Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G501.7 Capsicum annuum HOM05D000484 ORTHO05D000346 8.9e-105 383.6 198 100.0
CAN.G501.8 Capsicum annuum HOM05D000484 ORTHO05D000346 4.2e-14 82.4 54 74.1
SalBow3G0649 Salvia bowleyana HOM05D000484 ORTHO05D000346 2.7e-13 79.7 76 53.9
MSTRG.5778 Avicennia marina HOM05D000484 ORTHO05D000346 1.4e-12 77.4 52 71.2
Nitab4.5_0000527g0090 Nicotiana tabacum HOM05D000484 ORTHO05D000346 1.4e-12 77.4 54 72.2
Solyc10g086320.2 Solanum lycopersicum HOM05D000484 ORTHO05D000346 1.8e-12 77.0 55 72.7
Sopen10g035700 Solanum pennellii HOM05D000484 ORTHO05D000346 1.8e-12 77.0 55 72.7
Nitab4.5_0000349g0060 Nicotiana tabacum HOM05D000484 ORTHO05D000346 2.3e-12 76.6 54 70.4
Peaxi162Scf00407g00625 Petunia axillaris HOM05D000484 ORTHO05D000346 2.3e-12 76.6 54 72.2
SGA_v2.0_scaffold224G42930 Striga asiatica HOM05D000484 ORTHO05D000346 3.0e-12 76.3 52 69.2
Lj3C990G18 Lonicera japonica HOM05D000484 ORTHO05D000346 4.0e-12 75.9 71 56.3
Phvul.001G181400 Phaseolus vulgaris HOM05D000484 ORTHO05D000346 4.0e-12 75.9 75 60.0
Cc06_g04570 Coffea canephora HOM05D000484 ORTHO05D000346 6.8e-12 75.1 52 69.2
Migut.J00457 Erythranthe guttata HOM05D000484 ORTHO05D000346 8.8e-12 74.7 52 67.3
MSTRG.26676 Avicennia marina HOM05D000484 ORTHO05D000346 1.2e-11 74.3 53 66.0
Oeu056531.1 Olea europaea HOM05D000484 ORTHO05D000346 1.2e-11 74.3 52 67.3
VMungo1383G3162 Vigna mungo HOM05D000484 ORTHO05D000346 2.6e-11 73.2 56 73.2
Oeu041476.1 Olea europaea HOM05D000484 ORTHO05D000346 3.4e-11 72.8 52 67.3
Dinv37342 Davidia involucrata HOM05D000484 ORTHO05D000346 5.7e-11 72.0 54 68.5
arahy.Tifrunner.gnm1.ann1.063DHX Arachis hypogaea HOM05D000484 ORTHO05D000346 7.5e-11 71.6 77 53.2
CSS0033192 Camellia sinensis var. sinensis HOM05D000484 ORTHO05D000346 7.5e-11 71.6 77 50.6
CSS0038983 Camellia sinensis var. sinensis HOM05D000484 ORTHO05D000346 7.5e-11 71.6 77 50.6
Nitab4.5_0002373g0070 Nicotiana tabacum HOM05D000484 ORTHO05D000346 7.5e-11 71.6 54 70.4
CAN.G1038.15 Capsicum annuum HOM05D000484 ORTHO05D000346 9.8e-11 71.2 54 70.4
Phvul.007G152000 Phaseolus vulgaris HOM05D000484 ORTHO05D000346 9.8e-11 71.2 76 55.3
SGA_v2.0_scaffold40G15469 Striga asiatica HOM05D000484 ORTHO05D000346 9.8e-11 71.2 54 63.0
Glyma.03G186300 Glycine max HOM05D000484 ORTHO05D000346 1.7e-10 70.5 75 54.7
Solyc09g008480.4 Solanum lycopersicum HOM05D000484 ORTHO05D000346 1.7e-10 70.5 53 71.7
Sopen09g003310 Solanum pennellii HOM05D000484 ORTHO05D000346 1.7e-10 70.5 53 71.7
