Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G5.1 Capsicum annuum HOM05D004746 ORTHO05D005863 5.1e-66 254.2 125 100.0
Nitab4.5_0009417g0010 Nicotiana tabacum HOM05D004746 ORTHO05D005863 1.8e-39 166.0 92 87.0
PGSC0003DMG400006259 Solanum tuberosum HOM05D004746 ORTHO05D005863 9.1e-39 163.7 92 88.0
Peaxi162Scf01132g00141 Petunia axillaris HOM05D004746 ORTHO05D005863 1.2e-38 163.3 92 85.9
Sopen09g001110 Solanum pennellii HOM05D004746 ORTHO05D005863 2.7e-38 162.2 92 87.0
Nitab4.5_0000195g0230 Nicotiana tabacum HOM05D004746 ORTHO05D005863 8.6e-37 157.1 87 89.7
GSVIVG01003936001 Vitis vinifera HOM05D004746 ORTHO05D005863 4.0e-34 148.3 92 75.0
Lj3C949T2 Lonicera japonica HOM05D004746 ORTHO05D005863 1.5e-33 146.4 92 72.8
Oeu033576.1 Olea europaea HOM05D004746 ORTHO05D005863 1.5e-33 146.4 92 75.0
TWI77G0319 Tripterygium wilfordii HOM05D004746 ORTHO05D005863 1.5e-33 146.4 99 68.7
FvH4_4g00010 Fragaria vesca HOM05D004746 ORTHO05D005863 2.0e-33 146.0 92 76.1
Dinv16904 Davidia involucrata HOM05D004746 ORTHO05D005863 2.6e-33 145.6 91 79.1
vmacro20299 Vaccinium macrocarpon HOM05D004746 ORTHO05D005863 3.4e-33 145.2 92 72.8
Dinv13139 Davidia involucrata HOM05D004746 ORTHO05D005863 4.4e-33 144.8 92 77.2
Oeu063393.2 Olea europaea HOM05D004746 ORTHO05D005863 4.4e-33 144.8 92 72.8
DCAR_018683 Daucus carota HOM05D004746 ORTHO05D005863 5.7e-33 144.4 92 75.0
Actinidia29088 Actinidia chinensis HOM05D004746 ORTHO05D005863 9.8e-33 143.7 92 73.9
MSTRG.10207 Avicennia marina HOM05D004746 ORTHO05D005863 1.3e-32 143.3 92 71.7
Migut.J00134 Erythranthe guttata HOM05D004746 ORTHO05D005863 1.7e-32 142.9 92 73.9
Hund10978 Selenicereus undatus HOM05D004746 ORTHO05D005863 2.2e-32 142.5 92 73.9
TWI74G1023 Tripterygium wilfordii HOM05D004746 ORTHO05D005863 2.2e-32 142.5 92 73.9
FAN17G1409 Fragaria x ananassa HOM05D004746 ORTHO05D005863 3.7e-32 141.7 92 77.2
Atru.chr8.2277 Acer truncatum HOM05D004746 ORTHO05D005863 4.9e-32 141.4 92 73.9
Sc01g0006870 Simmondsia chinensis HOM05D004746 ORTHO05D005863 4.9e-32 141.4 92 70.7
SGA_v2.0_scaffold85G26719 Striga asiatica HOM05D004746 ORTHO05D005863 4.9e-32 141.4 92 71.7
Actinidia11569 Actinidia chinensis HOM05D004746 ORTHO05D005863 6.3e-32 141.0 92 71.7
CSS0006394 Camellia sinensis var. sinensis HOM05D004746 ORTHO05D005863 6.3e-32 141.0 92 71.7
CSS0013285 Camellia sinensis var. sinensis HOM05D004746 ORTHO05D005863 6.3e-32 141.0 92 71.7
AUR62030473 Chenopodium quinoa HOM05D004746 ORTHO05D005863 6.3e-32 141.0 92 70.7
MD04G1000400 Malus domestica HOM05D004746 ORTHO05D005863 6.3e-32 141.0 92 70.7
THA.LOC104823290 Tarenaya hassleriana HOM05D004746 ORTHO05D005863 6.3e-32 141.0 97 69.1
FAN22G0460 Fragaria x ananassa HOM05D004746 ORTHO05D005863 8.3e-32 140.6 92 76.1
AUR62010444 Chenopodium quinoa HOM05D004746 ORTHO05D005863 1.1e-31 140.2 92 71.7
Duzib093G0324 Durio zibethinus HOM05D004746 ORTHO05D005863 1.8e-31 139.4 98 68.4
AT3G08960 Arabidopsis thaliana HOM05D004746 ORTHO05D005863 4.1e-31 138.3 97 68.0
Thecc.05G012200 Theobroma cacao HOM05D004746 ORTHO05D005863 4.1e-31 138.3 98 68.4
CARHR083300 Cardamine hirsuta HOM05D004746 ORTHO05D005863 7.0e-31 137.5 97 68.0
Duzib128G0341 Durio zibethinus HOM05D004746 ORTHO05D005863 9.2e-31 137.1 98 67.3
