Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G504.74 Capsicum annuum HOM05D007794 ORTHO05D009810 4.5e-94 347.8 166 100.0
PGSC0003DMG400005122 Solanum tuberosum HOM05D007794 ORTHO05D009810 6.8e-66 254.2 198 65.7
PGSC0003DMG400010680 Solanum tuberosum HOM05D007794 ORTHO05D009810 5.8e-65 251.1 194 65.5
CAN.G1074.4 Capsicum annuum HOM05D007794 ORTHO05D009810 2.2e-64 249.2 197 65.5
Solyc01g106140.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 3.7e-64 248.4 193 65.3
Sopen01g048510 Solanum pennellii HOM05D007794 ORTHO05D009810 7.1e-63 244.2 194 64.4
Solyc01g106130.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 2.7e-62 242.3 194 63.4
PGSC0003DMG400010679 Solanum tuberosum HOM05D007794 ORTHO05D009810 1.7e-61 239.6 193 63.7
Solyc01g106520.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 2.3e-61 239.2 197 62.9
CAN.G504.32 Capsicum annuum HOM05D007794 ORTHO05D009810 1.9e-60 236.1 198 60.6
Sopen01g048520 Solanum pennellii HOM05D007794 ORTHO05D009810 3.3e-60 235.3 198 62.6
Peaxi162Scf00016g03335 Petunia axillaris HOM05D007794 ORTHO05D009810 6.8e-58 227.6 194 59.3
Nitab4.5_0002750g0070 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.1e-55 220.3 195 60.0
CAN.G504.34 Capsicum annuum HOM05D007794 ORTHO05D009810 1.2e-54 216.9 165 66.1
Sopen01g048880 Solanum pennellii HOM05D007794 ORTHO05D009810 2.6e-49 199.1 159 62.9
Sopen01g048870 Solanum pennellii HOM05D007794 ORTHO05D009810 1.6e-43 179.9 185 50.3
Solyc01g106510.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 3.6e-43 178.7 185 49.7
Nitab4.5_0005908g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 2.2e-40 169.5 181 48.6
Nitab4.5_0001477g0100 Nicotiana tabacum HOM05D007794 ORTHO05D009810 8.4e-40 167.5 185 48.6
Peaxi162Scf00152g00085 Petunia axillaris HOM05D007794 ORTHO05D009810 7.1e-39 164.5 174 46.0
Rhsim05G0099400 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.0e-37 160.6 175 45.7
Rhsim05G0099600 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.0e-37 160.6 175 45.1
PGSC0003DMG400035168 Solanum tuberosum HOM05D007794 ORTHO05D009810 7.4e-36 154.5 163 50.3
vmacro00480 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 5.3e-34 148.3 175 42.9
vmacro19603 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 2.0e-33 146.4 175 42.9
Hma1.2p1_0908F.1_g235600 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 1.7e-32 143.3 175 42.9
Hma1.2p1_0908F.1_g235590 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 1.4e-31 140.2 175 41.1
Nitab4.5_0005609g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.9e-31 139.8 162 46.9
Rhsim05G0099000 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.9e-31 139.8 170 41.2
Actinidia28021 Actinidia chinensis HOM05D007794 ORTHO05D009810 1.6e-30 136.7 152 46.1
Rhsim05G0098900 Rhododendron simsii HOM05D007794 ORTHO05D009810 8.7e-29 131.0 164 41.5
Thecc.02G126700 Theobroma cacao HOM05D007794 ORTHO05D009810 1.5e-28 130.2 162 43.2
QL09p046398 Quercus lobata HOM05D007794 ORTHO05D009810 2.5e-28 129.4 174 41.4
Oeu059895.1 Olea europaea HOM05D007794 ORTHO05D009810 1.3e-27 127.1 183 40.4
Nn3g21331 Nelumbo nucifera HOM05D007794 ORTHO05D009810 8.2e-27 124.4 194 40.2
Manes.10G095400 Manihot esculenta HOM05D007794 ORTHO05D009810 4.5e-25 118.6 179 38.5
Sabra09G0060800 Salix brachista HOM05D007794 ORTHO05D009810 4.5e-25 118.6 162 39.5
Ciclev10030146m.g Citrus clementina HOM05D007794 ORTHO05D009810 5.8e-25 118.2 158 39.2
Manes.10G095300 Manihot esculenta HOM05D007794 ORTHO05D009810 1.0e-24 117.5 174 38.5
Potri.009G078900 Populus trichocarpa HOM05D007794 ORTHO05D009810 1.0e-24 117.5 163 40.5
Prupe.8G073600 Prunus persica HOM05D007794 ORTHO05D009810 1.7e-24 116.7 148 42.6
Manes.10G095500 Manihot esculenta HOM05D007794 ORTHO05D009810 2.9e-24 115.9 181 37.6
Migut.K01245 Erythranthe guttata HOM05D007794 ORTHO05D009810 4.2e-23 112.1 153 37.9
Nitab4.5_0000935g0170 Nicotiana tabacum HOM05D007794 ORTHO05D009810 7.1e-23 111.3 160 39.4
Peaxi162Scf00152g00088 Petunia axillaris HOM05D007794 ORTHO05D009810 9.3e-23 110.9 94 53.2
Migut.N01109 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.2e-22 110.5 158 37.3
Nitab4.5_0002750g0020 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.3e-21 107.1 160 38.1
Sopen01g048890 Solanum pennellii HOM05D007794 ORTHO05D009810 3.0e-21 105.9 149 39.6
Ciclev10030159m.g Citrus clementina HOM05D007794 ORTHO05D009810 6.7e-21 104.8 156 38.5
PGSC0003DMG400005121 Solanum tuberosum HOM05D007794 ORTHO05D009810 3.3e-20 102.4 79 54.4
