Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G497.70 Capsicum annuum HOM05D006716 ORTHO05D008396 1.4e-119 433.0 221 100.0
Nitab4.5_0001339g0090 Nicotiana tabacum HOM05D006716 ORTHO05D008396 8.5e-56 221.1 220 56.4
Nitab4.5_0007530g0040 Nicotiana tabacum HOM05D006716 ORTHO05D008396 2.7e-54 216.1 219 54.8
CAN.G679.10 Capsicum annuum HOM05D001437 ORTHO05D001297 3.6e-54 215.7 213 59.2
Sopen02g027470 Solanum pennellii HOM05D006716 ORTHO05D008396 4.0e-53 212.2 217 53.9
Solyc02g082720.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 3.4e-52 209.1 217 53.0
Solyc02g082590.3 Solanum lycopersicum HOM05D006716 ORTHO05D008396 7.5e-52 208.0 219 53.9
Sopen02g027280 Solanum pennellii HOM05D006716 ORTHO05D008396 1.3e-51 207.2 208 54.3
Peaxi162Scf00168g01523 Petunia axillaris HOM05D006716 ORTHO05D008396 2.8e-51 206.1 202 57.9
Peaxi162Scf00663g00027 Petunia axillaris HOM05D006716 ORTHO05D008396 6.3e-51 204.9 210 52.9
Peaxi162Scf00475g00024 Petunia axillaris HOM05D006716 ORTHO05D008396 2.7e-49 199.5 218 51.8
CAN.G497.65 Capsicum annuum HOM05D006716 ORTHO05D008396 6.5e-48 194.9 215 53.5
Peaxi162Scf00475g00124 Petunia axillaris HOM05D006716 ORTHO05D008396 8.5e-48 194.5 219 50.7
TWI31G0239 Tripterygium wilfordii HOM05D006716 ORTHO05D008396 9.5e-47 191.0 214 49.5
Manes.S095408 Manihot esculenta HOM05D006716 ORTHO05D008396 4.0e-45 185.7 209 50.2
Peaxi162Scf00168g01520 Petunia axillaris HOM05D006716 ORTHO05D008396 1.2e-44 184.1 175 59.4
CAN.G497.60 Capsicum annuum HOM05D006716 ORTHO05D008396 8.3e-43 177.9 197 54.3
Peaxi162Scf00663g00009 Petunia axillaris HOM05D006716 ORTHO05D008396 4.0e-37 159.1 212 46.2
Peaxi162Scf00038g00840 Petunia axillaris HOM05D006716 ORTHO05D008396 3.4e-36 156.0 169 51.5
Peaxi162Scf00226g00716 Petunia axillaris HOM05D006716 ORTHO05D008396 7.8e-33 144.8 193 46.1
TPR.G36640 Trifolium pratense HOM05D006716 ORTHO05D008396 7.8e-33 144.8 213 44.6
SGA_v2.0_scaffold50G18515 Striga asiatica HOM05D006716 ORTHO05D008396 6.6e-32 141.7 225 42.2
TPR.G40231 Trifolium pratense HOM05D006716 ORTHO05D008396 8.6e-32 141.4 222 44.6
DCAR_002644 Daucus carota HOM05D006716 ORTHO05D008396 1.1e-31 141.0 203 43.8
Medtr5g464730 Medicago truncatula HOM05D006716 ORTHO05D008396 4.3e-31 139.0 181 49.2
TPR.G15037 Trifolium pratense HOM05D006716 ORTHO05D008396 1.6e-30 137.1 228 40.8
Ca_24998_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 1.8e-29 133.7 222 40.1
Medtr5g064160 Medicago truncatula HOM05D006716 ORTHO05D008396 6.8e-29 131.7 245 39.2
Hma1.2p1_0154F.1_g068000 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.5e-28 130.6 211 39.8
Hma1.2p1_0003F.1_g003570 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 4.4e-28 129.0 208 39.9
Ah.10g035270 Amaranthus hybridus HOM05D006716 ORTHO05D008396 9.8e-28 127.9 214 39.7
Ah.10g035350 Amaranthus hybridus HOM05D006716 ORTHO05D008396 9.8e-28 127.9 214 39.7
Hma1.2p1_0003F.1_g003620 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.3e-27 127.5 222 38.7
vmacro12389 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 2.2e-27 126.7 181 43.6
Peaxi162Scf00226g00715 Petunia axillaris HOM05D006716 ORTHO05D008396 2.9e-27 126.3 190 39.5
Aqoxy4G01949 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 8.3e-27 124.8 216 42.1
Aqoxy4G01948 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 1.1e-26 124.4 214 38.8
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 2.4e-26 123.2 215 40.5
Ah.10g035300 Amaranthus hybridus HOM05D006716 ORTHO05D008396 7.0e-26 121.7 179 41.9
CSS0009954 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 1.2e-25 120.9 213 39.0
Lj9A35T20 Lonicera japonica HOM05D006716 ORTHO05D008396 1.2e-25 120.9 181 41.4
Rhsim02G0098700 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.2e-25 120.9 176 43.8
Hma1.2p1_0310F.1_g120920 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.3e-24 117.5 174 44.3
CSS0050127 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 1.7e-24 117.1 214 38.8
Duzib114G0505 Durio zibethinus HOM05D006716 ORTHO05D008396 1.7e-24 117.1 185 39.5
Rhsim02G0098800 Rhododendron simsii HOM05D006716 ORTHO05D008396 3.9e-24 115.9 176 45.5
Ah.10g035360 Amaranthus hybridus HOM05D006716 ORTHO05D008396 5.0e-24 115.5 177 41.2
