Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 1.1e-235 819.7 462 100.0
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 9.5e-150 534.3 488 68.0
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 3.6e-149 532.3 513 63.4
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 3.0e-143 512.7 489 66.5
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 7.3e-142 508.1 418 70.8
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 5.8e-115 418.7 417 62.6
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 2.0e-83 313.9 500 45.6
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 4.5e-83 312.8 513 45.2
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 7.9e-80 302.0 491 47.0
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 2.3e-79 300.4 512 45.3
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 1.4e-76 291.2 514 45.3
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 7.7e-75 285.4 490 48.0
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 3.6e-72 276.6 475 46.3
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 4.8e-69 266.2 492 44.5
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 2.2e-66 257.3 511 42.5
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 4.7e-64 249.6 471 44.6
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 8.8e-63 245.4 498 40.4
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 1.5e-62 244.6 489 39.7
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.3e-61 241.5 449 43.9
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 3.1e-60 236.9 485 41.9
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 2.7e-59 233.8 485 41.9
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 5.9e-59 232.6 504 41.3
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 1.0e-58 231.9 531 39.7
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 3.8e-58 229.9 491 41.3
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 8.6e-58 228.8 505 41.2
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 1.5e-57 228.0 474 42.0
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 5.5e-57 226.1 508 40.2
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 1.6e-56 224.6 467 41.8
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 1.0e-55 221.9 507 42.2
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 1.5e-54 218.0 504 40.5
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 2.0e-54 217.6 481 39.1
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 8.3e-53 212.2 492 37.8
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 1.8e-52 211.1 527 38.5
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 2.0e-51 207.6 501 36.9
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 2.7e-51 207.2 509 40.9
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 5.9e-51 206.1 475 40.6
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 7.8e-51 205.7 502 38.2
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 7.8e-51 205.7 477 37.3
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 7.8e-51 205.7 477 37.3
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 2.3e-50 204.1 489 39.7
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 9.5e-49 198.7 494 41.9
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 9.5e-49 198.7 469 39.0
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.2e-48 198.4 487 37.2
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 4.7e-48 196.4 475 36.2
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 2.3e-47 194.1 448 38.6
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 6.8e-47 192.6 462 38.3
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 8.9e-47 192.2 489 41.5
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 7.5e-46 189.1 484 36.4
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 9.8e-46 188.7 476 37.2
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 2.2e-45 187.6 448 40.4
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 1.2e-43 181.8 485 38.1
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 4.6e-43 179.9 511 35.8
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 4.6e-43 179.9 427 38.6
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 7.8e-43 179.1 487 37.8
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.5e-41 174.9 478 37.2
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 3.3e-41 173.7 450 38.9
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 2.1e-40 171.0 488 35.5
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 1.8e-39 167.9 509 36.7
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 4.0e-39 166.8 279 43.4
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 5.2e-39 166.4 474 37.6
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 5.2e-39 166.4 401 40.6
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 8.9e-39 165.6 488 34.8
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 8.3e-37 159.1 443 35.7
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 3.2e-36 157.1 467 38.8
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 4.1e-36 156.8 451 37.0
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 5.4e-36 156.4 550 32.4
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 5.4e-36 156.4 451 33.9
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 9.2e-36 155.6 390 37.4
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 2.0e-35 154.5 464 35.1
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 2.0e-35 154.5 456 36.4
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 4.6e-35 153.3 460 37.8
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 6.0e-35 152.9 445 35.5
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 6.0e-35 152.9 484 37.6
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 3.9e-34 150.2 466 35.8
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 5.0e-34 149.8 452 34.1
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 5.0e-34 149.8 507 35.1
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 1.1e-33 148.7 297 40.4
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 1.9e-33 147.9 474 34.2
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 4.3e-33 146.7 431 33.2
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 7.3e-33 146.0 439 35.1
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 4.7e-32 143.3 472 37.1
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 2.3e-31 141.0 122 64.8
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 2.9e-29 134.0 455 34.7
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 8.3e-29 132.5 233 45.5
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 1.1e-28 132.1 397 35.5
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 3.2e-28 130.6 457 35.0
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 3.2e-28 130.6 367 36.5
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 3.2e-28 130.6 213 41.3
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 2.7e-27 127.5 453 33.8
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 1.7e-26 124.8 626 29.7
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 3.0e-26 124.0 458 34.3
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 3.0e-26 124.0 434 32.7
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 3.0e-26 124.0 486 32.3
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 6.6e-26 122.9 433 33.3
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 5.6e-25 119.8 467 36.2
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 7.3e-25 119.4 347 34.9
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 8.9e-23 112.5 325 34.8
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 8.9e-23 112.5 322 35.1
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 1.5e-22 111.7 207 41.5
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 2.6e-22 110.9 445 31.7
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 2.9e-21 107.5 459 31.4
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 6.4e-21 106.3 172 45.3
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 8.4e-21 105.9 366 35.5
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 3.5e-19 100.5 352 31.8
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.7e-18 98.2 71 70.4
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 3.3e-17 94.0 77 66.2
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 9.6e-17 92.4 444 33.8
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 1.2e-16 92.0 477 31.9
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 2.1e-16 91.3 414 30.4
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 3.6e-16 90.5 442 34.4
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 1.1e-15 89.0 175 41.7
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 1.4e-15 88.6 604 28.6
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 1.3e-13 82.0 438 32.0
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.4e-12 78.6 113 42.5
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 3.2e-12 77.4 265 33.6
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 6.0e-11 73.2 426 30.3
SGA_v2.0_scaffold66G22360 Striga asiatica HOM05D006326 ORTHO05D007589 4.3e-09 67.0 452 27.9
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 5.8e-06 56.6 396 30.8


User provided reference genes

Program Settings