.4
CAN.G1703.14 Capsicum annuum HOM05D000007 ORTHO05D000017 1.4e-18 96.7 115 47.8
Nitab4.5_0015235g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-18 96.7 117 45.3
PGSC0003DMG400043483 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.9e-18 96.3 122 40.2
CAN.G1121.7 Capsicum annuum HOM05D000007 ORTHO05D000017 2.4e-18 95.9 128 40.6
PGSC0003DMG400004721 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.2e-18 95.5 120 44.2
PGSC0003DMG400036000 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.2e-18 95.5 115 40.9
CAN.G488.27 Capsicum annuum HOM05D000007 ORTHO05D000017 5.4e-18 94.7 121 46.3
CAN.G575.102 Capsicum annuum HOM05D000007 ORTHO05D000017 5.4e-18 94.7 116 47.4
PGSC0003DMG400003869 Solanum tuberosum HOM05D000007 ORTHO05D000017 7.1e-18 94.4 118 46.6
CAN.G1565.4 Capsicum annuum HOM05D000007 ORTHO05D000017 9.2e-18 94.0 116 46.6
PGSC0003DMG400043742 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.2e-18 94.0 133 38.3
CAN.G575.77 Capsicum annuum HOM05D000007 ORTHO05D000017 1.2e-17 93.6 116 47.4
PGSC0003DMG400034923 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.6e-17 93.2 117 43.6
PGSC0003DMG400042553 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.6e-17 93.2 122 40.2
CAN.G575.119 Capsicum annuum HOM05D000007 ORTHO05D000017 2.7e-17 92.4 116 46.6
PGSC0003DMG400040151 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.7e-17 92.4 118 39.8
CAN.G484.1 Capsicum annuum HOM05D000007 ORTHO05D000017 3.5e-17 92.0 116 44.8
PGSC0003DMG400029801 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.6e-17 91.7 118 47.5
PGSC0003DMG401013254 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.6e-17 91.7 119 44.5
CAN.G222.162 Capsicum annuum HOM05D000007 ORTHO05D000017 1.7e-16 89.7 119 39.5
PGSC0003DMG400013260 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.3e-16 89.4 117 43.6
PGSC0003DMG400022273 Solanum tuberosum HOM05D000007 ORTHO05D000949 2.3e-16 89.4 137 40.9
CAN.G222.149 Capsicum annuum HOM05D001173 ORTHO05D000017 3.9e-16 88.6 125 40.0
CAN.G1121.8 Capsicum annuum HOM05D000007 ORTHO05D000017 5.1e-16 88.2 120 41.7
CAN.G1375.11 Capsicum annuum HOM05D000007 ORTHO05D000017 5.1e-16 88.2 114 44.7
CAN.G2177.13 Capsicum annuum HOM05D000007 ORTHO05D000017 6.6e-16 87.8 116 45.7
Nitab4.5_0001198g0090 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.6e-16 87.8 121 47.1
CAN.G1134.13 Capsicum annuum HOM05D000176 ORTHO05D000017 8.7e-16 87.4 54 66.7
CAN.G575.137 Capsicum annuum HOM05D000007 ORTHO05D000017 8.7e-16 87.4 116 44.8
PGSC0003DMG400023430 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.1e-15 87.0 116 41.4
CAN.G575.76 Capsicum annuum HOM05D000007 ORTHO05D000017 1.5e-15 86.7 115 47.0
Nitab4.5_0007853g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.5e-15 86.7 81 53.1
PGSC0003DMG400013376 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.5e-15 85.9 110 43.6
PGSC0003DMG400021641 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.5e-15 85.9 126 43.7
PGSC0003DMG400040830 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.5e-15 85.9 119 45.4
Sopen11g007270 Solanum pennellii HOM05D000007 ORTHO05D000017 3.3e-15 85.5 116 41.4
Solyc11g012540.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 4.3e-15 85.1 116 40.5
CAN.G1126.11 Capsicum annuum HOM05D000007 ORTHO05D000017 7.3e-15 84.3 112 39.3
CAN.G484.2 Capsicum annuum HOM05D000007 ORTHO05D000017 9.6e-15 84.0 115 43.5