Solyc04g017620.4 Solanum lycopersicum HOM05D000484 ORTHO05D000346 2.2e-10 70.1 53 71.7
arahy.Tifrunner.gnm1.ann1.F8G62F Arachis hypogaea HOM05D000484 ORTHO05D000346 2.8e-10 69.7 76 52.6
arahy.Tifrunner.gnm1.ann1.YDD7G1 Arachis hypogaea HOM05D000484 ORTHO05D000346 2.8e-10 69.7 76 52.6
VMungo0720G1209 Vigna mungo HOM05D000484 ORTHO05D000346 2.8e-10 69.7 76 53.9
Hma1.2p1_0547F.1_g176510 Hydrangea macrophylla HOM05D000484 ORTHO05D000346 3.7e-10 69.3 55 69.1
Lj5g0002009 Lotus japonicus HOM05D000484 ORTHO05D000346 3.7e-10 69.3 77 51.9
Peaxi162Scf00435g01211 Petunia axillaris HOM05D000484 ORTHO05D000346 3.7e-10 69.3 54 66.7
Eucgr.A01618 Eucalyptus grandis HOM05D000484 ORTHO05D000346 4.9e-10 68.9 73 49.3
Medtr1g062740 Medicago truncatula HOM05D000484 ORTHO05D000346 4.9e-10 68.9 76 53.9
PGSC0003DMG401003899 Solanum tuberosum HOM05D000484 ORTHO05D000346 4.9e-10 68.9 53 69.8
TPR.G21002 Trifolium pratense HOM05D000484 ORTHO05D000346 4.9e-10 68.9 76 53.9
Dinv35816 Davidia involucrata HOM05D000484 ORTHO05D000346 6.3e-10 68.6 53 67.9
HanXRQChr07g0186211 Helianthus annuus HOM05D000484 ORTHO05D000346 6.3e-10 68.6 54 64.8
Psat6g075800 Pisum sativum HOM05D000484 ORTHO05D000346 6.3e-10 68.6 77 51.9
arahy.Tifrunner.gnm1.ann1.R4D1TU Arachis hypogaea HOM05D000484 ORTHO05D000346 8.3e-10 68.2 84 47.6
PGR004G2655 Punica granatum HOM05D000484 ORTHO05D000346 8.3e-10 68.2 71 50.7
Cfa021475 Carpinus fangiana HOM05D000484 ORTHO05D000346 1.1e-09 67.8 75 54.7
Haze_19438 Corylus avellana HOM05D000484 ORTHO05D000346 1.1e-09 67.8 75 54.7
Migut.L01722 Erythranthe guttata HOM05D000484 ORTHO05D000346 1.1e-09 67.8 54 63.0
CSS0030292 Camellia sinensis var. sinensis HOM05D000484 ORTHO05D000346 1.4e-09 67.4 54 63.0
Ca_06429_v3 Cicer arietinum L. HOM05D000484 ORTHO05D000346 1.4e-09 67.4 76 51.3
Lsat_1_v5_gn_6_28461 Lactuca sativa HOM05D000484 ORTHO05D000346 1.4e-09 67.4 54 64.8
Lalb_Chr21g0315111 Lupinus albus HOM05D000484 ORTHO05D000346 1.4e-09 67.4 76 53.9
Lalb_Chr25g0288871 Lupinus albus HOM05D000484 ORTHO05D000346 1.4e-09 67.4 76 53.9
Rhsim03G0089000 Rhododendron simsii HOM05D000484 ORTHO05D000346 1.4e-09 67.4 54 64.8
Glyma.10G060000 Glycine max HOM05D000484 ORTHO05D000346 1.8e-09 67.0 76 52.6
HanXRQChr13g0400701 Helianthus annuus HOM05D000484 ORTHO05D000346 1.8e-09 67.0 52 65.4
Lj2A117T95 Lonicera japonica HOM05D000484 ORTHO05D000346 1.8e-09 67.0 52 61.5
Thecc.05G071700 Theobroma cacao HOM05D000484 ORTHO05D000346 1.8e-09 67.0 73 53.4
