Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G497.82 Capsicum annuum HOM05D002672 ORTHO05D002887 5.7e-197 690.6 332 100.0
CAN.G960.51 Capsicum annuum HOM05D002672 ORTHO05D002887 7.3e-35 152.1 94 79.8
Solyc10g078520.2 Solanum lycopersicum HOM05D002672 ORTHO05D002887 1.6e-34 151.0 94 78.7
Sopen10g029170 Solanum pennellii HOM05D002672 ORTHO05D002887 1.6e-34 151.0 94 78.7
PGSC0003DMG400008367 Solanum tuberosum HOM05D002672 ORTHO05D002887 1.6e-34 151.0 94 78.7
Nitab4.5_0007223g0020 Nicotiana tabacum HOM05D002672 ORTHO05D002887 2.4e-33 147.1 94 76.6
Nitab4.5_0008228g0020 Nicotiana tabacum HOM05D002672 ORTHO05D002887 2.4e-33 147.1 94 76.6
Peaxi162Scf00003g04833 Petunia axillaris HOM05D002672 ORTHO05D002887 1.5e-32 144.4 94 74.5
Prupe.7G003300 Prunus persica HOM05D002672 ORTHO05D002887 2.2e-31 140.6 94 72.3
MD14G1002200 Malus domestica HOM05D002672 ORTHO05D002887 4.2e-30 136.3 94 69.1
Thecc.05G293600 Theobroma cacao HOM05D002672 ORTHO05D002887 4.2e-30 136.3 94 73.4
Cpa.g.sc51.101 Carica papaya HOM05D002672 ORTHO05D002887 1.2e-29 134.8 94 71.3
Duzib106G0634 Durio zibethinus HOM05D002672 ORTHO05D002887 2.7e-29 133.7 94 70.2
TWI74G0403 Tripterygium wilfordii HOM05D002672 ORTHO05D002887 2.7e-29 133.7 94 71.3
Phvul.001G109900 Phaseolus vulgaris HOM05D002672 ORTHO05D002887 4.6e-29 132.9 94 68.1
Sed0007674 Sechium edule HOM05D002672 ORTHO05D002887 4.6e-29 132.9 155 50.3
VMungo1383G1105 Vigna mungo HOM05D002672 ORTHO05D002887 4.6e-29 132.9 94 68.1
GSVIVG01033390001 Vitis vinifera HOM05D002672 ORTHO05D002887 4.6e-29 132.9 94 70.2
Duzib177G0497 Durio zibethinus HOM05D002672 ORTHO05D002887 7.8e-29 132.1 95 71.6
Glyma.16G041900 Glycine max HOM05D002672 ORTHO05D002887 7.8e-29 132.1 94 69.1
Cc00_g05140 Coffea canephora HOM05D002672 ORTHO05D002887 1.0e-28 131.7 95 73.7
FAN03G1589 Fragaria x ananassa HOM05D002672 ORTHO05D002887 1.0e-28 131.7 94 68.1
FAN06G3050 Fragaria x ananassa HOM05D003775 ORTHO05D004314 1.0e-28 131.7 94 68.1
PSO063G3245 Papaver somniferum HOM05D002672 ORTHO05D002887 1.0e-28 131.7 152 50.0
FAN01G0886 Fragaria x ananassa HOM05D003775 ORTHO05D004314 1.3e-28 131.3 103 63.1
PSO339G0446 Papaver somniferum HOM05D002672 ORTHO05D002887 2.3e-28 130.6 152 50.0
FAN26G1451 Fragaria x ananassa HOM05D002672 ORTHO05D002887 3.0e-28 130.2 94 67.0
Glyma.19G110500 Glycine max HOM05D002672 ORTHO05D002887 3.0e-28 130.2 94 67.0
MELO3C008797.2 Cucumis melo HOM05D002672 ORTHO05D002887 3.9e-28 129.8 94 67.0
CsaV3_4G013320 Cucumis sativus L. HOM05D002672 ORTHO05D002887 3.9e-28 129.8 94 67.0