TPR.G17365 Trifolium pratense HOM05D007794 ORTHO05D009810 3.3e-20 102.4 157 38.2
Migut.N01108 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.6e-19 100.1 155 36.8
VMungo0251G0278 Vigna mungo HOM05D007794 ORTHO05D009810 1.6e-19 100.1 153 35.9
Glyma.08G066300 Glycine max HOM05D007794 ORTHO05D009810 1.8e-18 96.7 145 38.6
Nn3g21338 Nelumbo nucifera HOM05D007794 ORTHO05D009810 1.7e-16 90.1 141 39.7
SGA_v2.0_scaffold207G41950 Striga asiatica HOM05D007794 ORTHO05D009810 2.2e-16 89.7 163 33.7
Oeu059893.1 Olea europaea HOM05D007794 ORTHO05D009810 8.5e-16 87.8 124 39.5
Ciclev10030054m.g Citrus clementina HOM05D007794 ORTHO05D009810 1.1e-15 87.4 140 34.3
Migut.C00209 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.1e-15 87.4 173 30.1
SGA_v2.0_scaffold207G41942 Striga asiatica HOM05D007794 ORTHO05D009810 1.9e-15 86.7 135 41.5
Migut.C00196 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.5e-15 86.3 157 31.8
Migut.C00190 Erythranthe guttata HOM05D007794 ORTHO05D009810 7.9e-14 81.3 156 32.1
Solyc01g106530.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 1.4e-13 80.5 77 46.8
Migut.C00191 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.3e-13 79.7 156 33.3
SGA_v2.0_scaffold98G29291 Striga asiatica HOM05D007794 ORTHO05D009810 3.9e-13 79.0 137 38.0
Migut.C00194 Erythranthe guttata HOM05D007794 ORTHO05D009810 8.8e-13 77.8 172 28.5
SGA_v2.0_scaffold207G41947 Striga asiatica HOM05D007794 ORTHO05D009810 2.0e-12 76.6 152 35.5
Migut.C00193 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.7e-11 72.4 156 30.8
SGA_v2.0_scaffold98G29290 Striga asiatica HOM05D007794 ORTHO05D009810 4.8e-11 72.0 153 35.3
TPR.G32148 Trifolium pratense HOM05D001479 ORTHO05D009810 1.4e-10 70.5 111 39.6
SGA_v2.0_scaffold207G41944 Striga asiatica HOM05D007794 ORTHO05D009810 4.1e-10 68.9 143 35.0
Migut.C00208 Erythranthe guttata HOM05D007794 ORTHO05D009810 5.9e-09 65.1 133 29.3
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.0e-08 64.3 174 26.4
Migut.O00773 Erythranthe guttata HOM05D007794 ORTHO05D009810 6.5e-08 61.6 104 31.7
Rhsim02G0140200 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.1e-07 60.8 51 58.8
AUR62024918 Chenopodium quinoa HOM05D000587 ORTHO05D001561 7.2e-07 58.2 50 48.0
Dinv38964 Davidia involucrata HOM05D000151 ORTHO05D000074 7.2e-07 58.2 97 34.0
Migut.C00192 Erythranthe guttata HOM05D007794 ORTHO05D009810 7.2e-07 58.2 140 27.1
Hma1.2p1_0032F.1_g018990 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 7.2e-07 58.2 124 29.8
Aqoxy2G01392 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.4e-07 57.8 125 32.8
MSTRG.6367 Avicennia marina HOM05D000151 ORTHO05D000074 1.2e-06 57.4 107 31.8
Cfa004824 Carpinus fangiana HOM05D007794 ORTHO05D009810 1.2e-06 57.4 118 35.6
AUR62024928 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.2e-06 57.4 100 32.0
Dinv38984 Davidia involucrata HOM05D000151 ORTHO05D000074 1.2e-06 57.4 100 30.0
RcHm_v2.0_Chr6g0277851 Rosa chinensis HOM05D000151 ORTHO05D000074 1.2e-06 57.4 110 30.0
DCAR_022831 Daucus carota HOM05D000151 ORTHO05D000074 1.6e-06 57.0 93 36.6
Dinv12037 Davidia involucrata HOM05D000151 ORTHO05D000074 1.6e-06 57.0 84 34.5
Actinidia01831 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.1e-06 56.6 86 33.7
Ciclev10024484m.g Citrus clementina HOM05D000151 ORTHO05D000074 2.1e-06 56.6 114 32.5
COL.COLO4_12986 Corchorus olitorius HOM05D000151 ORTHO05D000074 2.1e-06 56.6 147 32.0
Aqoxy3G01208 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.7e-06 56.2 108 30.6
Aqoxy6G00560 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.6e-06 55.8 53 43.4
Dinv37496 Davidia involucrata HOM05D000151 ORTHO05D000074 3.6e-06 55.8 100 33.0
FvH4_4g02770 Fragaria vesca HOM05D000151 ORTHO05D000074 3.6e-06 55.8 77 37.7
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.6e-06 55.8 91 35.2
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 4.7e-06 55.5 91 35.2
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 4.7e-06 55.5 91 35.2
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.7e-06 55.5 91 31.9
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 6.1e-06 55.1 91 35.2
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 7.9e-06 54.7 56 41.1
Dinv12036 Davidia involucrata HOM05D000151 ORTHO05D000074 7.9e-06 54.7 56 41.1
Lj5P174T68 Lonicera japonica HOM05D000151 ORTHO05D000074 7.9e-06 54.7 130 29.2
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.9e-06 54.7 88 31.8


User provided reference genes

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