EL10Ac5g12532 Beta vulgaris HOM05D004746 ORTHO05D005863 1.6e-30 136.3 92 70.7
DCAR_015390 Daucus carota HOM05D004746 ORTHO05D005863 1.6e-30 136.3 92 68.5
AL3G19980 Arabidopsis lyrata HOM05D004746 ORTHO05D005863 2.0e-30 136.0 97 68.0
Aa31LG5G18930 Aethionema arabicum HOM05D004746 ORTHO05D005863 2.7e-30 135.6 97 64.9
Cfa017175 Carpinus fangiana HOM05D004746 ORTHO05D005863 2.7e-30 135.6 92 70.7
Carub.0003s0809 Capsella rubella HOM05D004746 ORTHO05D005863 4.5e-30 134.8 97 66.0
Cc06_g01090 Coffea canephora HOM05D004746 ORTHO05D005863 4.5e-30 134.8 92 68.5
Gorai.012G116700 Gossypium raimondii HOM05D004746 ORTHO05D005863 4.5e-30 134.8 92 69.6
PGR031G3962 Punica granatum HOM05D004746 ORTHO05D005863 5.9e-30 134.4 92 69.6
Nn2g10907 Nelumbo nucifera HOM05D004746 ORTHO05D005863 1.0e-29 133.7 92 68.5
Lj1g0027952 Lotus japonicus HOM05D004746 ORTHO05D005863 1.3e-29 133.3 92 69.6
Psat3g125960 Pisum sativum HOM05D004746 ORTHO05D005863 1.3e-29 133.3 92 68.5
BcaC05g29630 Brassica carinata HOM05D004746 ORTHO05D005863 1.7e-29 132.9 97 63.9
Ca_07663_v3 Cicer arietinum L. HOM05D004746 ORTHO05D005863 1.7e-29 132.9 92 68.5
Haze_21030 Corylus avellana HOM05D004746 ORTHO05D005863 1.7e-29 132.9 92 70.7
QL07p034923 Quercus lobata HOM05D004746 ORTHO05D005863 1.7e-29 132.9 92 69.6
arahy.Tifrunner.gnm1.ann1.R9K5QN Arachis hypogaea HOM05D004746 ORTHO05D005863 2.3e-29 132.5 92 68.5
arahy.Tifrunner.gnm1.ann1.U1NNDF Arachis hypogaea HOM05D004746 ORTHO05D005863 2.3e-29 132.5 92 68.5
A05p39880 Brassica napus HOM05D004746 ORTHO05D005863 2.3e-29 132.5 97 63.9
C05p58920 Brassica napus HOM05D004746 ORTHO05D005863 2.3e-29 132.5 97 63.9
BolC5t34545H Brassica oleracea HOM05D004746 ORTHO05D005863 2.3e-29 132.5 97 63.9
BraSC256t45936Z Brassica rapa HOM05D004746 ORTHO05D005863 2.3e-29 132.5 97 63.9
Gohir.D04G132800 Gossypium hirsutum HOM05D004746 ORTHO05D005863 2.3e-29 132.5 92 68.5
Ah.02g115550 Amaranthus hybridus HOM05D004746 ORTHO05D005863 2.9e-29 132.1 92 66.3
CiPaw.09G211600 Carya illinoinensis HOM05D004746 ORTHO05D005863 2.9e-29 132.1 92 70.7
PSO339G1342 Papaver somniferum HOM05D004746 ORTHO05D005863 2.9e-29 132.1 92 67.4
Ciclev10010971m.g Citrus clementina HOM05D004746 ORTHO05D005863 3.8e-29 131.7 92 68.5
Manes.09G106500 Manihot esculenta HOM05D004746 ORTHO05D005863 3.8e-29 131.7 92 68.5
TPR.G35441 Trifolium pratense HOM05D004746 ORTHO05D005863 3.8e-29 131.7 92 67.4
Phvul.008G095700 Phaseolus vulgaris HOM05D004746 ORTHO05D005863 6.6e-29 131.0 92 67.4
Sp3g07380 Schrenkiella parvula HOM05D004746 ORTHO05D005863 6.6e-29 131.0 97 63.9
VMungo1383G1310 Vigna mungo HOM05D004746 ORTHO05D005863 6.6e-29 131.0 92 67.4
Potri.016G119900 Populus trichocarpa HOM05D004746 ORTHO05D005863 8.6e-29 130.6 92 68.5
Gohir.A04G093500 Gossypium hirsutum HOM05D004746 ORTHO05D005863 1.1e-28 130.2 92 67.4
Medtr7g069460 Medicago truncatula HOM05D004746 ORTHO05D005863 1.1e-28 130.2 92 66.3
PSO801G0820 Papaver somniferum HOM05D004746 ORTHO05D005863 1.1e-28 130.2 92 66.3
Glyma.18G203900 Glycine max HOM05D004746 ORTHO05D005863 1.5e-28 129.8 92 66.3
Sabra16G0115800 Salix brachista HOM05D004746 ORTHO05D005863 1.5e-28 129.8 92 67.4
Eucgr.A00543 Eucalyptus grandis HOM05D004746 ORTHO05D005863 1.9e-28 129.4 92 64.1