FAN23G2462 Fragaria x ananassa HOM05D002672 ORTHO05D002887 3.9e-28 129.8 94 67.0
Lj1A1137T84 Lonicera japonica HOM05D002672 ORTHO05D002887 3.9e-28 129.8 94 70.2
Atru.chr2.1366 Acer truncatum HOM05D002672 ORTHO05D002887 5.1e-28 129.4 94 67.0
CiPaw.10G000600 Carya illinoinensis HOM05D002672 ORTHO05D002887 5.1e-28 129.4 94 68.1
FvH4_7g02040 Fragaria vesca HOM05D002672 ORTHO05D002887 5.1e-28 129.4 94 67.0
Oeu003210.1 Olea europaea HOM05D002672 ORTHO05D002887 5.1e-28 129.4 94 68.1
Haze_19412 Corylus avellana HOM05D003349 ORTHO05D003898 6.6e-28 129.0 94 69.1
arahy.Tifrunner.gnm1.ann1.53N7TD Arachis hypogaea HOM05D002672 ORTHO05D002887 8.7e-28 128.6 94 66.0
arahy.Tifrunner.gnm1.ann1.6BXT91 Arachis hypogaea HOM05D002672 ORTHO05D002887 8.7e-28 128.6 94 66.0
arahy.Tifrunner.gnm1.ann1.SA2BAT Arachis hypogaea HOM05D002672 ORTHO05D002887 8.7e-28 128.6 94 66.0
Dinv37010 Davidia involucrata HOM05D002672 ORTHO05D002887 8.7e-28 128.6 94 67.0
HanXRQChr03g0090411 Helianthus annuus HOM05D002672 ORTHO05D002887 8.7e-28 128.6 94 67.0
ClCG04G005270 Citrullus lanatus HOM05D002672 ORTHO05D002887 1.1e-27 128.3 94 66.0
Gohir.A11G258600 Gossypium hirsutum HOM05D002672 ORTHO05D002887 1.1e-27 128.3 95 69.5
CSS0007216 Camellia sinensis var. sinensis HOM05D002672 ORTHO05D002887 1.5e-27 127.9 94 68.1
Lalb_Chr14g0364451 Lupinus albus HOM05D002672 ORTHO05D002887 1.5e-27 127.9 94 66.0
HanXRQChr01g0024701 Helianthus annuus HOM05D002672 ORTHO05D002887 1.9e-27 127.5 94 67.0
Rhsim03G0001100 Rhododendron simsii HOM05D002672 ORTHO05D002887 5.6e-27 125.9 94 67.0
RcHm_v2.0_Chr3g0497201 Rosa chinensis HOM05D002672 ORTHO05D002887 5.6e-27 125.9 95 66.3
vmacro12572 Vaccinium macrocarpon HOM05D002672 ORTHO05D002887 5.6e-27 125.9 94 67.0
Nn2g15174 Nelumbo nucifera HOM05D002672 ORTHO05D002887 7.3e-27 125.6 94 63.8
TWI77G0420 Tripterygium wilfordii HOM05D002672 ORTHO05D002887 7.3e-27 125.6 94 67.0
Ciclev10021354m.g Citrus clementina HOM05D002672 ORTHO05D002887 9.6e-27 125.2 94 64.9
QL07p020088 Quercus lobata HOM05D002672 ORTHO05D002887 9.6e-27 125.2 87 67.8
Sabra13G0052300 Salix brachista HOM05D002672 ORTHO05D002887 9.6e-27 125.2 95 67.4
COL.COLO4_13611 Corchorus olitorius HOM05D002672 ORTHO05D002887 1.2e-26 124.8 89 73.0
FvH4_1g28050 Fragaria vesca HOM05D002672 ORTHO05D002887 2.1e-26 124.0 94 64.9
Gorai.007G288500 Gossypium raimondii HOM05D002672 ORTHO05D002887 2.1e-26 124.0 95 67.4
Lj1g0022931 Lotus japonicus HOM05D002672 ORTHO05D002887 2.1e-26 124.0 95 66.3
Haze_11185 Corylus avellana HOM05D002672 ORTHO05D002887 2.8e-26 123.6 87 69.0
