Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 2.6e-74 282.0 142 100.0
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 4.3e-53 211.5 130 83.8
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 1.6e-52 209.5 130 83.1
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 4.8e-52 208.0 130 82.3
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 6.9e-51 204.1 130 81.5
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 1.2e-50 203.4 130 80.8
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 5.3e-43 177.9 129 73.6
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 1.5e-42 176.4 133 72.2
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 1.3e-36 156.8 133 63.2
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 1.3e-36 156.8 141 59.6
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 3.7e-36 155.2 140 62.1
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 2.4e-35 152.5 133 63.2
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 3.1e-35 152.1 124 66.9
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 7.0e-35 151.0 125 63.2
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 9.1e-35 150.6 140 59.3
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 1.2e-34 150.2 134 61.2
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 1.2e-34 150.2 140 59.3
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 7.7e-34 147.5 137 60.6
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.3e-33 146.7 125 64.0
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 2.9e-33 145.6 125 64.0
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 2.9e-33 145.6 125 63.2
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 8.5e-33 144.1 125 63.2
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 2.5e-32 142.5 130 60.8
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 3.2e-32 142.1 129 58.1
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 4.2e-32 141.7 131 57.3
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 4.2e-32 141.7 132 57.6
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 5.5e-32 141.4 136 59.6
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 9.4e-32 140.6 127 59.1
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 9.4e-32 140.6 127 60.6
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 1.2e-31 140.2 125 58.4
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.6e-31 139.8 125 61.6
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 1.6e-31 139.8 130 53.8
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 3.6e-31 138.7 128 61.7
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 3.6e-31 138.7 129 61.2
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 4.7e-31 138.3 127 59.8
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 4.7e-31 138.3 125 56.8
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 8.0e-31 137.5 130 57.7
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 8.0e-31 137.5 133 59.4
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 1.0e-30 137.1 128 60.2
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.0e-30 137.1 128 60.2
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.0e-30 137.1 128 60.9
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 1.0e-30 137.1 124 60.5
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 1.4e-30 136.7 122 59.0
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 3.0e-30 135.6 127 56.7
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 4.0e-30 135.2 133 55.6
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 4.0e-30 135.2 125 60.8
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 5.2e-30 134.8 123 56.1
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 8.8e-30 134.0 133 55.6
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 8.8e-30 134.0 121 57.0
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 2.6e-29 132.5 121 57.0
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 2.6e-29 132.5 121 57.0
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 2.6e-29 132.5 124 58.9
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 3.3e-29 132.1 123 56.9
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 3.3e-29 132.1 128 57.8
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 1.3e-28 130.2 127 57.5
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 1.7e-28 129.8 130 56.2
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 2.2e-28 129.4 130 56.2
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 2.8e-28 129.0 130 51.5
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 2.8e-28 129.0 127 52.0
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 3.7e-28 128.6 131 55.0
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 3.7e-28 128.6 122 55.7
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 4.8e-28 128.3 127 54.3
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 8.2e-28 127.5 127 52.0
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 8.2e-28 127.5 123 55.3
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 8.2e-28 127.5 123 55.3
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 2.4e-27 125.9 129 49.6
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 2.4e-27 125.9 129 53.5
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 5.3e-27 124.8 124 52.4
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 1.6e-26 123.2 126 51.6
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 1.6e-26 123.2 129 48.8
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 1.6e-26 123.2 130 55.4
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 5.9e-26 121.3 129 48.8
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 1.3e-25 120.2 133 48.1
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 1.7e-25 119.8 133 54.1
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 2.9e-25 119.0 125 50.4
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 2.9e-25 119.0 125 50.4
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 2.9e-25 119.0 125 50.4
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 2.9e-25 119.0 136 50.0
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 3.8e-25 118.6 126 50.0
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 8.5e-25 117.5 129 47.3
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 8.5e-25 117.5 136 49.3
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 1.2e-23 113.6 128 50.0
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 1.6e-23 113.2 118 51.7
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 8.0e-23 110.9 150 45.3
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 1.8e-22 109.8 202 37.1
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 6.8e-22 107.8 136 44.1
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 1.2e-21 107.1 128 46.1
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 1.5e-21 106.7 121 48.8
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 2.0e-21 106.3 123 48.8
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 3.4e-21 105.5 123 50.4
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 3.4e-21 105.5 121 52.1
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 1.7e-20 103.2 126 50.0
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 3.7e-20 102.1 107 50.5
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 1.1e-19 100.5 107 48.6
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 1.1e-19 100.5 141 44.0
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 1.6e-18 96.7 129 47.3
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 3.5e-18 95.5 88 56.8
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 1.3e-17 93.6 126 46.0
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 1.1e-16 90.5 120 44.2
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 1.5e-16 90.1 122 46.7
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 1.2e-15 87.0 121 47.1
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 1.6e-15 86.7 129 38.8
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 2.1e-15 86.3 68 60.3
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 3.6e-15 85.5 69 56.5
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 6.1e-15 84.7 69 58.0
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 2.3e-14 82.8 212 32.1
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 3.1e-11 72.4 121 33.1
SHI33895 Sapria himalayana HOM05D003443 ORTHO05D008640 2.0e-10 69.7 120 35.8
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 1.1e-08 63.9 74 45.9
Actinidia18153 Actinidia chinensis HOM05D003443 ORTHO05D008640 2.1e-07 59.7 61 52.5
Cpa.g.sc36.31 Carica papaya HOM05D003443 ORTHO05D008640 2.1e-07 59.7 100 39.0


User provided reference genes

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