Gorai.002G262500 Gossypium raimondii HOM05D004746 ORTHO05D005863 5.6e-28 127.9 90 71.1
Thhalv10019980m.g Eutrema salsugineum HOM05D004746 ORTHO05D005863 9.5e-28 127.1 97 63.9
Gohir.A01G226580 Gossypium hirsutum HOM05D004746 ORTHO05D005863 1.2e-27 126.7 90 71.1
Gohir.D01G216126 Gossypium hirsutum HOM05D004746 ORTHO05D005863 1.2e-27 126.7 90 71.1
Gohir.D01G216252 Gossypium hirsutum HOM05D004746 ORTHO05D005863 1.2e-27 126.7 90 71.1
BcaC01g04209 Brassica carinata HOM05D004746 ORTHO05D005863 1.6e-27 126.3 97 61.9
A03p36250 Brassica napus HOM05D004746 ORTHO05D005863 1.6e-27 126.3 97 61.9
C03p43890 Brassica napus HOM05D004746 ORTHO05D005863 1.6e-27 126.3 97 61.9
BolC3t16657H Brassica oleracea HOM05D004746 ORTHO05D005863 1.6e-27 126.3 97 61.9
Lalb_Chr19g0124371 Lupinus albus HOM05D004746 ORTHO05D005863 1.6e-27 126.3 92 65.2
BraA03t12796Z Brassica rapa HOM05D004746 ORTHO05D005863 2.1e-27 125.9 97 61.9
CANSAT56G3938 Cannabis sativa HOM05D004746 ORTHO05D005863 2.1e-27 125.9 92 66.3
MBI01_g40022_MAGBIO Magnolia biondii HOM05D004746 ORTHO05D005863 3.6e-27 125.2 92 62.0
Glyma.16G097152 Glycine max HOM05D004746 ORTHO05D005863 4.7e-27 124.8 92 65.2
Psat2g043480 Pisum sativum HOM05D004746 ORTHO05D005863 8.0e-27 124.0 92 62.0
HPP92_001120 Vanilla planifolia HOM05D004746 ORTHO05D005863 1.0e-26 123.6 99 58.6
Glyma.07G152800 Glycine max HOM05D004746 ORTHO05D005863 3.0e-26 122.1 92 65.2
Sed0023855 Sechium edule HOM05D004746 ORTHO05D005863 4.0e-26 121.7 92 63.0
ClCG05G011310 Citrullus lanatus HOM05D004746 ORTHO05D005863 8.9e-26 120.6 92 63.0
CsaV3_3G021150 Cucumis sativus L. HOM05D004746 ORTHO05D005863 8.9e-26 120.6 92 62.0
ECA236G1680 Erigeron canadensis HOM05D004746 ORTHO05D005863 8.9e-26 120.6 92 65.2
MELO3C020253.2 Cucumis melo HOM05D004746 ORTHO05D005863 1.2e-25 120.2 92 62.0
Aqoxy7G03079 Aquilegia oxysepala HOM05D004746 ORTHO05D005863 2.0e-25 119.4 92 59.8
Lsat_1_v5_gn_8_100840 Lactuca sativa HOM05D004746 ORTHO05D005863 2.0e-25 119.4 92 64.1
unitig_26.g9084 Utricularia gibba HOM05D004746 ORTHO05D005863 3.7e-24 115.2 92 60.9
HanXRQChr12g0383171 Helianthus annuus HOM05D004746 ORTHO05D005863 1.1e-23 113.6 90 63.3
ATR0681G361 Amborella trichopoda HOM05D004746 ORTHO05D005863 7.3e-20 100.9 92 50.0
Zm00001eb111960 Zea mays HOM05D004746 ORTHO05D005863 2.1e-19 99.4 92 48.9
SEGI_16247 Sequoiadendron giganteum HOM05D004746 ORTHO05D005863 8.0e-19 97.4 92 47.8
CDE08G1427 Ceratophyllum demersum HOM05D004746 ORTHO05D005863 1.8e-18 96.3 92 53.3
Os07g0693400 Oryza sativa ssp. japonica HOM05D004746 ORTHO05D005863 6.4e-16 87.8 94 45.7
Pp3c2_22550 Physcomitrium patens HOM05D004746 ORTHO05D005863 1.1e-12 77.0 93 45.2
AagrBONN_evm.TU.Sc2ySwM_362.215 Anthoceros agrestis HOM05D004746 ORTHO05D005863 4.3e-12 75.1 92 44.6
SMO241G0033 Selaginella moellendorffii HOM05D004746 ORTHO05D005863 9.5e-12 73.9 92 40.2
Pp3c14_210 Physcomitrium patens HOM05D004746 ORTHO05D005863 1.6e-11 73.2 93 41.9
Mapoly0056s0005 Marchantia polymorpha HOM05D004746 ORTHO05D005863 2.8e-11 72.4 93 40.9
SMO232G0101 Selaginella moellendorffii HOM05D004746 ORTHO05D005863 4.6e-06 55.1 76 39.5
CBR_g44565 Chara braunii HOM05D004746 ORTHO05D001702 7.8e-06 54.3 98 30.6


User provided reference genes

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