Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G508.23 Capsicum annuum HOM05D007281 ORTHO05D009241 2.1e-145 519.6 257 100.0
Solyc07g054680.3 Solanum lycopersicum HOM05D007281 ORTHO05D009241 1.2e-108 397.5 259 81.1
PGSC0003DMG400018370 Solanum tuberosum HOM05D007281 ORTHO05D009241 3.3e-106 389.4 244 84.0
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 5.1e-99 365.5 301 66.8
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 6.3e-97 358.6 259 75.7
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.1e-80 304.7 201 78.1
Sopen07g028580 Solanum pennellii HOM05D007281 ORTHO05D009241 7.4e-74 282.0 183 80.3
QL03p011182 Quercus lobata HOM05D007281 ORTHO05D009241 1.1e-45 188.3 202 48.5
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 3.3e-45 186.8 209 50.7
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 3.6e-44 183.3 259 43.2
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 1.3e-41 174.9 204 50.0
Cfa014545 Carpinus fangiana HOM05D007281 ORTHO05D009241 2.9e-41 173.7 222 45.9
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 1.4e-40 171.4 204 48.0
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 2.4e-40 170.6 204 48.0
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 2.4e-40 170.6 202 48.5
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 2.4e-40 170.6 202 48.5
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 7.0e-40 169.1 195 48.2
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 2.7e-39 167.2 180 50.0
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 4.6e-39 166.4 211 46.4
CiPaw.03G169800 Carya illinoinensis HOM05D007281 ORTHO05D009241 1.0e-38 165.2 200 47.0
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 6.6e-38 162.5 249 42.2
Haze_13088 Corylus avellana HOM05D007281 ORTHO05D009241 8.6e-38 162.2 220 44.1
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 1.9e-37 161.0 234 43.2
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 3.3e-37 160.2 204 46.1
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 5.6e-37 159.5 205 47.8
Cc05_g06270 Coffea canephora HOM05D007281 ORTHO05D009241 9.5e-37 158.7 263 39.5
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 9.5e-37 158.7 176 47.7
CANSAT64G1356 Cannabis sativa HOM05D007281 ORTHO05D009241 2.1e-36 157.5 224 42.0
Cpa.g.sc116.70 Carica papaya HOM05D007281 ORTHO05D009241 3.6e-36 156.8 203 45.8
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 6.2e-36 156.0 215 42.8
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 1.5e-34 151.4 138 55.1
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 2.9e-33 147.1 228 42.5
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 2.4e-32 144.1 204 42.6
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 1.2e-31 141.7 171 46.8
ECA234G1359 Erigeron canadensis HOM05D007281 ORTHO05D009241 2.3e-30 137.5 178 42.7
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 3.0e-30 137.1 204 41.7
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 5.1e-30 136.3 178 42.7
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 7.3e-29 132.5 200 44.0
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 1.2e-28 131.7 174 41.4
Migut.M00334 Erythranthe guttata HOM05D007281 ORTHO05D009241 2.1e-28 131.0 170 44.1
Gohir.A04G105900 Gossypium hirsutum HOM05D007281 ORTHO05D009241 3.6e-28 130.2 177 41.8
Gorai.012G131800 Gossypium raimondii HOM05D007281 ORTHO05D009241 3.6e-28 130.2 221 37.1
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 3.6e-28 130.2 165 43.6
Ca_01535_v3 Cicer arietinum L. HOM05D007281 ORTHO05D009241 6.2e-28 129.4 189 40.7
Glyma.13G301000 Glycine max HOM05D007281 ORTHO05D009241 1.8e-27 127.9 179 41.9
Gohir.D04G145700 Gossypium hirsutum HOM05D007281 ORTHO05D009241 1.8e-27 127.9 171 42.1
EL10As1g23104 Beta vulgaris HOM05D007281 ORTHO05D009241 2.3e-27 127.5 205 38.5
SalBow7G4701 Salvia bowleyana HOM05D007281 ORTHO05D009241 2.3e-27 127.5 176 40.9
Lj3g0021775 Lotus japonicus HOM05D007281 ORTHO05D009241 5.2e-27 126.3 176 42.0
MSTRG.13304 Avicennia marina HOM05D007281 ORTHO05D009241 1.5e-26 124.8 173 42.8
Ciclev10016159m.g Citrus clementina HOM05D007281 ORTHO05D009241 2.0e-26 124.4 138 50.0