CAN.G488.23 Capsicum annuum HOM05D000007 ORTHO05D000017 9.6e-15 84.0 72 55.6
CAN.G575.75 Capsicum annuum HOM05D000007 ORTHO05D000017 2.1e-14 82.8 98 45.9
Nitab4.5_0004725g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.1e-14 82.8 114 43.0
CAN.G884.13 Capsicum annuum HOM05D000007 ORTHO05D000017 3.6e-14 82.0 119 42.0
PGSC0003DMG400007423 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.6e-14 82.0 146 35.6
PGSC0003DMG400013272 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.6e-14 82.0 121 42.1
PGSC0003DMG400007431 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.8e-14 81.6 134 37.3
CAN.G375.46 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-13 80.5 70 54.3
Sopen11g007280 Solanum pennellii HOM05D000007 ORTHO05D000017 1.4e-13 80.1 113 40.7
PGSC0003DMG400025404 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.4e-13 80.1 122 43.4
PGSC0003DMG400013291 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.8e-13 79.7 110 39.1
Sopen09g001450 Solanum pennellii HOM05D000007 ORTHO05D000017 2.4e-13 79.3 118 41.5
Sopen09g001370 Solanum pennellii HOM05D000007 ORTHO05D000017 5.3e-13 78.2 117 41.9
CAN.G645.21 Capsicum annuum HOM05D000007 ORTHO05D000017 9.0e-13 77.4 113 38.9
Nitab4.5_0002499g0190 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.5e-12 76.6 87 50.6
CAN.G623.50 Capsicum annuum HOM05D000007 ORTHO05D000017 2.0e-12 76.3 101 44.6
Nitab4.5_0000271g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.0e-12 76.3 130 40.0
Nitab4.5_0011094g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.0e-12 76.3 114 40.4
PGSC0003DMG400013290 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.0e-12 76.3 64 54.7
PGSC0003DMG400039496 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.6e-12 75.9 95 41.1
PGSC0003DMG400040257 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.6e-12 75.9 97 43.3
CAN.G424.43 Capsicum annuum HOM05D000007 ORTHO05D000017 4.4e-12 75.1 115 40.0
Sopen11g007290 Solanum pennellii HOM05D000007 ORTHO05D000017 4.4e-12 75.1 112 36.6
Nitab4.5_0007673g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.8e-12 74.7 116 39.7
Sopen11g004020 Solanum pennellii HOM05D000007 ORTHO05D000017 9.9e-12 73.9 133 31.6
Nitab4.5_0000143g0320 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.3e-11 73.6 120 40.8
Solyc09g150103.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.3e-11 73.6 132 37.9
Solyc11g012560.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.3e-11 73.6 112 35.7
Sopen11g004110 Solanum pennellii HOM05D000007 ORTHO05D000017 1.3e-11 73.6 133 31.6
Nitab4.5_0001114g0120 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.8e-11 72.0 103 40.8
Solyc09g005480.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 3.8e-11 72.0 117 40.2
Nitab4.5_0000053g0050 Nicotiana tabacum HOM05D000530 ORTHO05D000017 4.9e-11 71.6 132 38.6
CAN.G1799.4 Capsicum annuum HOM05D000007 ORTHO05D000017 6.4e-11 71.2 120 34.2
Nitab4.5_0000519g0240 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.4e-11 71.2 131 38.2
CAN.G1121.10 Capsicum annuum HOM05D000002 ORTHO05D000001 8.4e-11 70.9 69 49.3
Nitab4.5_0001438g0200 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.1e-10 70.5 75 50.7
CAN.G1470.10 Capsicum annuum HOM05D000007 ORTHO05D000017 1.4e-10 70.1 136 35.3
Nitab4.5_0000143g0330 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-10 70.1 117 41.9
