Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G508.29 Capsicum annuum HOM05D000312 ORTHO05D000221 2.2e-177 625.5 326 100.0
Nitab4.5_0004571g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 8.7e-49 198.4 303 43.6
Peaxi162Scf00128g00015 Petunia axillaris HOM05D000312 ORTHO05D000221 1.8e-41 174.1 291 41.9
Peaxi162Scf00158g00012 Petunia axillaris HOM05D000312 ORTHO05D000221 1.5e-37 161.0 175 54.3
CAN.G363.19 Capsicum annuum HOM05D000312 ORTHO05D000221 1.0e-36 158.3 178 47.8
CAN.G1690.13 Capsicum annuum HOM05D000312 ORTHO05D000221 8.5e-36 155.2 176 51.1
Sopen05g004310 Solanum pennellii HOM05D000312 ORTHO05D000221 8.5e-36 155.2 177 53.1
Solyc05g008470.3 Solanum lycopersicum HOM05D000312 ORTHO05D000221 6.1e-34 149.1 177 51.4
Sopen05g004300 Solanum pennellii HOM05D000312 ORTHO05D000221 9.7e-32 141.7 309 37.2
Nitab4.5_0004055g0040 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.7e-31 141.0 291 36.8
Peaxi162Scf00015g02319 Petunia axillaris HOM05D000312 ORTHO05D000221 6.3e-31 139.0 293 36.9
Nitab4.5_0000914g0270 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.4e-30 137.9 307 36.8
Peaxi162Scf00015g02411 Petunia axillaris HOM05D000312 ORTHO05D000221 1.0e-28 131.7 222 43.2
PGSC0003DMG400013519 Solanum tuberosum HOM05D000312 ORTHO05D000221 3.9e-25 119.8 208 39.4
Nitab4.5_0005173g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 6.7e-25 119.0 219 39.3
Nitab4.5_0003345g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.3e-24 116.7 211 37.9
CAN.G508.28 Capsicum annuum HOM05D000312 ORTHO05D000221 5.7e-24 115.9 72 84.7
Nitab4.5_0025730g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.1e-22 110.2 278 33.1
CAN.G1602.1 Capsicum annuum HOM05D000312 ORTHO05D000221 3.5e-21 106.7 182 40.7
CAN.G996.19 Capsicum annuum HOM05D000188 ORTHO05D000362 4.5e-21 106.3 115 53.0
Nitab4.5_0005173g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.5e-21 106.3 278 32.7
CAN.G1339.1 Capsicum annuum HOM05D000312 ORTHO05D000221 1.7e-20 104.4 306 30.1
Nitab4.5_0004766g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 6.5e-20 102.4 153 43.1
Nitab4.5_0002374g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.5e-19 100.5 308 30.8
PGSC0003DMG400042076 Solanum tuberosum HOM05D000312 ORTHO05D000221 4.2e-19 99.8 113 51.3
Peaxi162Scf00026g01611 Petunia axillaris HOM05D000312 ORTHO05D000221 3.6e-18 96.7 183 37.7
Nitab4.5_0003306g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.0e-17 93.6 275 30.5
CAN.G996.24 Capsicum annuum HOM05D000312 ORTHO05D000221 1.7e-15 87.8 219 32.4
Peaxi162Scf00015g02410 Petunia axillaris HOM05D000312 ORTHO05D000221 1.4e-14 84.7 126 49.2
Dinv15562 Davidia involucrata HOM05D000312 ORTHO05D000221 1.7e-12 77.8 152 33.6
HanXRQChr12g0373691 Helianthus annuus HOM05D000312 ORTHO05D000221 6.5e-12 75.9 220 27.3
CAN.G135.61 Capsicum annuum HOM05D007560 ORTHO05D005947 1.5e-11 74.7 73 54.8
Hma1.2p1_0148F.1_g066000 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 4.7e-10 69.7 257 26.1
Lsat_1_v5_gn_4_16880 Lactuca sativa HOM05D000312 ORTHO05D000221 6.1e-10 69.3 212 30.2
Dinv16568 Davidia involucrata HOM05D001046 ORTHO05D000221 8.0e-10 68.9 153 30.7
Rhsim12G0067500 Rhododendron simsii HOM05D000312 ORTHO05D000221 8.0e-10 68.9 174 25.9
HanXRQChr17g0568471 Helianthus annuus HOM05D000312 ORTHO05D000221 1.0e-09 68.6 224 26.3
Lsat_1_v5_gn_1_81120 Lactuca sativa HOM05D000312 ORTHO05D000221 1.8e-09 67.8 223 26.9
HanXRQChr01g0017111 Helianthus annuus HOM05D000312 ORTHO05D000221 2.3e-09 67.4 241 26.6
Actinidia31916 Actinidia chinensis HOM05D000312 ORTHO05D000221 3.0e-09 67.0 186 26.9
Cc11_g11160 Coffea canephora HOM05D000312 ORTHO05D000221 3.0e-09 67.0 178 27.5
CSS0048385 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 5.2e-09 66.2 185 25.9
HanXRQChr01g0019091 Helianthus annuus HOM05D000312 ORTHO05D000221 8.8e-09 65.5 207 27.1