AUR62041771 Chenopodium quinoa HOM05D007281 ORTHO05D009241 2.6e-26 124.0 193 40.4
PGR042G3246 Punica granatum HOM05D007281 ORTHO05D009241 2.6e-26 124.0 172 40.7
Sed0007470 Sechium edule HOM05D007281 ORTHO05D009241 4.4e-26 123.2 220 37.7
Hund01238 Selenicereus undatus HOM05D007281 ORTHO05D009241 5.8e-26 122.9 189 38.6
Hund01235 Selenicereus undatus HOM05D007281 ORTHO05D009241 9.9e-26 122.1 189 38.6
SGA_v2.0_scaffold70G23463 Striga asiatica HOM05D007281 ORTHO05D009241 9.9e-26 122.1 165 40.6
Duzib052G0115 Durio zibethinus HOM05D007281 ORTHO05D009241 1.3e-25 121.7 181 42.5
Lalb_Chr14g0366621 Lupinus albus HOM05D007281 ORTHO05D009241 3.2e-24 117.1 163 41.1
arahy.Tifrunner.gnm1.ann1.JM9TK1 Arachis hypogaea HOM05D007281 ORTHO05D009241 4.1e-24 116.7 173 38.7
Lsat_1_v5_gn_4_69540 Lactuca sativa HOM05D007281 ORTHO05D009241 4.1e-24 116.7 176 37.5
CsaV3_1G014130 Cucumis sativus L. HOM05D007281 ORTHO05D009241 9.2e-24 115.5 213 37.6
AL1G23070 Arabidopsis lyrata HOM05D007281 ORTHO05D009241 1.6e-23 114.8 181 42.5
HanXRQChr15g0488101 Helianthus annuus HOM05D007281 ORTHO05D009241 2.1e-23 114.4 166 34.9
arahy.Tifrunner.gnm1.ann1.HBB9ZN Arachis hypogaea HOM05D001233 ORTHO05D009241 3.5e-23 113.6 179 40.2
Ah.12g062420 Amaranthus hybridus HOM05D007281 ORTHO05D009241 7.8e-23 112.5 167 39.5
Carub.0001s1156 Capsella rubella HOM05D007281 ORTHO05D009241 3.0e-22 110.5 181 40.3
Phvul.005G107600 Phaseolus vulgaris HOM05D007281 ORTHO05D009241 5.1e-22 109.8 174 40.8
Thhalv10007999m.g Eutrema salsugineum HOM05D007281 ORTHO05D009241 6.6e-22 109.4 180 41.7
vmacro09292 Vaccinium macrocarpon HOM05D007281 ORTHO05D009241 6.6e-22 109.4 140 46.4
Aa31LG1G2830 Aethionema arabicum HOM05D007281 ORTHO05D009241 1.5e-21 108.2 182 39.6
VMungo1080G1478 Vigna mungo HOM05D007281 ORTHO05D009241 1.9e-21 107.8 176 39.2
Sp1g10520 Schrenkiella parvula HOM05D007281 ORTHO05D009241 2.5e-21 107.5 183 39.9
arahy.Tifrunner.gnm1.ann1.F4A8JX Arachis hypogaea HOM05D007281 ORTHO05D009241 2.1e-20 104.4 132 42.4
PSO339G5345 Papaver somniferum HOM05D007281 ORTHO05D009241 8.1e-20 102.4 178 41.6
HPP92_019763 Vanilla planifolia HOM05D007281 ORTHO05D009241 8.1e-20 102.4 180 34.4
CARHR012220 Cardamine hirsuta HOM05D007281 ORTHO05D009241 1.4e-19 101.7 182 38.5
Medtr2g090030 Medicago truncatula HOM05D007281 ORTHO05D009241 1.4e-19 101.7 179 35.2
A06p09560 Brassica napus HOM05D007281 ORTHO05D009241 2.4e-19 100.9 138 42.8
C05p11270 Brassica napus HOM05D007281 ORTHO05D009241 2.4e-19 100.9 163 41.1
BolC5t29876H Brassica oleracea HOM05D007281 ORTHO05D009241 2.4e-19 100.9 163 41.1
Medtr2g007050 Medicago truncatula HOM05D007281 ORTHO05D009241 2.4e-19 100.9 179 35.2
BraA06t24146Z Brassica rapa HOM05D007281 ORTHO05D009241 6.8e-19 99.4 163 39.9
MD17G1084400 Malus domestica HOM05D007281 ORTHO05D009241 8.9e-19 99.0 129 40.3
Psat5g268080 Pisum sativum HOM05D007281 ORTHO05D009241 1.2e-18 98.6 180 36.7
BcaC05g25243 Brassica carinata HOM05D007281 ORTHO05D009241 2.6e-18 97.4 138 42.8
Eucgr.A01777 Eucalyptus grandis HOM05D007281 ORTHO05D009241 7.6e-18 95.9 96 55.2
THA.LOC104809493 Tarenaya hassleriana HOM05D007281 ORTHO05D009241 1.3e-17 95.1 177 33.3
TPR.G27076 Trifolium pratense HOM05D007281 ORTHO05D009241 1.7e-17 94.7 179 33.5
AT1G11900 Arabidopsis thaliana HOM05D007281 ORTHO05D009241 4.9e-17 93.2 164 38.4
Prupe.3G231200 Prunus persica HOM05D007281 ORTHO05D009241 4.2e-16 90.1 130 37.7
FvH4_6g24020 Fragaria vesca HOM05D007281 ORTHO05D009241 1.0e-14 85.5 124 42.7
FAN14G1737 Fragaria x ananassa HOM05D007281 ORTHO05D009241 1.0e-14 85.5 124 42.7
ATR1127G094 Amborella trichopoda HOM05D007281 ORTHO05D009241 2.3e-14 84.3 147 38.1
FAN14G4544 Fragaria x ananassa HOM05D007281 ORTHO05D009241 5.1e-14 83.2 131 38.9
RcHm_v2.0_Chr1g0342741 Rosa chinensis HOM05D007281 ORTHO05D009241 5.1e-14 83.2 120 41.7
FvH4_6g44590 Fragaria vesca HOM05D007281 ORTHO05D009241 8.7e-14 82.4 131 38.2
FAN02G4278 Fragaria x ananassa HOM05D007281 ORTHO05D009241 1.1e-13 82.0 130 38.5
Os05g0481800 Oryza sativa ssp. japonica HOM05D007281 ORTHO05D009241 2.4e-11 74.3 116 34.5
Zm00001eb290940 Zea mays HOM05D007281 ORTHO05D009241 4.0e-11 73.6 144 32.6


User provided reference genes

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