Nitab4.5_0019486g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.9e-10 69.7 117 39.3
CAN.G1134.16 Capsicum annuum HOM05D020669 ORTHO05D015553 3.2e-10 68.9 38 78.9
CAN.G1186.44 Capsicum annuum HOM05D000007 ORTHO05D000017 4.2e-10 68.6 93 40.9
CAN.G1557.16 Capsicum annuum HOM05D000007 ORTHO05D000017 4.2e-10 68.6 118 39.8
CAN.G1799.9 Capsicum annuum HOM05D000007 ORTHO05D000017 5.4e-10 68.2 112 36.6
Solyc02g091570.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 5.4e-10 68.2 114 36.0
Sopen11g006650 Solanum pennellii HOM05D000007 ORTHO05D000017 5.4e-10 68.2 66 48.5
CAN.G1579.16 Capsicum annuum HOM05D000007 ORTHO05D000017 7.1e-10 67.8 71 49.3
Nitab4.5_0000519g0140 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.1e-09 66.2 126 39.7
PGSC0003DMG400042854 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.1e-09 66.2 125 37.6
CAN.G1799.7 Capsicum annuum HOM05D000007 ORTHO05D000017 6.0e-09 64.7 68 44.1
PGSC0003DMG400042455 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.0e-08 63.9 124 37.9
PGSC0003DMG400001294 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.3e-08 63.5 128 33.6
PGSC0003DMG400040733 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.7e-08 63.2 128 35.2
CAN.G644.29 Capsicum annuum HOM05D000007 ORTHO05D000017 2.3e-08 62.8 69 44.9
Sopen01g003950 Solanum pennellii HOM05D000007 ORTHO05D000017 3.0e-08 62.4 70 45.7
PGSC0003DMG400028421 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.1e-08 61.6 117 36.8
Nitab4.5_0002050g0180 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.6e-08 61.2 67 43.3
CAN.G623.46 Capsicum annuum HOM05D000007 ORTHO05D000017 8.7e-08 60.8 69 46.4
CAN.G1209.1 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-07 60.5 90 40.0
CAN.G790.17 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-07 60.5 133 32.3
Nitab4.5_0002050g0190 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.1e-07 60.5 68 44.1
CAN.G222.158 Capsicum annuum HOM05D000007 ORTHO05D000017 1.5e-07 60.1 60 46.7
Nitab4.5_0006683g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.5e-07 60.1 127 34.6
CAN.G2177.14 Capsicum annuum HOM05D000007 ORTHO05D000017 1.9e-07 59.7 64 50.0
Nitab4.5_0002499g0180 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.9e-07 59.7 84 41.7
CAN.G473.136 Capsicum annuum HOM05D000007 ORTHO05D000017 2.5e-07 59.3 72 44.4
CAN.G786.31 Capsicum annuum HOM05D000007 ORTHO05D000017 2.5e-07 59.3 83 43.4
Nitab4.5_0000743g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.5e-07 59.3 66 45.5
CAN.G473.149 Capsicum annuum HOM05D000007 ORTHO05D000017 3.3e-07 58.9 129 34.1
PGSC0003DMG400015513 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.3e-07 58.9 67 43.3
Nitab4.5_0003359g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.3e-07 58.5 69 46.4
CAN.G905.30 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-06 57.0 43 53.5
PGSC0003DMG400014896 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.3e-06 57.0 125 36.0
CAN.G1470.6 Capsicum annuum HOM05D000007 ORTHO05D000017 1.6e-06 56.6 48 56.2
Sopen02g032030 Solanum pennellii HOM05D000007 ORTHO05D000017 3.6e-06 55.5 73 39.7
Medtr3g436150 Medicago truncatula HOM05D000007 ORTHO05D000017 4.8e-06 55.1 82 39.0
Peaxi162Scf00231g00224 Petunia axillaris HOM05D000007 ORTHO05D000017 6.2e-06 54.7 68 47.1


User provided reference genes

Program Settings