Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 3.5e-172 608.6 403 100.0
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 2.8e-137 492.7 379 79.4
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 4.7e-137 491.9 379 85.5
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 7.5e-135 484.6 379 76.8
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 5.8e-127 458.4 387 77.5
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 4.3e-114 415.6 413 73.4
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 3.0e-99 366.3 265 73.2
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.1e-82 311.2 387 56.1
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 1.7e-81 307.4 395 55.2
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 4.2e-77 292.7 361 54.0
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 7.9e-76 288.5 383 50.4
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 9.1e-72 275.0 276 58.3
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.5e-71 274.2 380 55.8
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 1.3e-70 271.2 280 57.1
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 2.9e-70 270.0 383 50.1
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.5e-69 266.9 281 56.6
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 5.5e-69 265.8 381 52.2
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 9.4e-69 265.0 281 56.2
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 1.2e-68 264.6 274 54.7
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.6e-68 264.2 382 51.6
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 6.7e-67 258.8 392 54.3
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 1.5e-66 257.7 393 53.9
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 2.0e-66 257.3 279 52.0
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 2.6e-66 256.9 392 53.8
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 3.3e-66 256.5 280 56.1
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 3.3e-66 256.5 384 50.3
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 4.4e-66 256.1 269 54.6
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 7.4e-66 255.4 400 51.0
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 9.7e-66 255.0 393 53.9
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 1.3e-65 254.6 277 52.7
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 3.7e-65 253.1 383 56.7
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 1.8e-64 250.8 275 53.5
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.8e-64 250.8 386 57.3
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 4.1e-64 249.6 364 54.4
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 5.3e-64 249.2 390 50.5
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 5.3e-64 249.2 396 51.0
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 1.2e-63 248.1 383 51.7
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.2e-63 248.1 384 50.5
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 1.2e-63 248.1 391 52.7
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 1.6e-63 247.7 383 50.1
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 1.6e-63 247.7 269 56.9
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 2.0e-63 247.3 356 52.0
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 2.0e-63 247.3 202 62.9
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 2.6e-63 246.9 280 52.5
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 4.5e-63 246.1 288 52.1
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 7.7e-63 245.4 271 53.9
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 1.7e-62 244.2 347 44.7
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 2.2e-62 243.8 382 50.5
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 1.1e-61 241.5 200 61.5
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.9e-61 240.7 347 56.5
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 2.5e-61 240.4 277 56.0
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 2.5e-61 240.4 276 55.1
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 7.2e-61 238.8 280 51.4
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 4.7e-60 236.1 277 50.9
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 6.1e-60 235.7 380 53.2
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 1.0e-59 235.0 377 52.8
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 1.4e-59 234.6 377 53.1
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.4e-59 234.6 277 53.4
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 4.0e-59 233.0 273 50.9
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 6.7e-59 232.3 182 64.3
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 1.2e-58 231.5 352 49.7
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 1.5e-58 231.1 391 51.7
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 5.7e-58 229.2 276 51.8
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 7.5e-58 228.8 387 48.6
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 1.3e-57 228.0 271 52.0
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 2.8e-57 226.9 385 53.5
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 2.8e-57 226.9 385 53.8
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 4.8e-57 226.1 480 44.8
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 6.3e-57 225.7 406 47.8
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 1.1e-56 224.9 281 47.7
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 1.8e-56 224.2 297 44.8
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 3.1e-56 223.4 272 51.5
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 7.0e-56 222.2 192 60.4
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 7.7e-55 218.8 275 54.5
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.0e-54 218.4 373 48.3
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 1.7e-54 217.6 391 48.3
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 2.9e-54 216.9 200 57.0
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 5.0e-54 216.1 395 46.3
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 6.5e-54 215.7 273 49.5
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 1.9e-53 214.2 198 57.1
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 3.2e-53 213.4 273 54.2
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 3.2e-53 213.4 272 55.5
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 1.2e-52 211.5 270 47.0
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 2.1e-52 210.7 275 53.5
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 4.7e-52 209.5 195 59.5
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 8.0e-52 208.8 285 50.2
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.3e-51 207.2 206 53.9
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 2.3e-51 207.2 192 56.2
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 4.0e-51 206.5 197 57.4
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 6.8e-51 205.7 293 47.8
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 8.8e-51 205.3 235 52.3
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 4.8e-49 199.5 435 42.5
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 4.8e-49 199.5 188 57.4
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 8.3e-49 198.7 208 52.4
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 3.1e-48 196.8 177 60.5
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 1.6e-47 194.5 197 54.8
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 7.7e-47 192.2 197 54.3
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 3.8e-46 189.9 201 52.2
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.9e-45 187.6 265 41.9
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 5.5e-45 186.0 370 47.8
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 3.6e-44 183.3 202 51.5
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.0e-43 181.8 196 54.1
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 1.4e-43 181.4 166 59.0
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 2.2e-41 174.1 174 56.9
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 1.7e-38 164.5 209 45.9
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 2.5e-37 160.6 275 42.9
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 2.8e-36 157.1 209 41.6
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 6.8e-35 152.5 214 40.7
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 1.4e-32 144.8 215 40.9
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 6.6e-30 136.0 262 54.6
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 7.5e-26 122.5 199 41.2
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 3.3e-21 107.1 128 51.6
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 3.5e-15 87.0 60 73.3
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 4.7e-12 76.6 154 36.4
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 2.2e-09 67.8 177 46.3
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.1e-08 65.5 49 67.3
PRCOL_00004793 Prasinoderma coloniale HOM05D002428 ORTHO05D008664 6.6e-06 56.2 160 26.2


User provided reference genes

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