Haze_11190 Corylus avellana HOM05D002672 ORTHO05D002887 2.8e-26 123.6 87 69.0
TAR623G0799 Trochodendron aralioides HOM05D002672 ORTHO05D002887 2.8e-26 123.6 89 65.2
Aa31LG2G1980 Aethionema arabicum HOM05D002672 ORTHO05D002887 4.7e-26 122.9 94 67.0
ECA285G0009 Erigeron canadensis HOM05D002672 ORTHO05D002887 4.7e-26 122.9 94 63.8
THA.LOC104823784 Tarenaya hassleriana HOM05D002672 ORTHO05D002887 6.2e-26 122.5 94 68.1
EL10Ac3g06813 Beta vulgaris HOM05D002672 ORTHO05D002887 1.4e-25 121.3 89 65.2
AUR62032684 Chenopodium quinoa HOM05D002672 ORTHO05D002887 1.8e-25 120.9 96 62.5
Psat3g089120 Pisum sativum HOM05D002672 ORTHO05D002887 1.8e-25 120.9 94 63.8
AUR62032064 Chenopodium quinoa HOM05D002672 ORTHO05D002887 2.4e-25 120.6 89 65.2
TPR.G5877 Trifolium pratense HOM05D002672 ORTHO05D002887 2.4e-25 120.6 94 62.8
FAN10G0774 Fragaria x ananassa HOM05D002672 ORTHO05D002887 3.1e-25 120.2 77 70.1
Gohir.D11G268700 Gossypium hirsutum HOM05D002672 ORTHO05D002887 3.1e-25 120.2 95 67.4
Potri.019G033800 Populus trichocarpa HOM05D002672 ORTHO05D002887 4.0e-25 119.8 95 65.3
Actinidia30558 Actinidia chinensis HOM05D002672 ORTHO05D002887 2.0e-24 117.5 136 48.5
Medtr7g085450 Medicago truncatula HOM05D002672 ORTHO05D002887 2.6e-24 117.1 94 61.7
Aqoxy2G00200 Aquilegia oxysepala HOM05D002672 ORTHO05D002887 3.4e-24 116.7 94 62.8
BcaC02g09472 Brassica carinata HOM05D002672 ORTHO05D002887 3.4e-24 116.7 94 66.0
C04p43190 Brassica napus HOM05D002672 ORTHO05D002887 3.4e-24 116.7 94 66.0
BolC4t25896H Brassica oleracea HOM05D002672 ORTHO05D002887 3.4e-24 116.7 94 66.0
Lsat_1_v5_gn_1_59540 Lactuca sativa HOM05D002672 ORTHO05D002887 3.4e-24 116.7 100 61.0
A04p09620 Brassica napus HOM05D002672 ORTHO05D002887 4.4e-24 116.3 94 66.0
BraA04t16621Z Brassica rapa HOM05D002672 ORTHO05D002887 4.4e-24 116.3 94 66.0
Potri.013G058800 Populus trichocarpa HOM05D002672 ORTHO05D002887 7.6e-24 115.5 97 62.9
DCAR_009678 Daucus carota HOM05D002672 ORTHO05D002887 9.9e-24 115.2 94 63.8
PGR042G0488 Punica granatum HOM05D002672 ORTHO05D002887 9.9e-24 115.2 171 41.5
PGR142G0008 Punica granatum HOM05D002672 ORTHO05D002887 9.9e-24 115.2 95 58.9
Sabra19G0041700 Salix brachista HOM05D002672 ORTHO05D002887 9.9e-24 115.2 95 64.2
SGA_v2.0_scaffold59G20726 Striga asiatica HOM05D002672 ORTHO05D002887 9.9e-24 115.2 94 61.7
Aqoxy1G00499 Aquilegia oxysepala HOM05D002672 ORTHO05D002887 1.3e-23 114.8 87 64.4
DCAR_016869 Daucus carota HOM05D002672 ORTHO05D002887 1.3e-23 114.8 87 64.4
BcaB06g26927 Brassica carinata HOM05D002672 ORTHO05D002887 1.7e-23 114.4 94 64.9