Thecc.05G072000 Theobroma cacao HOM05D000484 ORTHO05D000346 1.8e-09 67.0 73 53.4
DCAR_015010 Daucus carota HOM05D000484 ORTHO05D000346 2.4e-09 66.6 56 62.5
Duzib093G0318 Durio zibethinus HOM05D000484 ORTHO05D000346 2.4e-09 66.6 73 53.4
Gohir.A01G212200 Gossypium hirsutum HOM05D000484 ORTHO05D000346 2.4e-09 66.6 73 52.1
Lalb_Chr01g0018581 Lupinus albus HOM05D000484 ORTHO05D000346 2.4e-09 66.6 76 56.6
Lj1g0011172 Lotus japonicus HOM05D000484 ORTHO05D000346 3.1e-09 66.2 78 53.8
Cpa.g.sc5.160 Carica papaya HOM05D000484 ORTHO05D000346 4.1e-09 65.9 74 55.4
MELO3C009382.2 Cucumis melo HOM05D000484 ORTHO05D000346 4.1e-09 65.9 76 51.3
CsaV3_3G036240 Cucumis sativus L. HOM05D000484 ORTHO05D000346 5.4e-09 65.5 76 50.0
QL07p042195 Quercus lobata HOM05D000484 ORTHO05D000346 5.4e-09 65.5 57 63.2
QL07p042226 Quercus lobata HOM05D000484 ORTHO05D000346 5.4e-09 65.5 57 63.2
CANSAT80G1000 Cannabis sativa HOM05D000484 ORTHO05D000346 7.0e-09 65.1 75 50.7
Duzib106G0652 Durio zibethinus HOM05D000484 ORTHO05D000346 7.0e-09 65.1 73 52.1
Gorai.002G245600 Gossypium raimondii HOM05D000484 ORTHO05D000346 9.2e-09 64.7 73 50.7
Sed0025646 Sechium edule HOM05D000484 ORTHO05D000346 1.2e-08 64.3 77 50.6
TWI74G0361 Tripterygium wilfordii HOM05D000484 ORTHO05D000346 1.6e-08 63.9 67 53.7
TWI77G0783 Tripterygium wilfordii HOM05D000484 ORTHO05D000346 1.6e-08 63.9 47 70.2
TAR623G0397 Trochodendron aralioides HOM05D000484 ORTHO05D000346 1.6e-08 63.9 54 64.8
CiPaw.09G002800 Carya illinoinensis HOM05D000484 ORTHO05D000346 2.0e-08 63.5 76 50.0
Sabra06G0095400 Salix brachista HOM05D000484 ORTHO05D000346 2.0e-08 63.5 71 50.7
HPP92_020823 Vanilla planifolia HOM05D000484 ORTHO05D000346 2.0e-08 63.5 73 53.4
Glyma.13G146700 Glycine max HOM05D000484 ORTHO05D000346 2.7e-08 63.2 76 50.0
Potri.006G121200 Populus trichocarpa HOM05D000484 ORTHO05D000346 2.7e-08 63.2 52 63.5
RcHm_v2.0_Chr3g0470911 Rosa chinensis HOM05D000484 ORTHO05D000346 2.7e-08 63.2 84 47.6
Actinidia28921 Actinidia chinensis HOM05D000484 ORTHO05D000346 3.5e-08 62.8 53 64.2
ClCG10G019860 Citrullus lanatus HOM05D000484 ORTHO05D000346 3.5e-08 62.8 67 52.2
Prupe.7G125200 Prunus persica HOM05D000484 ORTHO05D000346 3.5e-08 62.8 56 64.3
Ciclev10011083m.g Citrus clementina HOM05D000484 ORTHO05D000346 4.5e-08 62.4 72 51.4
Sc20g0005700 Simmondsia chinensis HOM05D000484 ORTHO05D000346 4.5e-08 62.4 47 63.8
GSVIVG01033689001 Vitis vinifera HOM05D000484 ORTHO05D000346 4.5e-08 62.4 51 62.7
Gohir.D01G200900 Gossypium hirsutum HOM05D000484 ORTHO05D000346 5.9e-08 62.0 73 49.3