Rhsim01G0093700 Rhododendron simsii HOM05D000991 ORTHO05D008396 5.0e-24 115.5 173 42.2
vmacro15749 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 1.1e-23 114.4 212 38.7
Duzib114G0950 Durio zibethinus HOM05D006716 ORTHO05D008396 1.9e-23 113.6 185 38.9
vmacro12393 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 1.9e-23 113.6 185 41.1
Manes.11G055432 Manihot esculenta HOM05D006716 ORTHO05D008396 3.3e-23 112.8 112 54.5
Manes.04G051500 Manihot esculenta HOM05D006716 ORTHO05D008396 4.3e-23 112.5 112 55.4
SGA_v2.0_scaffold57G20300 Striga asiatica HOM05D006716 ORTHO05D008396 5.6e-23 112.1 173 43.4
SGA_v2.0_scaffold57G20303 Striga asiatica HOM05D006716 ORTHO05D008396 5.6e-23 112.1 206 40.3
vmacro15746 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 5.6e-23 112.1 145 45.5
DCAR_001924 Daucus carota HOM05D006716 ORTHO05D008396 9.5e-23 111.3 173 41.6
Rhsim01G0092600 Rhododendron simsii HOM05D006716 ORTHO05D008396 9.5e-23 111.3 166 42.2
Duzib114G0774 Durio zibethinus HOM05D006716 ORTHO05D008396 4.7e-22 109.0 166 41.0
Potri.018G001500 Populus trichocarpa HOM05D006716 ORTHO05D008396 1.8e-21 107.1 225 37.8
CAN.G497.57 Capsicum annuum HOM05D006716 ORTHO05D008396 2.6e-20 103.2 98 58.2
Rhsim09G0048400 Rhododendron simsii HOM05D006716 ORTHO05D008396 4.4e-20 102.4 206 36.4
vmacro15747 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 7.5e-20 101.7 141 44.7
Duzib114G0358 Durio zibethinus HOM05D006716 ORTHO05D008396 1.3e-19 100.9 227 33.9
Rhsim01G0092700 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.2e-19 100.1 211 37.0
Rhsim01G0093600 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.2e-19 100.1 176 40.9
Rhsim01G0093800 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.2e-19 100.1 211 37.0
DCAR_001902 Daucus carota HOM05D006716 ORTHO05D008396 6.4e-19 98.6 218 37.2
TPR.G29566 Trifolium pratense HOM05D006716 ORTHO05D008396 3.2e-18 96.3 183 37.7
Peaxi162Scf00226g00717 Petunia axillaris HOM05D006716 ORTHO05D008396 1.6e-17 94.0 136 44.1
Rhsim07G0026700 Rhododendron simsii HOM05D006716 ORTHO05D008396 3.5e-17 92.8 197 38.1
EL10Ac9g20945 Beta vulgaris HOM05D006716 ORTHO05D008396 4.6e-17 92.4 213 33.8
SGA_v2.0_scaffold237G43860 Striga asiatica HOM05D006716 ORTHO05D008396 1.0e-16 91.3 178 32.6
Potri.018G001550 Populus trichocarpa HOM05D006716 ORTHO05D008396 1.3e-16 90.9 187 37.4
Lj9A35T22 Lonicera japonica HOM05D006716 ORTHO05D008396 2.3e-16 90.1 220 34.1
vmacro12392 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 2.3e-16 90.1 145 34.5
TPR.G12759 Trifolium pratense HOM05D006716 ORTHO05D008396 1.4e-13 80.9 213 32.9
Peaxi162Scf01072g00410 Petunia axillaris HOM05D006716 ORTHO05D008396 1.5e-12 77.4 133 38.3
DCAR_024034 Daucus carota HOM05D006716 ORTHO05D008396 2.0e-12 77.0 202 29.2
Potri.018G001301 Populus trichocarpa HOM05D006716 ORTHO05D008396 3.4e-12 76.3 172 33.1
Ah.10g035290 Amaranthus hybridus HOM05D006716 ORTHO05D008396 8.4e-11 71.6 99 40.4
Os09g0436700 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 8.4e-11 71.6 156 32.7
Psat1g146440 Pisum sativum HOM05D006716 ORTHO05D008396 7.1e-10 68.6 76 55.3
DCAR_001904 Daucus carota HOM05D006716 ORTHO05D008396 1.2e-09 67.8 102 42.2
Ah.10g035280 Amaranthus hybridus HOM05D006716 ORTHO05D008396 4.6e-09 65.9 113 41.6
Ah.10g035200 Amaranthus hybridus HOM05D006716 ORTHO05D008396 6.0e-09 65.5 113 41.6
DCAR_010103 Daucus carota HOM05D006716 ORTHO05D008396 1.0e-08 64.7 111 40.5
PSO478G4756 Papaver somniferum HOM05D006716 ORTHO05D008396 3.0e-08 63.2 185 33.0
Os09g0436400 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 3.9e-08 62.8 98 36.7
Ah.08g210040 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.5e-07 60.8 187 26.7
Ca_25001_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 2.5e-07 60.1 78 39.7
Ca_25012_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 4.3e-07 59.3 109 36.7
Os07g0665700 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D018072 1.2e-06 57.8 116 31.9
Os07g0665300 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D018072 2.1e-06 57.0 92 34.8


User provided reference genes

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