CANSAT78G2220 Cannabis sativa HOM05D002672 ORTHO05D002887 2.9e-23 113.6 95 63.2
Manes.08G150000 Manihot esculenta HOM05D002672 ORTHO05D002887 2.9e-23 113.6 95 63.2
MSTRG.27677 Avicennia marina HOM05D002672 ORTHO05D002887 3.8e-23 113.2 87 62.1
CiPaw.09G001400 Carya illinoinensis HOM05D002672 ORTHO05D002887 4.9e-23 112.8 94 61.7
Sc19g0006480 Simmondsia chinensis HOM05D002672 ORTHO05D002887 4.9e-23 112.8 96 60.4
Eucgr.A02091 Eucalyptus grandis HOM05D002672 ORTHO05D002887 1.1e-22 111.7 95 60.0
Sp7g07100 Schrenkiella parvula HOM05D002672 ORTHO05D002887 1.1e-22 111.7 165 44.2
CANSAT78G2266 Cannabis sativa HOM05D002672 ORTHO05D002887 1.4e-22 111.3 95 62.1
CARHR055500 Cardamine hirsuta HOM05D002672 ORTHO05D002887 1.4e-22 111.3 94 63.8
Ca_08259_v3 Cicer arietinum L. HOM05D002672 ORTHO05D002887 1.9e-22 110.9 94 59.6
Carub.0002s0957 Capsella rubella HOM05D002672 ORTHO05D002887 2.4e-22 110.5 94 63.8
Thhalv10003462m.g Eutrema salsugineum HOM05D002672 ORTHO05D002887 2.4e-22 110.5 94 63.8
AL1G64630 Arabidopsis lyrata HOM05D002672 ORTHO05D002887 3.2e-22 110.2 94 63.8
AT1G54390 Arabidopsis thaliana HOM05D002672 ORTHO05D002887 4.2e-22 109.8 94 63.8
CDE10G0711 Ceratophyllum demersum HOM05D002672 ORTHO05D002887 2.3e-20 104.0 94 54.3
HPP92_009426 Vanilla planifolia HOM05D002672 ORTHO05D002887 3.0e-20 103.6 94 56.4
ATR0697G210 Amborella trichopoda HOM05D002672 ORTHO05D002887 1.9e-19 100.9 168 42.9
CiPaw.13G158100 Carya illinoinensis HOM05D002672 ORTHO05D002887 1.9e-19 100.9 94 56.4
CDE10G0048 Ceratophyllum demersum HOM05D002672 ORTHO05D002887 2.5e-19 100.5 94 51.1
Migut.D01187 Erythranthe guttata HOM05D002672 ORTHO05D002887 3.3e-19 100.1 94 58.5
SHI00535 Sapria himalayana HOM05D002672 ORTHO05D002887 4.3e-19 99.8 121 48.8
Migut.C00472 Erythranthe guttata HOM05D002672 ORTHO05D002887 5.6e-19 99.4 87 59.8
Zm00001eb057160 Zea mays HOM05D002672 ORTHO05D002887 1.3e-18 98.2 95 55.8
DCAR_013691 Daucus carota HOM05D002672 ORTHO05D002887 1.6e-18 97.8 87 56.3
SEGI_38200 Sequoiadendron giganteum HOM05D002672 ORTHO05D002887 1.6e-18 97.8 143 42.7
Os03g0748200 Oryza sativa ssp. japonica HOM05D002672 ORTHO05D002887 3.1e-17 93.6 95 53.7
SMO116G0117 Selaginella moellendorffii HOM05D002672 ORTHO05D002887 4.9e-15 86.3 88 50.0
Pp3c17_17740 Physcomitrium patens HOM05D002672 ORTHO05D002887 4.6e-13 79.7 103 48.5
PGSC0003DMG402009541 Solanum tuberosum HOM05D000888 ORTHO05D000740 7.1e-06 55.8 32 84.4


User provided reference genes

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