Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 1.1e-60 236.5 119 100.0
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 1.9e-57 225.7 119 95.0
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 1.2e-51 206.5 119 89.9
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 2.0e-51 205.7 119 88.2
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 4.4e-51 204.5 119 87.4
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 3.0e-39 165.2 116 74.1
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 8.7e-39 163.7 112 73.2
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 4.3e-38 161.4 112 71.4
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 4.3e-38 161.4 112 72.3
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 4.3e-38 161.4 100 81.0
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 1.6e-37 159.5 107 74.8
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 1.6e-37 159.5 100 75.0
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 3.7e-37 158.3 116 70.7
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 8.1e-37 157.1 96 78.1
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 2.4e-36 155.6 102 74.5
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 3.1e-36 155.2 96 76.0
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 4.0e-36 154.8 108 69.4
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 5.3e-36 154.5 117 62.4
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 5.3e-36 154.5 109 70.6
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 6.9e-36 154.1 103 74.8
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 9.0e-36 153.7 102 76.5
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 1.2e-35 153.3 103 71.8
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 1.5e-35 152.9 107 70.1
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 1.5e-35 152.9 102 70.6
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 2.6e-35 152.1 101 72.3
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 3.4e-35 151.8 92 76.1
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 3.4e-35 151.8 115 63.5
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 3.4e-35 151.8 100 75.0
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 3.4e-35 151.8 104 72.1
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 4.5e-35 151.4 101 69.3
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 4.5e-35 151.4 101 69.3
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 4.5e-35 151.4 90 80.0
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 7.6e-35 150.6 97 72.2
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 7.6e-35 150.6 94 77.7
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.0e-34 150.2 107 70.1
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 1.0e-34 150.2 114 64.9
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.0e-34 150.2 99 71.7
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 1.0e-34 150.2 95 73.7
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.3e-34 149.8 101 68.3
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 1.3e-34 149.8 110 68.2
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 1.7e-34 149.4 108 66.7
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 1.7e-34 149.4 100 70.0
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 1.7e-34 149.4 93 77.4
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 2.2e-34 149.1 95 74.7
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 2.2e-34 149.1 103 71.8
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 2.9e-34 148.7 101 70.3
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 3.8e-34 148.3 90 77.8
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 3.8e-34 148.3 92 76.1
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 4.9e-34 147.9 90 78.9
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 6.5e-34 147.5 102 67.6
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 8.4e-34 147.1 103 68.0
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 1.1e-33 146.7 100 68.0
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.4e-33 146.4 90 77.8
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 1.4e-33 146.4 95 69.5
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 2.5e-33 145.6 103 68.9
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 2.5e-33 145.6 105 68.6
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 2.5e-33 145.6 97 74.2
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 2.5e-33 145.6 97 69.1
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 3.2e-33 145.2 86 80.2
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 7.1e-33 144.1 101 67.3
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 9.3e-33 143.7 101 67.3
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 9.3e-33 143.7 89 76.4
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 1.2e-32 143.3 96 71.9
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 1.2e-32 143.3 96 71.9
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 1.2e-32 143.3 96 71.9
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 1.6e-32 142.9 89 76.4
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 1.6e-32 142.9 89 76.4
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 2.1e-32 142.5 94 71.3
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 2.1e-32 142.5 90 76.7
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 2.7e-32 142.1 96 70.8
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 2.7e-32 142.1 89 75.3
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 2.7e-32 142.1 89 75.3
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 2.7e-32 142.1 96 70.8
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 2.7e-32 142.1 89 76.4
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 2.7e-32 142.1 116 57.8
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 3.5e-32 141.7 96 70.8
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 3.5e-32 141.7 96 70.8
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 3.5e-32 141.7 96 70.8
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 4.6e-32 141.4 96 70.8
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 4.6e-32 141.4 94 71.3
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 7.9e-32 140.6 107 69.2
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 1.8e-31 139.4 101 66.3
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 1.8e-31 139.4 94 70.2
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 2.3e-31 139.0 96 68.8
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.9e-30 136.0 90 72.2
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 2.5e-30 135.6 79 79.7
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 4.3e-30 134.8 80 77.5
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 4.3e-30 134.8 76 82.9
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 2.8e-29 132.1 80 76.2
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 3.1e-28 128.6 92 64.1
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 3.4e-27 125.2 76 78.9
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 7.6e-27 124.0 117 63.2
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 7.6e-27 124.0 98 60.2
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.0e-26 123.6 77 76.6
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 1.7e-26 122.9 79 70.9
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 5.0e-26 121.3 93 61.3
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 6.5e-26 120.9 84 67.9
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 1.1e-25 120.2 108 57.4
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 7.2e-25 117.5 71 78.9
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 1.2e-24 116.7 86 69.8
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 3.1e-20 102.1 97 51.5
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 6.9e-20 100.9 104 46.2
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 1.1e-17 93.6 106 43.4
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 7.2e-17 90.9 95 46.3
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 4.3e-14 81.6 76 51.3
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 7.4e-14 80.9 110 37.3
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 1.1e-09 67.0 89 42.7


User provided reference genes

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