Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 1.4e-54 216.1 115 100.0
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 5.1e-44 181.0 122 82.0
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 1.9e-43 179.1 122 81.1
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 5.6e-43 177.6 122 79.5
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.0e-36 156.8 114 73.7
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.8e-36 156.0 114 72.8
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 8.4e-31 137.1 116 70.7
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 3.2e-30 135.2 112 74.1
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 1.3e-28 129.8 119 63.0
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 3.0e-28 128.6 114 64.0
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 5.7e-27 124.4 117 65.0
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 7.4e-27 124.0 116 62.9
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 1.1e-25 120.2 115 61.7
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 5.3e-25 117.9 119 55.5
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 2.0e-24 115.9 117 59.0
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 2.0e-24 115.9 117 60.7
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 2.6e-24 115.5 114 56.1
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 2.6e-24 115.5 116 59.5
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 2.6e-24 115.5 115 58.3
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 5.9e-24 114.4 116 56.9
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 5.9e-24 114.4 113 58.4
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 7.6e-24 114.0 113 57.5
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 7.6e-24 114.0 116 57.8
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 1.0e-23 113.6 116 58.6
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 1.3e-23 113.2 99 63.6
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.3e-23 113.2 119 52.9
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 1.3e-23 113.2 113 57.5
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.7e-23 112.8 119 52.9
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 1.7e-23 112.8 119 54.6
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 2.2e-23 112.5 119 55.5
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.9e-23 112.1 120 55.0
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.9e-23 112.1 119 52.9
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 2.9e-23 112.1 115 53.9
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 3.8e-23 111.7 116 54.3
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 3.8e-23 111.7 119 52.9
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 3.8e-23 111.7 116 55.2
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 3.8e-23 111.7 117 54.7
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 5.0e-23 111.3 118 58.5
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 5.0e-23 111.3 116 56.9
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 5.0e-23 111.3 117 59.0
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 6.5e-23 110.9 115 56.5
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 8.4e-23 110.5 119 58.0
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 1.4e-22 109.8 94 64.9
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 1.4e-22 109.8 114 58.8
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 1.9e-22 109.4 115 54.8
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 1.9e-22 109.4 109 56.9
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 1.9e-22 109.4 115 53.0
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 3.2e-22 108.6 117 53.0
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 7.2e-22 107.5 117 52.1
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 1.2e-21 106.7 117 53.8
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.1e-21 105.9 121 55.4
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 3.5e-21 105.1 116 56.0
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 4.6e-21 104.8 116 52.6
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 6.1e-21 104.4 139 51.1
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 1.0e-20 103.6 118 49.2
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 1.8e-20 102.8 116 53.4
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 2.3e-20 102.4 117 53.0
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 2.3e-20 102.4 72 63.9
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 5.1e-20 101.3 118 51.7
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 5.1e-20 101.3 119 50.4
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 5.1e-20 101.3 103 60.2
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 6.7e-20 100.9 117 50.4
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 6.7e-20 100.9 116 54.3
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 6.7e-20 100.9 118 50.0
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 6.7e-20 100.9 116 53.4
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 6.7e-20 100.9 116 51.7
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 6.7e-20 100.9 118 50.8
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 1.5e-19 99.8 116 52.6
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 1.5e-19 99.8 116 52.6
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 1.5e-19 99.8 117 52.1
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 1.9e-19 99.4 113 52.2
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 1.9e-19 99.4 120 50.0
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 2.5e-19 99.0 116 54.3
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 3.3e-19 98.6 110 55.5
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 4.3e-19 98.2 115 48.7
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 5.7e-19 97.8 116 49.1
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 7.4e-19 97.4 118 48.3
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 9.7e-19 97.1 114 52.6
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 9.7e-19 97.1 57 73.7
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.2e-18 95.9 120 50.8
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 2.2e-18 95.9 115 48.7
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 2.2e-18 95.9 117 49.6
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 3.7e-18 95.1 114 51.8
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 6.3e-18 94.4 117 51.3
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 6.3e-18 94.4 99 49.5
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 1.1e-17 93.6 107 57.0
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 1.1e-17 93.6 68 61.8
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 1.4e-17 93.2 118 50.0
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 1.4e-17 93.2 117 51.3
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 5.3e-17 91.3 107 53.3
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 5.3e-17 91.3 110 48.2
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 6.9e-17 90.9 102 53.9
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 6.9e-17 90.9 60 70.0
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 1.5e-16 89.7 114 51.8
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 4.5e-16 88.2 108 54.6
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 1.0e-15 87.0 51 76.5
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.2e-15 85.9 63 65.1
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 6.5e-15 84.3 104 54.8
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 1.9e-14 82.8 112 50.0
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 3.2e-14 82.0 106 48.1
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 4.2e-14 81.6 103 49.5
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 4.2e-14 81.6 97 53.6
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 4.6e-13 78.2 118 46.6
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.9e-12 75.1 103 46.6
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 1.1e-11 73.6 117 41.9
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 1.1e-11 73.6 113 39.8
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 2.5e-11 72.4 113 42.5
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 1.3e-10 70.1 117 41.0
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 2.8e-10 68.9 107 43.0
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 1.5e-08 63.2 114 44.7
Peaxi162Scf01313g00026 Petunia axillaris HOM05D007113 ORTHO05D008859 7.7e-08 60.8 31 90.3
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 1.3e-07 60.1 84 45.2
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 6.5e-07 57.8 39 66.7
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 1.9e-06 56.2 67 49.3
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 2.5e-06 55.8 105 41.9


User provided reference genes

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