ECA233G3470 Erigeron canadensis HOM05D000484 ORTHO05D000346 7.7e-08 61.6 52 59.6
FvH4_6g16890 Fragaria vesca HOM05D000484 ORTHO05D000346 1.0e-07 61.2 84 47.6
FAN02G2726 Fragaria x ananassa HOM05D000484 ORTHO05D000346 1.0e-07 61.2 84 47.6
FAN05G5258 Fragaria x ananassa HOM05D000484 ORTHO05D000346 1.0e-07 61.2 84 47.6
MD12G1106400 Malus domestica HOM05D000484 ORTHO05D000346 1.0e-07 61.2 75 52.0
CSS0011134 Camellia sinensis var. sinensis HOM05D000484 ORTHO05D000346 1.3e-07 60.8 56 60.7
CSS0050154 Camellia sinensis var. sinensis HOM05D000484 ORTHO05D000346 1.3e-07 60.8 56 60.7
ECA233G0088 Erigeron canadensis HOM05D000484 ORTHO05D000346 1.3e-07 60.8 53 56.6
COL.COLO4_26908 Corchorus olitorius HOM05D000484 ORTHO05D000346 1.7e-07 60.5 73 52.1
FAN05G1985 Fragaria x ananassa HOM05D000484 ORTHO05D000346 1.7e-07 60.5 56 62.5
FAN09G1819 Fragaria x ananassa HOM05D000484 ORTHO05D000346 1.7e-07 60.5 75 49.3
MD04G1088700 Malus domestica HOM05D000484 ORTHO05D000346 1.7e-07 60.5 75 50.7
Atru.chr8.1746 Acer truncatum HOM05D000484 ORTHO05D000346 2.9e-07 59.7 74 50.0
EL10Ac7g16689 Beta vulgaris HOM05D000484 ORTHO05D000346 3.8e-07 59.3 48 62.5
PSO339G5360 Papaver somniferum HOM05D000484 ORTHO05D000346 3.8e-07 59.3 54 57.4
PSO801G0700 Papaver somniferum HOM05D000484 ORTHO05D000346 3.8e-07 59.3 54 57.4
Sed0005248 Sechium edule HOM05D000484 ORTHO05D000346 3.8e-07 59.3 76 47.4
AUR62043426 Chenopodium quinoa HOM05D000484 ORTHO05D000346 6.6e-07 58.5 48 62.5
AUR62044426 Chenopodium quinoa HOM05D000484 ORTHO05D000346 6.6e-07 58.5 48 62.5
Gohir.A04G070100 Gossypium hirsutum HOM05D000484 ORTHO05D000346 6.6e-07 58.5 48 66.7
Gohir.D04G108600 Gossypium hirsutum HOM05D000484 ORTHO05D000346 6.6e-07 58.5 48 66.7
Gorai.009G412700 Gossypium raimondii HOM05D000484 ORTHO05D000346 6.6e-07 58.5 48 66.7
Nitab4.5_0003314g0060 Nicotiana tabacum HOM05D000484 ORTHO05D000346 6.6e-07 58.5 46 67.4
Nn6g35214 Nelumbo nucifera HOM05D000484 ORTHO05D000346 1.1e-06 57.8 79 46.8
Sopen04g008690 Solanum pennellii HOM05D000484 ORTHO05D000346 1.5e-06 57.4 45 68.9
Nn2g13864 Nelumbo nucifera HOM05D000484 ORTHO05D000346 2.5e-06 56.6 48 58.3
Aqoxy2G01649 Aquilegia oxysepala HOM05D000484 ORTHO05D000346 3.3e-06 56.2 51 60.8
AUR62026951 Chenopodium quinoa HOM05D000484 ORTHO05D000346 5.6e-06 55.5 48 60.4
ATR0105G004 Amborella trichopoda HOM05D000484 ORTHO05D000346 7.3e-06 55.1 54 57.4


User provided reference genes

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