Rhsim12G0067900 Rhododendron simsii HOM05D000312 ORTHO05D000221 8.8e-09 65.5 190 26.8
HanXRQChr17g0568441 Helianthus annuus HOM05D000312 ORTHO05D000221 2.0e-08 64.3 130 31.5
MD05G1157700 Malus domestica HOM05D000312 ORTHO05D000221 2.6e-08 63.9 213 27.7
Cc11_g11170 Coffea canephora HOM05D000312 ORTHO05D000221 3.4e-08 63.5 185 28.6
Lsat_1_v5_gn_1_81201 Lactuca sativa HOM05D000312 ORTHO05D000221 3.4e-08 63.5 232 25.9
CSS0045942 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 5.7e-08 62.8 173 26.0
Actinidia24036 Actinidia chinensis HOM05D000312 ORTHO05D000221 7.5e-08 62.4 137 27.7
Lsat_1_v5_gn_4_16820 Lactuca sativa HOM05D000312 ORTHO05D000221 7.5e-08 62.4 245 28.2
Dinv16567 Davidia involucrata HOM05D000312 ORTHO05D000221 9.8e-08 62.0 139 28.8
Peaxi162Scf00015g00249 Petunia axillaris HOM05D000312 ORTHO05D000221 1.3e-07 61.6 184 33.2
Dinv34662 Davidia involucrata HOM05D000312 ORTHO05D000221 1.7e-07 61.2 208 27.4
CAN.G112.5 Capsicum annuum HOM05D000002 ORTHO05D000001 2.2e-07 60.8 64 51.6
HanXRQChr16g0528701 Helianthus annuus HOM05D000312 ORTHO05D000221 2.2e-07 60.8 226 24.8
Lsat_1_v5_gn_4_16680 Lactuca sativa HOM05D000312 ORTHO05D000221 2.2e-07 60.8 222 27.9
Lsat_1_v5_gn_1_81061 Lactuca sativa HOM05D000312 ORTHO05D012493 2.8e-07 60.5 167 27.5
Dinv27407 Davidia involucrata HOM05D000312 ORTHO05D000221 3.7e-07 60.1 178 27.5
GSVIVG01010161001 Vitis vinifera HOM05D000312 ORTHO05D000221 3.7e-07 60.1 165 32.7
Dinv16565 Davidia involucrata HOM05D000312 ORTHO05D000221 4.8e-07 59.7 158 29.1
Rhsim12G0069000 Rhododendron simsii HOM05D000312 ORTHO05D000221 4.8e-07 59.7 183 23.5
CAN.G1885.1 Capsicum annuum HOM05D000002 ORTHO05D000001 8.3e-07 58.9 38 76.3
HanXRQChr01g0019081 Helianthus annuus HOM05D000312 ORTHO05D000221 8.3e-07 58.9 143 30.1
Lsat_1_v5_gn_4_16921 Lactuca sativa HOM05D000312 ORTHO05D000221 8.3e-07 58.9 233 27.5
Rhsim12G0067600 Rhododendron simsii HOM05D000312 ORTHO05D000221 8.3e-07 58.9 196 23.5
HanXRQChr01g0018881 Helianthus annuus HOM05D000312 ORTHO05D000221 1.1e-06 58.5 158 28.5
Lsat_1_v5_gn_1_81180 Lactuca sativa HOM05D000312 ORTHO05D000221 1.1e-06 58.5 152 29.6
Sopen04g001940 Solanum pennellii HOM05D000312 ORTHO05D000221 1.1e-06 58.5 179 23.5
Hma1.2p1_0189F.1_g082900 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 1.4e-06 58.2 162 26.5
Manes.02G062800 Manihot esculenta HOM05D000312 ORTHO05D000221 1.8e-06 57.8 216 26.9
TAR371G0799 Trochodendron aralioides HOM05D000312 ORTHO05D000221 1.8e-06 57.8 199 26.6
HanXRQChr16g0528451 Helianthus annuus HOM05D000312 ORTHO05D000221 2.4e-06 57.4 216 25.5
Lsat_1_v5_gn_4_16720 Lactuca sativa HOM05D000312 ORTHO05D000221 2.4e-06 57.4 222 23.9
Carub.0001s1325 Capsella rubella HOM05D000312 ORTHO05D000221 3.1e-06 57.0 156 23.7
Lsat_1_v5_gn_6_113140 Lactuca sativa HOM05D000312 ORTHO05D000221 3.1e-06 57.0 202 25.2
Cpa.g.sc70.5 Carica papaya HOM05D000312 ORTHO05D000221 4.1e-06 56.6 210 25.7
Rhsim12G0069300 Rhododendron simsii HOM05D000312 ORTHO05D000221 4.1e-06 56.6 272 23.9
RcHm_v2.0_Chr6g0248791 Rosa chinensis HOM05D000312 ORTHO05D000221 4.1e-06 56.6 216 24.1
Lsat_1_v5_gn_4_17080 Lactuca sativa HOM05D000312 ORTHO05D000221 5.4e-06 56.2 209 23.9
Nitab4.5_0001554g0100 Nicotiana tabacum HOM05D000312 ORTHO05D000221 5.4e-06 56.2 150 25.3
PGSC0003DMG400044760 Solanum tuberosum HOM05D000312 ORTHO05D000221 5.4e-06 56.2 144 25.0
CARHR013890 Cardamine hirsuta HOM05D000312 ORTHO05D000221 7.0e-06 55.8 183 23.5
Dinv27405 Davidia involucrata HOM05D000312 ORTHO05D000221 7.0e-06 55.8 177 24.3
Lsat_1_v5_gn_1_16301 Lactuca sativa HOM05D002069 ORTHO05D001421 7.0e-06 55.8 321 26.5
Nitab4.5_0000110g0120 Nicotiana tabacum HOM05D000312 ORTHO05D000221 7.0e-06 55.8 214 25.2
Peaxi162Scf02754g00015 Petunia axillaris HOM05D000312 ORTHO05D000221 7.0e-06 55.8 214 24.3
CAN.G265.2 Capsicum annuum HOM05D000002 ORTHO05D000001 9.1e-06 55.5 36 77.8


User provided reference genes

Program Settings