Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 6.6e-81 303.9 146 100.0
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 5.4e-59 231.1 152 78.3
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 4.6e-58 228.0 148 78.4
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 5.1e-57 224.6 148 76.4
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 1.8e-54 216.1 155 74.8
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 6.5e-36 154.5 102 78.4
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 1.2e-29 133.7 150 46.7
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 1.0e-28 130.6 150 49.3
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 1.3e-28 130.2 147 49.0
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 2.9e-28 129.0 149 48.3
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 2.9e-28 129.0 154 45.5
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 5.0e-28 128.3 149 47.0
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 1.4e-25 120.2 152 46.1
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 6.7e-25 117.9 149 43.0
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 6.7e-25 117.9 150 46.7
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 8.8e-25 117.5 144 43.1
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 3.3e-24 115.5 147 46.3
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 4.4e-24 115.2 156 40.4
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 4.4e-24 115.2 149 42.3
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 7.4e-24 114.4 150 44.0
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 7.4e-24 114.4 153 45.1
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 9.7e-24 114.0 149 45.0
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 1.3e-23 113.6 151 41.7
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 3.7e-23 112.1 152 43.4
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 3.7e-23 112.1 152 47.4
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 6.3e-23 111.3 151 43.7
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 8.2e-23 110.9 152 44.1
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 1.1e-22 110.5 149 43.0
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 1.8e-22 109.8 149 43.0
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 2.4e-22 109.4 151 44.4
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 5.3e-22 108.2 113 51.3
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 9.1e-22 107.5 151 43.0
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 9.1e-22 107.5 148 43.9
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.2e-21 107.1 142 43.7
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 3.4e-21 105.5 154 42.2
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 4.5e-21 105.1 166 39.8
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 4.5e-21 105.1 151 43.0
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 5.9e-21 104.8 153 45.8
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 7.7e-21 104.4 161 40.4
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 1.0e-20 104.0 148 43.9
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 1.7e-20 103.2 157 42.0
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 8.5e-20 100.9 153 43.1
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 8.5e-20 100.9 148 41.2
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 1.1e-19 100.5 160 38.8
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 1.1e-19 100.5 152 39.5
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 2.5e-19 99.4 148 40.5
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 3.2e-19 99.0 153 45.1
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 9.4e-19 97.4 125 43.2
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 1.2e-18 97.1 157 42.7
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 1.6e-18 96.7 113 46.0
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 2.7e-18 95.9 162 42.0
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 6.1e-18 94.7 149 43.6
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 1.8e-17 93.2 154 41.6
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 3.0e-17 92.4 129 41.1
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 6.7e-17 91.3 159 39.6
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 2.0e-16 89.7 135 40.0
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 2.0e-16 89.7 163 39.3
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 3.3e-16 89.0 160 38.1
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 3.3e-16 89.0 156 32.7
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 4.4e-16 88.6 153 39.2
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 9.7e-16 87.4 152 37.5
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 2.2e-15 86.3 134 41.0
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 2.8e-15 85.9 143 39.9
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 2.8e-15 85.9 162 37.7
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 4.8e-15 85.1 147 39.5
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 4.8e-15 85.1 138 39.1
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 1.1e-14 84.0 149 37.6
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 1.4e-14 83.6 159 35.8
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 1.8e-14 83.2 167 38.3
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 5.3e-14 81.6 113 40.7
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 2.0e-13 79.7 148 33.8
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 2.6e-13 79.3 152 37.5
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 5.9e-13 78.2 152 36.8
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 5.9e-13 78.2 146 36.3
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 5.9e-13 78.2 162 38.9
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 7.7e-13 77.8 152 36.8
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 7.7e-13 77.8 152 36.8
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 7.7e-13 77.8 152 36.8
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 1.0e-12 77.4 153 35.3
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 1.0e-12 77.4 108 37.0
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 1.0e-12 77.4 62 61.3
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 1.3e-12 77.0 152 36.8
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 1.7e-12 76.6 156 37.8
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 1.7e-12 76.6 163 38.0
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 2.9e-12 75.9 149 36.9
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 2.9e-12 75.9 140 35.0
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 5.0e-12 75.1 157 34.4
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 5.0e-12 75.1 175 33.7
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 6.5e-12 74.7 157 34.4
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 8.5e-12 74.3 124 35.5
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 1.5e-11 73.6 132 34.1
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 1.2e-10 70.5 124 37.1
TPR.G34694 Trifolium pratense HOM05D007454 ORTHO05D009382 1.4e-09 67.0 151 33.8
Sed0011711 Sechium edule HOM05D007454 ORTHO05D009382 1.8e-09 66.6 134 32.8
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 2.3e-09 66.2 78 50.0
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 2.0e-08 63.2 96 35.4
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 3.3e-08 62.4 157 33.8
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 5.7e-08 61.6 151 30.5
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 1.3e-07 60.5 36 63.9
ATR0083G010 Amborella trichopoda HOM05D007454 ORTHO05D009382 1.8e-06 56.6 109 34.9
ATR0260G001 Amborella trichopoda HOM05D007454 ORTHO05D009382 1.8e-06 56.6 78 39.7
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 1.8e-06 56.6 43 51.2


User provided reference genes

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